ID JX993910; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC JX993910; XX DT 21-NOV-2012 (Rel. 114, Created) DT 21-NOV-2012 (Rel. 114, Last updated, Version 1) XX DE Cucumber mosaic virus isolate Am segment RNA 2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RA Niu Y., Zhao H.; RT ; RL Submitted (21-OCT-2012) to the INSDC. RL College of Life Sciences, Shanxi Agricultural University, Mingxian Road, RL Taigu, Shanxi 030801, China XX DR MD5; 736843498e0a11804661207bbd3a35d4. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus" FT /segment="RNA 2" FT /host="Atractylodes macrocephala Koidz" FT /isolate="Am" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="01-Oct-2011" FT /proviral FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:K7WZ78" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K7WZ78" FT /protein_id="AFX68425.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVPEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKSFEDLVAAIYTKSDFYYDNEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPLLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPAHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDHMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNVDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLGID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGAKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFNCVELRIERSSSTKQRKKKDGIERRRNDKRRTPTGSYGGGEEAETKVSQAEST FT GTRSQKSQREGAFKSQAVPLPTILSSRWFGTDRDVPPCEHGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:K7WSK6" FT /protein_id="AFX68426.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYHHVNMVGLSESEAPCFTLPAAEDHDFDDTDWFAGN FT EWAEGSF" XX SQ Sequence 3049 BP; 748 A; 698 C; 729 G; 874 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tctttcttat ggctttcccc gcccccgctt tctcactagc caatcttttg 120 aatggtagtt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcctg tcgtaattac aggcccttac ccgctgtgga tgtcagcgag 240 agtgtcccag aggatgcgca ttccctccga actccagacg gagctccctc cgaagaggtg 300 tctgtagagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacaactgtg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gccatggcca gggctttgct attagcaccc 480 agaacatccc accgaaccat gaagagtttt gaggacctgg tcgcggctat ttacactaaa 540 tccgatttct actacgataa tgagtgtgaa gccgacgacg ttcagataga tatctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga tttcaatgct 720 ttaaagaaat cgtgcgctga gaggacattc gctgatgatt atgttatcga aggtttagat 780 ggtgttgtag acaatgcgac tctgttgtcg aatttaggcc cgcttttggt gcctgtgaaa 840 tgtcagtatg agaaatgtcc aacacccacc gttgcgaatc ctccgagtct taatcgtgct 900 actgatcgtg ttgatatcaa tttagttcag tccatttgtg actcgactct gcccgctcat 960 agtaactacg acgactcttt tcatcaagtg ttcgtcgaga gtgctgacta ttctattgat 1020 ctggatcatg ttagacttcg ccagtctgat cttattgcaa aaatcccaga ttcagggcat 1080 atgataccgg ttttgaacac cgggagcggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcta tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaacctg 1200 tccagattga gtaaggctgt ggctgagaga ttcttcattt catacattaa tggtaactct 1260 ctagcatcca gcaactttgt taatgtcgtt agcaacttcc acgatcacat ggaaaaatgg 1320 aagtcctcag gtctttcgta tgatgatctt ccggatcttc atgctgaaaa tttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaaa cctgtagtga gcgacacact caacgttgac 1440 agaccggttc cggctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttgtttactg cgctatttga gcgtttccag agatgccttc gagaacgcat tattcttcct 1560 gttggaaaga tttcatccct tgagatggca ggatttgatg ttaagaacaa gcactgtctc 1620 gggattgatt tgtccaaatt cgacaagtct caaggtgaat tccatctaat gattcaggaa 1680 cacattttga atggtctagg gtgcccagct cctataacta agtggtggtg tgatttccac 1740 agattctctt atattagaga ccgtagagct ggcgttggta tgcccatcag ttttcagaga 1800 cgaactggtg atgcattcac ctacttcggt aacaccattg tcaccatggc tgaatttgca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtac ttcctcctgt tggtgatccg agtaagttca cgactctctt caacatggaa 1980 gctaaggtga tggagcccgc agtaccatat atttgttcga agttcctact ctctgacgag 2040 ttcggtaaca ctttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggcgcgaag 2100 aaaatcccct attcagacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc tctcttcttc 2220 gagttgaaat acaggaagtc tggggccgag gctgctttaa tgttaggcgc ctttaagaaa 2280 tataccgcta atttccagtc ctataaagaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttaattg tgtagagtta aggattgagc gttcgagttc cactaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactggc 2460 tcgtatggtg gaggcgaaga ggcagagacg aaggtctcac aagcagaatc gacgggaacg 2520 aggtcacaaa agtcccagcg agagggcgcg ttcaaatctc aggctgttcc gcttcctacc 2580 attctatcaa gtagatggtt cggaactgat agagatgtac caccatgtga acatggtggg 2640 attgtccgag tctgaggccc cttgttttac gttgccagcg gcagaagacc atgatttcga 2700 cgatacggat tggttcgctg gtaacgagtg ggcggaaggg tcgttctgaa cctccccttc 2760 ctaatctccc tccggttttc tgaggcggga gctgagttgg cagtattgct acaaactgtc 2820 tgaagtcgct aaacgttttt acggcgaacg ggttgtccat ccagctaacg gctaaaatgg 2880 tcagtcgtgg agaaatgcac gccaacgaag ttacaagtct tcgaggcacc gttaccacca 2940 tttcctaggt ttcttcggaa ggacttcggt ccgtgtactt ctagcacaat gtgctagttt 3000 cagggtacgg gtgtcccccg ctctgcgggg gtcctcctaa aggagacca 3049 //