ID   K00610; SV 1; linear; genomic RNA; STD; VRL; 984 BP.
XX
AC   K00610;
XX
DT   13-JUN-1985 (Rel. 06, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   La Crosse virus S RNA, complete, coding for the N and NS-s proteins.
XX
KW   NS-s protein; nucleocapsid protein; protein N.
XX
OS   La Crosse virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Peribunyaviridae; Orthobunyavirus; La Crosse orthobunyavirus.
XX
RN   [1]
RP   60-129
RX   DOI; 10.1016/0092-8674(83)90021-1.
RX   PUBMED; 6871993.
RA   Patterson J.L., Cabradilla C., Holloway B.P., Obijeski J.F., Kolakofsky D.;
RT   "Multiple leader RNAs and messenger RNAs are transcribed from the La Crosse
RT   virus small genome segment";
RL   Cell 33(3):791-799(1983).
XX
RN   [2]
RP   1-984
RX   PUBMED; 6834480.
RA   Akashi H., Bishop D.H.L.;
RT   "Comparison of the sequences and coding of La Crosse and snowshoe hare
RT   bunyavirus S RNA species";
RL   J. Virol. 45(3):1155-1158(1983).
XX
DR   MD5; 58698b8ae1e2e99de05277170998fe75.
DR   EuropePMC; PMC165340; 12843078.
DR   EuropePMC; PMC2774246; 19748425.
DR   EuropePMC; PMC5362992; 28330505.
XX
CC   The 3' and 5' ends of the RNA are complementary in sequence.  There
CC   are four methionine codons in the second reading frame (bp 101-103;
CC   104-106; 125-127; 140-142) any of which could be used to initiate
CC   the NS-s protein.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..984
FT                   /organism="La Crosse virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11577"
FT   CDS             82..789
FT                   /codon_start=1
FT                   /note="N protein"
FT                   /db_xref="GOA:P04873"
FT                   /db_xref="InterPro:IPR001784"
FT                   /db_xref="PDB:4BGP"
FT                   /db_xref="PDB:4BHH"
FT                   /db_xref="UniProtKB/Swiss-Prot:P04873"
FT                   /protein_id="AAA42782.1"
FT                   /translation="MSDLVFYDVASTGANGFDPDAGYMDFCVKNAESLNLAAVRIFFLN
FT                   AAKAKAALSRKPERKANPKFGEWQVEVINNHFPGNRNNPIGNNDLTIHRLSGYLARWVL
FT                   DQYNENDDESQHELIRTTIINPIAESNGVGWDSGPEIYLSFFPGTEMFLETFKFYPLTI
FT                   GIHRVKQGMMDPQYLKKALRQRYGTLTADKWMSQKVAAIAKSLKDVEQLKWGKGGLSDT
FT                   AKTFLQKFGIRLP"
FT   CDS             101..379
FT                   /codon_start=1
FT                   /note="NS-s protein"
FT                   /db_xref="GOA:P04874"
FT                   /db_xref="InterPro:IPR000797"
FT                   /db_xref="UniProtKB/Swiss-Prot:P04874"
FT                   /protein_id="AAA42783.1"
FT                   /translation="MMSHQQVQMDLILMQGIWTSVLKMQNHSTLLQLGSSSSMPQRPRL
FT                   LSRVSQRGRLTLNLESGRWRLSIIIFLETGTTQLVTTILPSTDYLGI"
XX
SQ   Sequence 984 BP; 313 A; 177 C; 227 G; 267 T; 0 other;
     attagtgtac tccacttgaa tactttgaaa ataaattgtt gttgactgtt ttttacctaa        60
     ggggaaatta tcaagagtgt gatgtcggat ttggtgtttt atgatgtcgc atcaacaggt       120
     gcaaatggat ttgatcctga tgcagggtat atggacttct gtgttaaaaa tgcagaatca       180
     ctcaaccttg ctgcagttag gatcttcttc ctcaatgccg caaaggccaa ggctgctctc       240
     tcgcgtaagc cagagaggaa ggctaaccct aaatttggag agtggcaggt ggaggttatc       300
     aataatcatt ttcctggaaa caggaacaac ccaattggta acaacgatct taccatccac       360
     agattatctg ggtatttagc cagatgggtc cttgatcagt ataacgagaa tgatgatgag       420
     tctcagcacg agttgatcag aacaactatt atcaacccaa ttgctgagtc taatggtgtg       480
     ggatgggaca gtgggccaga gatctatcta tcattctttc caggaacaga aatgtttttg       540
     gaaactttca aattctaccc gctgaccatt ggaattcaca gagtcaagca aggcatgatg       600
     gaccctcaat acctgaagaa ggccttaagg caacgctatg gcactctcac agcagataag       660
     tggatgtcac agaaggttgc agcaattgct aagagcctga aggatgtaga gcagcttaaa       720
     tggggaaaag gaggcctgag cgatactgct aaaacattcc tgcagaaatt tggcatcagg       780
     cttccataaa tatggcatga ggcattcaaa ttaggttcta aattctaaat ttatatatgt       840
     caatttgatt aattggttat ccaaaagggt tttcttaagg gaacccacaa aaatagcagc       900
     taaatgggtg ggtggtaggg gacagcaaaa aactataaat caggtcataa ataaaataaa       960
     atgtattcag tggagcacac tact                                              984
//