ID JX971981; SV 1; linear; genomic RNA; STD; VRL; 2349 BP. XX AC JX971981; XX DT 22-APR-2013 (Rel. 116, Created) DT 01-SEP-2013 (Rel. 118, Last updated, Version 2) XX DE Hop trefoil cryptic virus 2 isolate IPP_GelbSK segment RNA 2, complete DE sequence. XX KW . XX OS Hop trefoil cryptic virus 2 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2349 RX DOI; 10.1007/s00705-013-1691-x. RX PUBMED; 23584419. RA Lesker T., Rabenstein F., Maiss E.; RT "Molecular characterization of five betacryptoviruses infecting four clover RT species and dill"; RL Arch. Virol. 158(9):1943-1952(2013). XX RN [2] RP 1-2349 RA Lesker T., Maiss E.; RT ; RL Submitted (15-OCT-2012) to the INSDC. RL Institute of Plant Diseases and Plant Protection, Gottfried Wilhelm Leibniz RL University Hannover, Herrenhaeuser Str. 2, Hannover 30149, Germany XX DR MD5; 200de34c71c46574e9898dc1a92ce718. XX CC GenBank Accession Numbers JX971980-JX971981 represent the complete CC genome of Hop trefoil cryptic virus 2 isolate IPP_GelbSK. CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2349 FT /organism="Hop trefoil cryptic virus 2" FT /segment="RNA 2" FT /host="Medicago lupulina" FT /isolate="IPP_GelbSK" FT /mol_type="genomic RNA" FT /country="Germany" FT /collection_date="2011" FT /db_xref="taxon:1323523" FT CDS 91..2112 FT /codon_start=1 FT /product="coat protein" FT /note="75.4 kDa" FT /db_xref="GOA:M9VUB0" FT /db_xref="UniProtKB/TrEMBL:M9VUB0" FT /protein_id="AGJ83768.1" FT /translation="MSTEETAPQTKAIKNQNVVLSFEDGKPPGPVSDFMSLFRSNSCAH FT TDTANQWIIDVFPNMTPILMYVMTKAQHHSEATDYRLHSKSSVFTICMYYMSIIYGYFL FT LNDLHSRPTQSAHARNWVENSWKSSFAKFLMTLPVPEFLLPILAQFHPFNTDRTKNVFF FT SPSAAGFDHDQFFGRVYPLNMFAVIHDCTATLPGNSTRTQVLQDLFSKVLYTVNAPGFT FT CLIPDLFGLTLDQTVNTTVNYMNSRLYQVFSSLFNPVLFRDSQRRSSLAALSFTPPTYT FT TNHINAYDYMFAAYPANLRELQVVLQSVSAIIKDVAECKIPLGTYVADYSSPSIIHHGY FT SSYALPTWSHSETEQKVDRFENATTFNLVTEDARAQDICFLQRPTQAIPHEHNVTDLIF FT TAAGAPDTDIPLPANHAIVRRFPFCLRLDAPAENGFPRHDNEDLVKFSDDTHSAPGVLV FT LDTIGDGVLSAHLPTLTGKIIESFELDGSTIEMPDVRKSLGMQNCMFADSAVAYKYVRP FT GSYWHPRAAGSTLPPLNRAPPNSRPRLPASSLLHDRTKVMLPQLNVRINAALNDNALPG FT LTRVTPVNVVRYTQSFLGFRTVDSSNNAANLDAVPGMTEGLLMLWSPYTYTPYESGDYP FT FADLSASRHYYLTNLRTIFGTDYNLVSVKHPYEAFPVV" XX SQ Sequence 2349 BP; 590 A; 658 C; 370 G; 731 T; 0 other; agatttttct aaagcggccc cgctagaaat taagaattca cattcgtcta cattatcaag 60 ttttcctgaa cctctgctct aatccttaag atgtctactg aagaaactgc tcctcagact 120 aaggcaatca agaaccaaaa tgttgtcctc tcctttgaag atggaaaacc acctggtccc 180 gtctctgact tcatgtcttt gttccgctca aactcttgtg cacacactga tactgctaat 240 caatggatca ttgatgtttt ccctaacatg actcccattc tcatgtacgt catgaccaaa 300 gcccaacacc attctgaagc tactgactat cgtctccact ccaagtcatc tgtcttcacc 360 atctgtatgt actacatgtc catcatttat ggctacttct tgttgaatga tttacattcc 420 cgccccactc aatctgccca tgctcgcaac tgggttgaga actcttggaa atcctccttt 480 gctaagttcc ttatgacact tcccgtgcct gaatttctgc ttcccatcct tgctcagttc 540 cacccattca ataccgacag gactaagaat gttttcttta gtccctccgc tgctggattt 600 gaccatgacc aattctttgg ccgtgtctat cctttgaaca tgtttgctgt aatccatgac 660 tgcactgcta ccctccctgg taattctacc agaacccaag tcctacaaga ccttttctca 720 aaggtcctat acactgttaa cgcccctggt ttcacttgtc tgattcctga tctatttggt 780 cttaccctcg atcaaacagt taacaccact gttaattaca tgaattccag actttaccaa 840 gtcttttcat cactgtttaa tcccgtgtta ttccgcgact ctcagcgccg ctcatccctt 900 gctgcactct ctttcacccc gcctacatat acaaccaatc atattaatgc atatgactac 960 atgtttgctg cctatcctgc aaatctccgt gaattgcaag ttgtcctcca atccgtctct 1020 gccattatta aagatgttgc tgaatgtaag atacccctcg gtacctatgt tgctgattat 1080 tcttctccat ccattatcca ccatggatac tcctcctatg ctctcccaac ttggtcccat 1140 tctgagaccg aacaaaaagt tgaccgattt gaaaatgcta ccactttcaa tctcgtcact 1200 gaagatgcaa gagcccaaga tatctgtttt ctccaacgcc ccactcaagc tatcccacat 1260 gaacacaatg tgactgatct catattcacc gctgctggcg ctcctgatac cgacattccc 1320 ctgcctgcta atcatgcaat cgttcgtcga tttccgttct gcctccgcct tgatgcccct 1380 gctgaaaatg gcttccctcg ccatgacaat gaagatttag ttaagttttc tgatgatacc 1440 cacagtgccc ctggcgttct agtcctcgat accatcggtg atggtgtact ctctgctcac 1500 ctcccgactc tcactggaaa aataatcgag tcatttgaac tcgatggttc cacaatcgaa 1560 atgcctgatg taaggaaatc actcggcatg caaaactgca tgttcgctga ctctgccgtc 1620 gcatataaat atgtgcgccc tggctcctac tggcaccctc gcgccgctgg atctactctt 1680 cctccactga atcgagctcc acccaattct cgtccccgtc tcccggcttc gtctctgctc 1740 catgatagaa ccaaagttat gctgcctcaa ctcaatgttc ggattaatgc tgctctcaat 1800 gacaatgctc tccctggtct tacccgtgtt acgcctgtca atgttgtccg ctacacccaa 1860 tctttccttg gattccgcac agttgatagt tccaataatg ctgcaaacct cgatgctgtc 1920 cccgggatga ctgaaggtct tctgatgctc tggtctccct acacatacac tccgtatgag 1980 tctggtgatt atccattcgc tgatctcagt gcttctaggc actattatct gaccaacctc 2040 cgtaccatct ttggtactga ctacaacttg gtttcagtta agcatcccta tgaagctttc 2100 cctgtcgttt aagcaattac tctctttcct ttaatgcaat ttaaagtttt tgatgtttaa 2160 ttggtttcct ttaatgacaa tcgcgtgtat actacgcggt tcttttgttt cgtttttctt 2220 ctgaactttt tagttcagcg ttttcaacgt tgttttctgt ttatgaaaaa aaaaaaaaaa 2280 aaataaaaaa aaaaaaaaaa ataaaaaaaa aaaaaaaaaa aaaaaaaaca aaaaataaaa 2340 aagttccct 2349 //