ID   JX994211; SV 1; linear; genomic RNA; STD; VRL; 1801 BP.
XX
AC   JX994211;
XX
DT   23-JAN-2013 (Rel. 115, Created)
DT   22-APR-2015 (Rel. 124, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate miryang segment 10, complete
DE   sequence.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1801
RX   DOI; 10.1016/j.jviromet.2013.07.008.
RX   PUBMED; 23850700.
RA   Cho S.Y., Jeong R.D., Yoon Y.N., Lee S.H., Shin D.B., Kang H.W., Lee B.C.;
RT   "One-step multiplex reverse transcription-polymerase chain reaction for the
RT   simultaneous detection of three rice viruses";
RL   J. Virol. Methods 193(2):674-678(2013).
XX
RN   [2]
RP   1-1801
RA   Cho S.-Y., Yoon Y.-N., Shin D.B., Han S.S., Lee B.C.;
RT   ;
RL   Submitted (23-OCT-2012) to the INSDC.
RL   Crop Environmental Research, National Institute of Crop Science, Rural
RL   Development Administration, 125, Seodun-Dong Gwonseon-Gu, Suwon,
RL   Gyeonggi-Do 441-857, Republic of Korea
XX
DR   MD5; 00cf975079c8d67da840257ec8c4c711.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1801
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="rice"
FT                   /isolate="miryang"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10990"
FT   CDS             22..1698
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:L7VW18"
FT                   /protein_id="AGC69732.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNSDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   GVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLNIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKGATNTSTTVKKVKIHFSVQYFDEFKVNGHEKSIVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
XX
SQ   Sequence 1801 BP; 579 A; 335 C; 323 G; 564 T; 0 other;
     aagttttttt cctcacccat aatggctgac ataagactcg acatagcgcc cgatcttatc        60
     cataatggtg taccccagag actttccgat acaataattt taaacaaccg accaacaatc       120
     actctgttat ctcatttcaa caatctattt catgaattaa acattgtcaa agcgccccac       180
     gttgcatctt cccaaactac cgttaatttg tacattcgca aacatttgtt gacccgactt       240
     catgatagac tacaaaccgt agaaactagc actttaccca acatcacgca acttaaagac       300
     cacattcgca gtttctttca aaatgaacac caacccattt ttcagaccct aacgaacagc       360
     gacctaagcg aagaatttgt aggtgtgact acttttggac taagcttatt tgctacctcc       420
     aaacttgatg ctgaacaaat agaacgtgtg caaattgaga ccttaactga aggaaacatt       480
     acgttgaagc ccttttccgc tgatggttta ggagtcattc tcgatgatag ttatattggt       540
     atagttggca aaattccagg tttagaagtt cataaattgt tagataaatg ttgtcgtgaa       600
     gttcctgctc aaatgggaat acttactgat gaagttaaac ttttgatgcg tactggtaaa       660
     ttaagaattg atggtggtta cgatttcaat tgtcctgcaa gcactacaga tgttacacac       720
     tacggtggtt atgatcaatt ttcgcgtcaa atgttcgaac gtttgaatct tttttataat       780
     attagtctta acataattcc cgtttcagct ttaaaaacag ttcatttatt cgaaaaagaa       840
     ttaagtgttt tggatgcaga caaatcttta ctcgaacaga cttggagcgc agtagcgtca       900
     tttgttgaaa cctggcaagt taaatctaaa gttaaagctg atgatcctga tgaatacgaa       960
     ctgaccagtt tgtccacttt gcgtactaat tatgatggta cttctacttc tagccctttt      1020
     acagataaga aattcattga ctggtatatt aagacttttt ctaagactga aaaaggatcg      1080
     tctttacgtc gaaatgaatt agaagagaaa ggtgccacta atacttcaac tacagtaaag      1140
     aaggttaaaa ttcatttctc tgttcaatat tttgacgaat ttaaagttaa tggacacgaa      1200
     aaaagcattg tagttcaaac tcataaaggt gaaatgacac tagattatta tcgtaaaatt      1260
     ggcgaagtat taagtgcgat ttggaaacgt ggtaaatctt tggctgtacc ttgttttgat      1320
     tacattaaac ttggcgttga aaaagcattt catttggcac ccgtaattat gaagaagtat      1380
     aacttgacga tcgacgatat tatcaacttc attgataaag gaccttccta tttggctaag      1440
     ttggacaaaa ttgatgattg gtctctgatt tcaaagctta ttattaccag tgttttacct      1500
     aacattattc aagctgttta taaaaccgat ccaagtaata atgttatgaa ctcagtaatt      1560
     atcagtagag cgaacaactt gttgaaatct gatagggaca ggctattaaa gaaggcactt      1620
     tccgccaacg tttcttcctc caatacttct agtcatgagc atacacagaa gatagtatta      1680
     aacaaagtga caagatgacc actggaagta catcattagt gcgactagtt cagtgctgtg      1740
     cgatcttcag ttcattatcg atgccgagtg acgacggcta gggggaaatt cagctattgt      1800
     c                                                                      1801
//