ID JX971977; SV 1; linear; genomic RNA; STD; VRL; 2348 BP. XX AC JX971977; XX DT 22-APR-2013 (Rel. 116, Created) DT 01-SEP-2013 (Rel. 118, Last updated, Version 2) XX DE White clover cryptic virus 2 isolate IPP_Lirepa segment RNA 2, complete DE sequence. XX KW . XX OS White clover cryptic virus 2 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2348 RX DOI; 10.1007/s00705-013-1691-x. RX PUBMED; 23584419. RA Lesker T., Rabenstein F., Maiss E.; RT "Molecular characterization of five betacryptoviruses infecting four clover RT species and dill"; RL Arch. Virol. 158(9):1943-1952(2013). XX RN [2] RP 1-2348 RA Lesker T., Maiss E.; RT ; RL Submitted (15-OCT-2012) to the INSDC. RL Institute of Plant Diseases and Plant Protection, Gottfried Wilhelm Leibniz RL University Hannover, Herrenhaeuser Str. 2, Hannover 30149, Germany XX DR MD5; 138fedfb4683117c089af36373bfe6fa. XX CC GenBank Accession Numbers JX971976-JX971977 represent the complete CC genome of White clover cryptic virus 2 isolate IPP_Lirepa. CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2348 FT /organism="White clover cryptic virus 2" FT /segment="RNA 2" FT /host="Trifolium repens cv. Lirepa" FT /isolate="IPP_Lirepa" FT /mol_type="genomic RNA" FT /country="Germany" FT /collection_date="2011" FT /db_xref="taxon:1323525" FT CDS 92..2113 FT /codon_start=1 FT /product="coat protein" FT /note="75.6 kDa" FT /db_xref="GOA:M9VTV3" FT /db_xref="UniProtKB/TrEMBL:M9VTV3" FT /protein_id="AGJ83764.1" FT /translation="MSPDENPTLNKTPKNQTVELVFQDTKVPVPSDNFMESIRSNAAAH FT TDTANQWIIDVFPNMTPILLYVMHYTHLYAQATEYRIHAKSSVYTLCMYFMTIVYGYFL FT LNDIYTRPARSVHARIWIESSWRSEFVKFLTTLPVPDILKPILSQFHPFTTARTKNVFF FT CPSAAGFDHDQFFGRTYPMNMFAAIHDCTATLPGNSTRTDVFRDLYSRILYSITTPAYT FT CVIPDLIGATPDQTTRTTINFMNSRLYQTFNSLFNPVLFRDSQRRAALAALSFTAPTYP FT TNHINAYDYLFSATAPNLRELKIVIQSVIACSKGVFDVSGTLGSYVSDYSSSSIVHHGY FT STYPLPVWSHTDDATKPQTFTAATIFQLVTEDARAQDICFLQRPAAEIAHTRRITDLTY FT ASTATPTVPATMPANHGIFRIWPYCLRCDNDAENGFPRHDNEDLVAYSDEIHTAPSVLV FT LDTPGDTVISAHMPTVVGKVIESFELDGSTIAMPDARKSLAMQNCMFADSAIAYKYVRP FT GSYWRPRAAGSILPPLNRALPTARPRLPASSLLHDRTKVFLPQLNAHVNAIPENNLLPG FT FTQLTPVNVIRYVQPFFGFHTVDRTANDAALDAVPGMAEGHLMIWSPYTYNPYESDDYP FT PVALDASRHYYLTNLRTIFGTDYNLVSVKHIYESYPAV" XX SQ Sequence 2348 BP; 590 A; 616 C; 367 G; 775 T; 0 other; agattattct taatcggccc ccgaaagaat ttaagaattc acattcgtct atattatcaa 60 gtttttacac aacctctgct ctaattccaa gatgtctcct gatgagaacc ccactctcaa 120 caagacccct aagaaccaaa ctgttgaact cgtttttcaa gataccaaag ttcccgttcc 180 ctctgataac ttcatggaat caatccgctc taacgctgct gctcacactg acactgctaa 240 tcagtggatc attgatgttt tcccaaacat gactccaata cttctgtacg ttatgcatta 300 tactcactta tatgctcaag ctactgaata tcgcattcat gccaaatcat ctgtttacac 360 tttgtgtatg tatttcatga ctattgtcta tggatacttc ttgctgaatg atatctacac 420 ccgccctgcg cggtctgttc atgcccgtat ttggattgaa tcttcctgga gatctgaatt 480 tgtcaaattt ctgacgactc ttcccgtccc agatattctt aaacccattc tgtctcagtt 540 ccatcctttc actactgcta gaactaaaaa tgtgttcttt tgcccctctg ctgctggatt 600 tgatcatgac caattttttg gccgtactta tcctatgaat atgttcgctg ctattcacga 660 ctgcactgct acacttcctg gtaactctac cagaactgat gtttttcgtg atttgtactc 720 aagaattctg tattctataa ctactcctgc ttatacttgc gttattcctg acttgattgg 780 tgctaccccc gatcaaacaa cccgaacaac gataaacttt atgaactcaa ggctctacca 840 aacctttaac tctctgttta atcctgttct tttccgcgac tcccagcgcc gtgctgctct 900 tgctgccctc tcatttactg ctcctactta cccgactaac catatcaatg catatgatta 960 cctgttctct gcaaccgccc caaatcttag agaactaaag attgttatac aatctgtgat 1020 tgcatgctcc aaaggtgttt ttgatgtttc cggaacactc ggatcttatg tttctgatta 1080 ttcctcttcc tcaattgtcc atcatggtta ctctacgtat ccactccctg tctggtctca 1140 taccgatgat gccaccaaac cgcaaacctt cactgctgcc acaattttcc aactggtcac 1200 tgaagatgcc agagctcaag atatctgctt cctccaacgc cctgctgctg agattgccca 1260 cactcgtcgt atcactgatt tgacttatgc ttcaactgct actcccactg ttccagctac 1320 aatgcctgca aatcatggta tatttcgaat ttggccctac tgtctccgct gtgacaatga 1380 tgccgaaaat ggcttccctc gtcacgacaa tgaagatctc gtcgcttact ctgatgagat 1440 tcacactgct ccaagcgttc ttgtcctcga tacccctggt gatactgtta ttagtgccca 1500 tatgcctacc gttgtcggta aggtaattga gtcttttgaa ctcgatggct ctacaatcgc 1560 aatgcctgat gctagaaaat cacttgccat gcaaaactgc atgtttgctg actctgccat 1620 tgcttacaag tatgttcgtc ctggatccta ctggcgccct cgtgctgctg gttccatcct 1680 gccacctctt aatcgagccc tccctactgc tcgcccccgt ttaccagctt cctccttgct 1740 tcatgacaga actaaggttt tcctacctca gttgaatgct catgttaacg ctattcctga 1800 aaataatctg cttcctggat ttactcagtt gactcctgtt aatgtcattc gctatgtcca 1860 gcccttcttc ggttttcaca ctgttgatcg tactgctaat gatgctgctc ttgatgctgt 1920 tcccggtatg gctgaaggcc atttgatgat ctggtcccca tacacttaca atccgtatga 1980 gtctgatgat tatcctcccg tcgcccttga tgcgtctaga cactactacc tgactaatct 2040 gcgtaccatt tttggtactg actacaatct tgttagtgtc aaacacatct atgaatccta 2100 ccccgctgtc taagtgatta ctctcctttt cttttaatta aagtttaaaa gtttttgatg 2160 tttaatcgtt ttctttccag cgaacacgcc tacactgcgt ggttcttttg tttcgtttta 2220 attttatgaa cttttgttta tgtttttttc aacgttgttt tcttattaag aaaaaaaaaa 2280 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaacaaa caaaaaataa 2340 aaaacccc 2348 //