ID   JX993911; SV 1; linear; genomic RNA; STD; VRL; 2223 BP.
XX
AC   JX993911;
XX
DT   21-NOV-2012 (Rel. 114, Created)
DT   21-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Am segment RNA 3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2223
RA   Niu Y., Zhao H.;
RT   ;
RL   Submitted (21-OCT-2012) to the INSDC.
RL   College of Life Sciences, Shanxi Agricultural University, Mingxian Road,
RL   Taigu, Shanxi 030801, China
XX
DR   MD5; 92a29a96dbfcfb2a876dd0053a9dae7a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2223
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA 3"
FT                   /host="Atractylodes macrocephala Koidz"
FT                   /isolate="Am"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="01-Oct-2011"
FT                   /proviral
FT                   /db_xref="taxon:12305"
FT   CDS             125..964
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:K7XP56"
FT                   /protein_id="AFX68427.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNRQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNMESSQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFESFRPQVVNGL"
FT   CDS             1265..1921
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K7WY64"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:K7WY64"
FT                   /protein_id="AFX68428.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLTLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAIYAMFADGASPVLVYQYAASGVQAN
FT                   NKLLHDLSAMRADIGDMGKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2223 BP; 507 A; 538 C; 541 G; 637 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccacacc ccttttcttt tcagtgtgtt agaatacccg       120
     aggcatggct ttccaaggta ccagcaggac tttaacccaa cagtcctcag cggcaacgtc       180
     tgacgaactt cagaagatat tatttagccc tgatgccatt aagaaaatgg ctgctgagtg       240
     tgacctaggc cggcatcatt ggatgcgcgc tgataatgca atttcagtcc ggcccctcgt       300
     tcccgaagta acccacggtc gtattgcttc cttcttcaag tctggatatg acgctggtga       360
     attgtgctct aaaggataca tgagcgtccc tcaggtgttg tgtgctgtta ctcgaacagt       420
     ttctaccgat gctgaagggt ctttgagaat ttacctagct gatttaggcg acaaggagct       480
     atctcctata gataagcagt gcgtcacatt acataaccat gatctccccg ctttagtgtc       540
     tttccaaccg acgtatgatt gtcctatgga gacagttggg aatcggaagc ggtgttttgc       600
     tgttgtcatt gaaagacatg gttatattgg gtataccggt accacagcta gcgtgtgtag       660
     taatcggcaa gcacggtttt cttctaagaa taacaactac actcatatcg cagctgggaa       720
     gactctagta ctgccattca acagattagc tgagcaaacg aaaccgtcag ccgtcgcccg       780
     cctgttgaag tcgcaattga ataacatgga atcttcgcaa tacgtcttga cggattcgaa       840
     gattaatcaa aatgcgcgca gtgagtccga ggaattaaat gttgagagcc ctcccgccgc       900
     aatcgggagt tcttccgcgt cccgcttcga atccttcaga ccgcaggtgg ttaacggtct       960
     ttagcgcttt cgttgcgtat tagtatataa gtatatgtga gtctgtacat aatactatat      1020
     ctatagtgtc ctgtgtgggt tgatacagta gacaactgtg acgcgatgtc gtgttgagaa      1080
     gggaacacat ctggttcttg taagccacat cattagtttt gaggttcaat tcctcttgct      1140
     ccctgttgtg ccccttactt tttcatgggt gcttctcccg acgaaattgc gtttcgtcta      1200
     ctggatctta agagagtttg tgttgtgttt tctccttttg tgtcgtagat atttgagtcg      1260
     agtcatggac aaatctgaat caaccagtgc tggtcgtaac cgtcgacgtc gtccgcgtcg      1320
     tggttcccgc tccgcttcct cctccgcgga tgccaacttt agggtcctgt cgcagcaact      1380
     ttcgcgactt aacaagacgt tggcagctgg tcgtcctacc attaaccacc caacctttgt      1440
     ggggagtgaa cgttgtaaac ctgggtacac gttcacatct attaccctga agccaccgaa      1500
     aatagaccgc gggtcttatt atggtaaaag gttgacatta cctgattcag tcacggaatt      1560
     cgataagaag cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc      1620
     taccgtgtgg gtgacagtcc gtaaagttcc tgcctcctcg gacttgtccg tcgccgccat      1680
     ctatgctatg tttgcggacg gagcctcacc ggtactggtt tatcagtatg ctgcatccgg      1740
     agtccaagct aacaataagt tgttgcatga tctttcggcg atgcgcgctg atattggcga      1800
     catgggaaag tacgccgtac tcgtgtattc aaaagacgat gcactcgaga cggatgagct      1860
     ggtacttcat gtcgacattg agcaccaacg cattcccaca tctggggtgc tcccagtttg      1920
     aatccgtggt tcccagaacc ctccctccaa ttttctgagg cgggagctga gttggcagtt      1980
     ctgctacaaa ctgtctgaag tcgctaaacg tttttacggc gaacgggttg tccatccagc      2040
     taacggctaa aatggtcagt cgtggagaaa tccacgccga aggacttaca agtcttcgag      2100
     gcacctttga aaccatctcc tagattcctt cggaaggact tcggtccatg tacttctagc      2160
     acaagatgct agtttcaggg tacgggtgcc ctccactttg taggagcctc cttcaggaga      2220
     cca                                                                    2223
//