ID JX971983; SV 1; linear; genomic RNA; STD; VRL; 2354 BP. XX AC JX971983; XX DT 22-APR-2013 (Rel. 116, Created) DT 01-SEP-2013 (Rel. 118, Last updated, Version 2) XX DE Crimson clover cryptic virus 2 isolate IPP_IncarnatSK segment RNA 2, DE complete sequence. XX KW . XX OS Crimson clover cryptic virus 2 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2354 RX DOI; 10.1007/s00705-013-1691-x. RX PUBMED; 23584419. RA Lesker T., Rabenstein F., Maiss E.; RT "Molecular characterization of five betacryptoviruses infecting four clover RT species and dill"; RL Arch. Virol. 158(9):1943-1952(2013). XX RN [2] RP 1-2354 RA Lesker T., Maiss E.; RT ; RL Submitted (15-OCT-2012) to the INSDC. RL Institute of Plant Diseases and Plant Protection, Gottfried Wilhelm Leibniz RL University Hannover, Herrenhaeuser Str. 2, Hannover 30149, Germany XX DR MD5; 2300ec48d896eda223599cc5c0759d10. XX CC GenBank Accession Numbers JX971982-JX971983 represent the complete CC genome of Crimson clover cryptic virus 2 isolate IPP_IncarnatSK. CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2354 FT /organism="Crimson clover cryptic virus 2" FT /segment="RNA 2" FT /host="Trifolium incarnatum" FT /isolate="IPP_IncarnatSK" FT /mol_type="genomic RNA" FT /country="Germany" FT /collection_date="2011" FT /db_xref="taxon:1323528" FT CDS 96..2120 FT /codon_start=1 FT /product="coat protein" FT /note="75.4 kDa" FT /db_xref="GOA:M9VR17" FT /db_xref="UniProtKB/TrEMBL:M9VR17" FT /protein_id="AGJ83770.1" FT /translation="MTTNSSNARLNKLKNNTVPLPFNATEVPEPATDLLTSMKENTSAH FT SATANQWTIDLFPNMIPVLIHVMSAASHHANAINFREHSKTSAATVAMYHMAVVYGYFL FT LNDLNIRLNPSAHARSWAEASWKSEFVEFLYGLPVPEFLAPILSEYQHFVTDKTPNVHF FT TPSAAGFDHDQFFGRVFPLNMFAALHDSTATLPSSSTYAQVLQDLFSRPLYTITDPAFT FT CYLPDLLGITLTAGENVTTLNYINSKLYQVFTTIFNPVLFRDHQRRSSLAALSFKSPTY FT PNPNINAYDLLFSASVANLREIKIVLQSIYKLFDGRVACKHTLSQFICESTSPSITKHG FT YSTFPLPTWSHTESDAKAIRFSGVTALVHVSEEDRAQDFCFLQRPAEAIPHVNEVPDIR FT YATTEDPETAVPLPANHILVRRFPFAIRLRQEAANGFPRHDNDDLTKFSDHVHTAPRVL FT ILDTTGDGIISAHTTTASGKIIESFELDGSTIEMPNADKSLGMQNCLFADSAIAYKYVR FT PGSFYRPRTQGSVLPPLNRAPPNSRPRLPASSMLHDRTKVFLPQLNTRINEAVDIRTLP FT GLTMLNNVNCINYAQSFIGFKTVDATRNDDVLDAVPGMPLNNLILWSPYTYTAYEDETY FT PDPVFSNSRHYYLTNLRTIFGTDTNLIKAVHPYEAYPVS" XX SQ Sequence 2354 BP; 626 A; 639 C; 353 G; 736 T; 0 other; agatttattt aaagccgccc caagctctaa atattaagaa ttcacattcg tctaagttat 60 caagttctca caaaacctct gctctaatta tcaagatgac taccaactca tcaaacgccc 120 gactcaataa gctgaagaat aacactgttc ctcttccttt caatgctact gaagtccctg 180 aacccgctac tgacctcctc acttctatga aggagaatac ttctgctcac tctgctactg 240 ctaatcaatg gaccatcgat ctctttccca acatgattcc tgtcctaatc cacgttatgt 300 ctgctgcctc acaccatgct aacgcgatta actttcgtga acactcgaag acctctgctg 360 ctactgttgc catgtaccat atggccgtcg tttatggata cttccttttg aatgatctga 420 acattcgtct caatccttcc gctcacgccc gatcctgggc tgaagcctca tggaaatctg 480 aatttgttga attcctctac ggtttgcccg ttcctgaatt ccttgcccca attttatctg 540 aataccagca ttttgtcact gacaaaacac caaatgtcca ctttacacca tctgctgctg 600 gatttgacca tgaccaattt tttggacgcg ttttccctct gaatatgttt gctgccctgc 660 atgatagtac tgctactcta cctagtagtt ctacatatgc tcaagtctta caagacctat 720 ttagtagacc tttgtacaca atcactgatc ctgcctttac ctgttacctc cctgaccttc 780 ttggaataac tctcactgct ggagaaaatg ttaccacctt gaattatatt aattcaaaat 840 tgtaccaagt tttcactact atattcaatc ccgttttgtt ccgcgatcac caacgtcgct 900 cctcacttgc tgcactttca ttcaagtccc ccacctaccc taatccaaat atcaatgctt 960 atgatttact gttttctgcc tctgtcgcca atctgcgcga aattaagata gttctacagt 1020 ctatttataa attgttcgat ggaagagttg cttgtaaaca cactttaagt cagtttatct 1080 gcgaatccac ttccccgtca attacaaagc acgggtactc caccttcccg ctccctactt 1140 ggagccacac tgaatccgac gcgaaagcaa tccgcttttc cggcgtcact gcccttgttc 1200 atgtgtctga agaagataga gcccaagatt tttgcttttt acaacgccct gctgaagcta 1260 tccctcatgt taatgaagtc cccgatatcc gctatgccac cactgaagat cctgaaactg 1320 ctgttcctct ccctgcgaac cacatccttg ttcgccgctt tccattcgca attcgtttgc 1380 gtcaagaagc tgcaaatggc tttcctcgcc atgataatga tgatctcaca aaattttctg 1440 accatgtgca tacagctccc cgcgttttaa ttctcgatac tactggtgac ggaatcattt 1500 ccgcccacac caccactgct tctggcaaaa taattgaatc cttcgaacta gatggatcaa 1560 caattgaaat gccaaatgct gacaagagcc taggtatgca aaactgcctc tttgctgatt 1620 ctgccattgc ctataaatat gtccgtcctg gatcctttta ccgtccacga acacaaggct 1680 ccgtcctacc tccactcaat cgagctcccc ctaattcaag gcctcgcctc cctgcatctt 1740 ccatgctcca tgatcgtact aaggtatttt tacctcagtt gaacacccgt atcaatgaag 1800 ctgttgacat ccgcaccctt cccggtctca ctatgctgaa taatgtcaat tgtatcaact 1860 atgctcaatc ctttattgga tttaaaactg ttgatgccac taggaatgat gacgtcctgg 1920 atgctgtccc tggaatgccc ctgaataacc tgattctctg gtctccttat acctacactg 1980 cttatgagga tgaaacctat cctgatcccg ttttcagtaa ttcccggcac tactacttga 2040 ccaacctccg taccatcttt ggtactgaca ccaatttgat caaggccgtc cacccctatg 2100 aagcctaccc cgtctcttaa gtgattactc cttttttcct ttatttatta aagtttctgt 2160 ttaatctatt ttcttttgat gacaatcacg tgtatgctac gtgattcttt tgtttcgttt 2220 tatttaatga acttttctgt ttgttttttt tagtcgttat tttctttaaa gaaaaaaaaa 2280 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaat taaaaataaa acaaaaaccc 2340 aaaaaaagtt cccc 2354 //