Dbfetch

Dbfetch

ID   K01138; SV 1; linear; genomic RNA; STD; VRL; 751 BP.
XX
AC   K01138;
XX
DT   13-JUN-1985 (Rel. 06, Created)
DT   05-NOV-2005 (Rel. 85, Last updated, Version 4)
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DE   Simian rotavirus A/SA11 segment 10, complete sequence.
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KW   .
XX
OS   Simian rotavirus A/SA11
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A.
XX
RN   [1]
RP   1-751
RX   PUBMED; 6312090.
RA   Both G.W., Siegman L.J., Bellamy A.R., Atkinson P.H.;
RT   "Coding assignment and nucleotide sequence of simian rotavirus SA11 gene
RT   segment 10: location of glycosylation sites suggests that the signal
RT   peptide is not cleaved";
RL   J. Virol. 48(2):335-339(1983).
XX
RN   [2]
RP   1-751
RA   Mitchell D.B., Both G.W.;
RT   "Complete nucleotide sequence of Simian rotavirus";
RL   Unpublished.
XX
RN   [3]
RP   1-751
RA   Both G.W., Siegman L.J., Bellamy A.R., Atkinson P.H.;
RT   ;
RL   Submitted (03-AUG-1993) to the INSDC.
RL   Mathematical and Information Sciences, Commonwealth Scientific and
RL   Industrial Research Organisation (CSIRO), Locked Bag 17, North Ryde, NSW
RL   1670, Australia
XX
DR   MD5; 45132a9f629ba3c5456b2bafed8d7c38.
DR   EuropePMC; PMC87623; 11101582.
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FH   Key             Location/Qualifiers
FH
FT   source          1..751
FT                   /organism="Simian rotavirus A/SA11"
FT                   /segment="10"
FT                   /strain="SA11"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10923"
FT   CDS             42..569
FT                   /codon_start=1
FT                   /product="NCVP5 nonstructural glycoprotein"
FT                   /note="contains signal sequence that is not cleaved during
FT                   membrane translocation"
FT                   /db_xref="GOA:P04512"
FT                   /db_xref="InterPro:IPR002107"
FT                   /db_xref="PDB:1G1I"
FT                   /db_xref="PDB:1G1J"
FT                   /db_xref="PDB:2O1K"
FT                   /db_xref="UniProtKB/Swiss-Prot:P04512"
FT                   /protein_id="AAA47291.1"
FT                   /translation="MEKLTDLNYTLSVITLMNNTLHTILEDPGMAYFPYIASVLTGLFA
FT                   LNKASIPTMKIALKTSKCSYKVVKYCIVTIFNTLLKLAGYKEQITTKDEIEKQMDRVVK
FT                   EMRRQLEMIDKLTTREIEQVELLKRIYDKLTVQTTGEIDMTKEINQKNVRTLEEWESGK
FT                   NPYEPREVTAAM"
FT   misc_feature    63..71
FT                   /note="potential; glycosylation site"
FT   misc_feature    93..101
FT                   /note="potential; glycosylation site"
XX
SQ   Sequence 751 BP; 268 A; 131 C; 171 G; 181 T; 0 other;
     gggttttaaa agttctgttc cgagagagcg cgtgcggaaa gatggaaaag cttaccgacc        60
     tcaattatac attgagtgta atcactctaa tgaacaatac attgcacaca atacttgagg       120
     atccaggaat ggcgtatttt ccttatatag catctgtctt aacaggtttg tttgcgctaa       180
     ataaagcatc cattccaaca atgaaaattg cattgaaaac gtcaaaatgt tcatataaag       240
     tggtgaaata ttgtattgta acaattttta atacgttgtt aaaattggca ggttataaag       300
     agcagataac tactaaagat gagatagaaa agcaaatgga cagagtagtc aaagaaatga       360
     gacgccagct agaaatgatt gacaaattga ctacacgtga aattgaacaa gtagagttgc       420
     ttaaacgcat ttacgataaa ttgacggtgc aaacgacagg cgaaatagat atgacaaaag       480
     agatcaatca aaaaaacgtg agaacgctag aagaatggga aagtggaaaa aatccttatg       540
     aaccaagaga agtgactgca gcaatgtaag aggttgagct gccgtcgact gtcctcggaa       600
     gcggcggagt tctttacagt aagcaccatc ggacctgatg gctgactgag aagccacagt       660
     cagccatatc gcgtgtggct caagccttaa tcccgtttaa ccaatccggt cagcaccgga       720
     cgttaatgga aggaacggtc ttaatgtgac c                                      751
//