ID MSK standard; circular genomic DNA; VRL; 2687 BP. XX AC K02026; XX SV K02026.1 XX DT 01-OCT-1996 (Rel. 49, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Maize streak virus, complete genome. XX KW coat protein; complete genome; unidentified reading frame. XX OS Maize streak virus OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX MEDLINE; 85126910. RX PUBMED; 6526009. RA Mullineaux P.M., Donson J., Morris-Krsinich B.A.M., Boulton M.I., RA Davies J.W.; RT "The nucleotide sequence of maize streak virus DNA"; RL EMBO J. 3(13):3063-3068(1984). XX CC Geminiviruses are characterised by twin isometric virions, major CC capsid polypeptides of about 28 kd, and ss-DNA genomes. The genomes CC of cassava latent virus (CLV) and tomato golden mosaic virus (TGMV) CC consist of two circular components, while that of maize streak CC virus (MSV) consists of a single circle. While CLV and TGMV show CC regions of homology, MSV doesn't appear to be similar to either of CC these [1]. CC [1] identifies the following additional open reading frames that CC would code for proteins with >10 kd: CC 2686-304 (through origin) CC 734-1030 CC 2374-1556 CC 1661-1200 CC 1007-387 CC 469-161 CC The virion-sense (+) strand is shown below. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /db_xref="taxon:10821" FT /mol_type="genomic DNA" FT /organism="Maize streak virus" FT variation 78 FT /note="g in one clone; c in other clone" FT variation 181 FT /note="a in one clone; c in other clone" FT CDS 315..1049 FT /codon_start=1 FT /note="coat protein" FT /protein_id="AAA46633.1" FT /translation="MSTSKRKRGDDSNWSKRVTKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAIDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT variation 332 FT /note="g in one clone; c in other clone" FT variation 564 FT /note="t in one clone; a in other clone" FT variation 1793 FT /note="t in one clone; g in other clone" XX SQ Sequence 2687 BP; 682 A; 635 C; 690 G; 680 T; 0 other; ggatccacag aacgccctgt attatcagcc gcgggtaccc acagcagctc cgacatccgc 60 aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cattgatttg 120 cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgaca 180 aggcagatcc acggaggagc tgatatttgg tggacaagct gtggatagga gcaaccctat 240 ccctaatata ccagcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg 300 ataagcattc agccatgtcc acgtccaaga ggaagcgggg agatgattcg aattggagta 360 agcgggtgac taagaagaag ccttcttcag ctgggctgaa gagggctggc agcaaggccg 420 ataggccatc cctgcaaatc cagacactcc agcacgctgg gaccaccatg ataacggtcc 480 cctccggagg agtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc 540 gccacaccag cgagactctg acgtacaaga tcgccatcga ctaccacttc gttgccgacg 600 cggcagcctg ccgctactcc aacaccggta ccggtgtaat gtggctggtg tatgacacca 660 ctcccggcgg acaagctccg accccgcaaa ctatatttgc ctaccctgac acgctgaaag 720 cgtggccggc cacatggaaa gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 gatggttgtt caacatggag accgacgggc gcattggttc ggatattcct ccctcgaatg 840 caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagt gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagcgc 960 tgtacatggt cattgccccc ggcaatggcc ttacttttac tgcccatggg cagacccgtc 1020 tgtactttaa gagtgttggc aaccagtaat gaataaaacg ccgtttttat tatatctgat 1080 gaatgctgaa agcttacatt aatatgtcgt gcgatggcac gaaaaacaca cacaatcaat 1140 acaggggggt agtcggcggg cggctaaggg tggtgctcgg cgggcagaac atcgaaaaat 1200 caagatctat ctgaatgtac tgcctccgta ggaggcagct cagggggaga ataccatttc 1260 tcccccggcg acataatgta aatgatgcag tttgcctcga aatactccag ctgccctgga 1320 gtcatttcct tcatccaatc ttcatccgag ttggcgagga ttattgtagg cttagacttc 1380 ttctgcacct ttttcttttt accatacttg gggtttacaa tgaaatccct ctgacagcca 1440 actaactgtt tccaacaagg acagaattta aacggaatat catctacgat gttatagatt 1500 gcgtcttcgt tgtatgaaga ccaatcaaca ttattttgcc agtaattatg aacccctagg 1560 cttctggccc aagtagattt tccggttctt gttgggccga cgatgtagag gctctgcttt 1620 cttgatcttt catctgatga ctggatacag aatccatcca ttggaggtca gaaattgcat 1680 cctcgagggt ataacaggta ggttgaagga gcatgtaagc ttcgggacta acctggaaga 1740 tgttaggctg gagccaatca ttgattgact cattacaaag taaatcaggt gatgagggtg 1800 gatgaggatt ggtgaactct tcctgaatct caggaaaaag cttatttgca gagtattcaa 1860 aatactgcaa ttttgtggac caatcaaagg gaagctcttt ctggatcatg gagaggtact 1920 cttctttgga agtagcgtgt gaaataatgt ctcgcattat ttcatcttta gaaggctttt 1980 tttcctttac ctctgaatca gattttccta ggaaggggga cttcctagga atgaaagtac 2040 ctctctcaaa cacagccaga ggttccttga gaatgtaatc cctcaccctg tttactgact 2100 tggcactctg aatatttggg tgaaacccat ttatatcaaa gaaccttgag tcagatatcc 2160 ttaccggctt ctctgtctga agcaatgcat gtaaatgcaa acttccatct ttatgtgcct 2220 ctcgggcaca tagaatgtat ttgggaatcc aacgaacaac gagctcccag atcatctgac 2280 aggcgatttc aggattttct ggacactttg gataggttag gaacgtgtta gcgttccggt 2340 gtgagaactg acggttggat gaggaggagg ccattgccga cgacggaggt tgaggctgag 2400 ggatggcaga ctgggagctc caaactctat agtatacccg tgcgccttcg aaatccgccg 2460 ctcccttgtc ttatagtggt tgcaaatggg ccggaccggg ccggcccagc aggaaaagaa 2520 ggcgcgcact aatattaccg cgccttcttt tcctgcgagg gcccggtagg gcccgagcga 2580 tttgatgtaa agtttggtcc tgctttgtat gatttatcta aagcagccca ttctaaagaa 2640 tccggtcccg gtcactataa attgcctaac aagtgcgatt cattcat 2687 //