ID   K01689; SV 1; linear; genomic RNA; STD; VRL; 2071 BP.
XX
AC   K01689;
XX
DT   07-NOV-1985 (Rel. 07, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 7)
XX
DE   Influenza C/California/78, hemagglutinin (seg 4), cDNA.
XX
KW   glycoprotein; haemagglutinin.
XX
OS   Influenza C virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Gammainfluenzavirus.
XX
RN   [1]
RP   1-2071
RX   PUBMED; 6699942.
RA   Nakada S., Creager R.S., Krystal M., Aaronson R.P., Palese P.;
RT   "Influenza C virus hemagglutinin: comparison with influenza A and B virus
RT   hemagglutinins";
RL   J. Virol. 50(1):118-124(1984).
XX
DR   MD5; d48cafdf8d6713d7d42cbe8bc2052096.
XX
CC   The location of the hemagglutinin gene was deduced by computer
CC   analysis of influenza C/Cal/78 and comparison with the
CC   organizations of influenzas B/Lee/40 and A/PR/8/43. The alignment
CC   of the amino acid sequence of the C virus HA remains tentative,
CC   since it is based solely on structural homologies. Plus strand is
CC   shown.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2071
FT                   /organism="Influenza C virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11552"
FT   CDS             22..1986
FT                   /codon_start=1
FT                   /note="hemagglutinin precursor (putative); putative"
FT                   /db_xref="GOA:A0A2C9NIC3"
FT                   /db_xref="InterPro:IPR001364"
FT                   /db_xref="InterPro:IPR003860"
FT                   /db_xref="InterPro:IPR007142"
FT                   /db_xref="InterPro:IPR008980"
FT                   /db_xref="InterPro:IPR014831"
FT                   /db_xref="UniProtKB/TrEMBL:A0A2C9NIC3"
FT                   /protein_id="AAA43791.1"
FT                   /translation="MFFSLLLMLGLTEAEKIKICLQKQVNSSFSLHNGFGGNLYATEEK
FT                   RMFELVKPKAGASVLNQSTWIGFGDSRTDQSNSAFPRSLMSAKTADKFRSLSGGSLMLS
FT                   MFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLNFQKSIYELASQSH
FT                   CMSLVNALDKTIPLQVTKGVAKNCNNSFLKNPALYTQEVKPLEQICGEENLAFFTLPTQ
FT                   FGTYECKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSG
FT                   DTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGPVTAVQSIWGKGRKSDYA
FT                   VDQACLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPF
FT                   TEEYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTTVTKPKSRIFGIDDLIIGLLF
FT                   VAIVEAGIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILRSSTNIAIEKLNDRISH
FT                   DEQAIRDLTLEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAV
FT                   EVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTIPPLDTKIDLQSDPFYWGSSLGLAIT
FT                   AANLMAALVISGIAICRTK"
FT   sig_peptide     22..63
FT                   /note="hemagglutinin signal peptide (putative); putative"
FT   mat_peptide     64..1356
FT                   /note="hemagglutinin HA1 chain (putative); putative"
FT   mat_peptide     1357..1983
FT                   /note="hemagglutinin HA2 chain (putative); putative"
XX
SQ   Sequence 2071 BP; 696 A; 381 C; 440 G; 554 T; 0 other;
     agcaaaagca ggggtttaat aatgtttttc tcattactct tgatgttggg cctcacagag        60
     gctgaaaaaa taaagatatg ccttcaaaag caagtgaaca gtagcttcag cctacacaat       120
     ggcttcggag gaaatttgta tgccacagaa gaaaaaagaa tgtttgagct tgttaagccc       180
     aaagctggag cctctgtctt gaatcaaagc acatggattg gctttggaga ttcaagaact       240
     gaccaaagca attcagcttt tcctaggtcg ctgatgtcag caaaaactgc tgataaattt       300
     cgttctttgt ctggtggatc cttgatgttg agtatgtttg gcccacctgg gaaggtagat       360
     tacctttacc aaggatgtgg aaagcataaa gttttttatg aaggagtcaa ctggagtcca       420
     catgctgcta tagattgtta cagaaaaaat tggactgaca tcaaactgaa tttccagaaa       480
     agcatttatg aattggcttc acaatcacat tgcatgagct tggtgaatgc cttggacaaa       540
     actattcctt tacaagtgac taaaggagtt gcaaaaaatt gcaacaacag cttcttaaaa       600
     aatccagcat tgtacacaca agaagtcaaa cctttagagc aaatatgtgg ggaagaaaat       660
     cttgcttttt tcacacttcc aacccaattt ggaacctatg agtgcaaact gcatcttgtg       720
     gcttcttgct atttcatcta tgatagcaaa gaagtgtaca ataaaagagg atgtggcaac       780
     tactttcaag tgatctatga ttcatctgga aaagttgttg gagggctaga taacagggta       840
     tcaccttaca cagggaattc tggagacact ccaacaatgc aatgtgacat gctccagctg       900
     aaacctggaa gatattcagt aagaagctct ccaagattcc ttttaatgcc tgaaaggagt       960
     tattgctttg acatgaaaga aaaaggacca gtcactgctg tccaatccat ctggggaaaa      1020
     ggcagaaaat ctgactatgc agtagatcag gcttgcttga gcactccagg gtgcatgttg      1080
     atccaaaagc aaaagccata cattggagag gctgatgatc accatggaga tcaagaaatg      1140
     agggagttgc tgtcaggact ggactatgaa gctagatgca tatcacaatc agggtgggtg      1200
     aatgaaacca gtccttttac ggaagaatac ctccttcctc ccaaatttgg aagatgtccc      1260
     ttggccgcaa aggaagaatc cattccaaaa atcccagatg gacttctaat tcccaccagt      1320
     ggaactgata ccactgtaac caaacctaaa agcagaattt ttggaatcga tgaccttatt      1380
     attggtctac tatttgttgc aattgttgaa gcaggaattg gaggctatct gcttggaagt      1440
     agaaaagaat caggaggagg tgtgacaaaa gaatcagctg aaaaagggtt tgaaaaaatt      1500
     ggaaatgaca tacaaatctt aagatcttct acaaatattg caatagaaaa actgaacgac      1560
     agaatttctc atgatgagca agccatcaga gatctaactt tagaaattga aaatgcaaga      1620
     tctgaagctc tattaggaga attgggaata ataagagcct tgctggtagg aaatataagc      1680
     ataggattac aagaatcttt atgggaacta gcttcagaaa taacaaatag agcaggagac      1740
     ctggcagtcg aagtctctcc aggttgctgg ataatcgaca ataacatttg tgatcaaagt      1800
     tgtcaaaact ttattttcaa gttcaacgaa actgcgcctg ttccaaccat tccccctctt      1860
     gacacaaaaa ttgatctgca atcagatcct ttttactggg gaagcagctt gggcttagca      1920
     ataactgctg ctaatctaat ggcagctttg gtgatctctg ggatcgccat ctgcagaact      1980
     aaatgatcag gacaattttg aaaaatggat aatatattag tcaatatttt gtacagcttt      2040
     ataaaaaaac aaaaaacccc ttgctactgc t                                     2071
//