ID JX982137; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC JX982137; XX DT 23-JAN-2013 (Rel. 115, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate XN01 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Tang Y.F., He Z.F.; RT "Molecular characterization of tomato yellow leaf curl begomoviruses in RT China"; RL Unpublished. XX RN [2] RP 1-2739 RA Tang Y.F., He Z.F.; RT ; RL Submitted (17-OCT-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; f8f15bd8f73c0536de7c36689d0433a0. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="XN01" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Z.F. He" FT /collection_date="30-May-2012" FT /db_xref="taxon:196093" FT gene 132..473 FT /gene="AV2" FT CDS 132..473 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q09M62" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q09M62" FT /protein_id="AGC54446.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J7H724" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J7H724" FT /protein_id="AGC54445.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDITRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:L7UU88" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L7UU88" FT /protein_id="AGC54449.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHIQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFRYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVIKGTIDAQFSHIIKFKIY" FT gene complement(1207..1614) FT /gene="AC2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:L7UXM6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L7UXM6" FT /protein_id="AGC54448.1" FT /translation="MRNSTPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTAHPETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT gene complement(1514..2602) FT /gene="AC1" FT CDS complement(1514..2602) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:L7UU46" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L7UU46" FT /protein_id="AGC54447.1" FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNKRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGIFQVDGRSTRGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPLEVYISPFNFSSFDQVPRELVKWVAENVRDSAARPWRPMSIVVEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFNTLTEPL FT YSRANQGPTQNSEEETNSQAEG" FT gene complement(2152..2445) FT /gene="AC4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:L7UQX4" FT /protein_id="AGC54450.1" FT /translation="MGLLTCTFSSNSKENSNVKIKDSSTSHPQPGQHISIRTFRELRAQ FT QMSKPIWRKTETCLIMEFSRSMEDQLEEVANLQTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2739 BP; 724 A; 537 C; 607 G; 871 T; 0 other; accggatggc cgcgaatttt tttagtgggt cctacgcact aatgttggtc ggccaataga 60 aacgctccct caaagcttat taacaaaaat atccgttata aatacttggt ggctaagtta 120 cagtcggtaa aatgtgggat ccactgttaa atgattttcc agagtctgta catggtctac 180 ggtgtatgct tgccattaag tatctacatc ttgtagaaaa tacatattcc ccggatactt 240 tgggttacga tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 300 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg tctgaacttc 360 gccagcccat atggcaaccg tgtagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcccc gtggttgtga aggcccatgt aaggtacagt catttgagca gcgtcatgat 540 atatctcatg tgggcaaggt attatgtgtg tccgatatca cacgtggtaa tgggctgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagtactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgtcgattc 840 caggctacgg tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata cgataaccat 960 acagaaaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaactgagc atcgattgtg ccctttatta cattgtatag tacatgtctc 1140 attgctctaa atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1200 tggtacctaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gttccgtaga aatggtctct ggatgtgctg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca 1500 tccacaagga agatcaaccc tccgcctgcg aattggtctc ttcttcgcta ttttgtgttg 1560 gaccttgatt ggcacgtgag tagagtggct cggtgagggt gttgaattcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg atcgacgtca tcaatgacgt tataccatgc ctcattgctg tacactcttg 1860 ggcttaggtc aagatgacca cacaagtaat tgtgtgggcc tagagacctg gcccaaagtg 1920 tcttcccagt acgactctca ccctctacaa caatactcat gggtctccat ggccgcgcag 1980 cggaatccct cacgttctcg gcaacccatt ttacaagttc tcttggaact tgatcaaatg 2040 aagaaaaatt aaaaggagaa atataaacct ccaatggagg tgtaaaaatt ctatctaaat 2100 tactatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc ctcaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg tttgcagatt 2220 ggcaacctcc tctagttgat cttccatcga cctggaaaat tccatgatca agcacgtctc 2280 cgtctttctc catataggtt ttgacatctg ttgagctctt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa tcttttattt ttacattgga 2400 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg tgaagctctc 2460 tgcaaaccct aatgaatagc ttatttgttg gggtttgtag agcttgtatt tgggaaagtg 2520 cctcttcttt ggttagggag cagtgtggat acgtgaggaa gtagttcttt gcatttatcc 2580 tgaatttatt aagtggaggc atgttgactt agtcaattgg tgtctctcaa acttctctat 2640 gtatcggtgt ctggggtctt atttatactt ggacactaaa tggcatttat gtaattacat 2700 taatttacca aggggtaaag cggccatccg tttaatatt 2739 //