Dbfetch
ID JX961673; SV 1; circular; genomic DNA; STD; VRL; 2787 BP. XX AC JX961673; XX DT 28-OCT-2012 (Rel. 114, Created) DT 28-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Sweet potato leaf curl virus isolate Muan-GE21, complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2787 RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.; RT "Sweet potato leaf curl virus"; RL Unpublished. XX RN [2] RP 1-2787 RA Kwak H.R., Kim M.K., Kim J.D., Jung M.N., Lee S.C., Choi H.S.; RT ; RL Submitted (11-OCT-2012) to the INSDC. RL Crop Protection, National Academy of Agricultural Science, RDA, Suin-ro RL 126th, Gwonseon-gu, Suwon, Gyeonggi-do 441-707, Republic of Korea XX DR MD5; a104fef5b775ad8fa1337a1c2a09fc41. XX FH Key Location/Qualifiers FH FT source 1..2787 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="Muan-GE21" FT /mol_type="genomic DNA" FT /country="South Korea" FT /collection_date="2011" FT /db_xref="taxon:100755" FT gene 91..432 FT /gene="AV2" FT CDS 91..432 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:K4N2B9" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:K4N2B9" FT /protein_id="AFV36767.1" FT /translation="MDLWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCS FT DLIRILRVKQYGRANSRFSEISSLWGETGKTETELRDSYRALHWECCPNCCPKLCPGFS FT KRPDEEKEG" FT gene 257..1021 FT /gene="AV1" FT CDS 257..1021 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A0A165RJ04" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A165RJ04" FT /protein_id="AFV36768.1" FT /translation="MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRSVQMKRRKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFSQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1038..1472) FT /gene="AC3" FT CDS complement(1038..1472) FT /codon_start=1 FT /gene="AC3" FT /product="transcriptional enhancer protein" FT /db_xref="GOA:K4N2R2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K4N2R2" FT /protein_id="AFV36769.1" FT /translation="MDSRTGESLSHAQTMRAVEFFDNPMSVGRTAPFYLKCLYAHQSVA FT GRTILKFQLQVNHRERKQLGFHKIFLQFRIITTRLTGVIHSWTGILTRLKWRICNELSS FT LGYLSLYNLVYVIRNLPHKFLWVEEVDVNDCKDDVKTLLY" FT gene complement(1189..1632) FT /gene="AC2" FT CDS complement(1189..1632) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:K4N0I9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K4N0I9" FT /protein_id="AFV36770.1" FT /translation="MSEAHSGDKRKAPIQEPIHAAAKKKRRIPEQRTRIVWKQCGCSAF FT ITPQCKYQNGFTHWGITKSCTDYESSRILRQSHVCGSDCSVLPQVFIRPPERSGENNPQ FT VPTASEPQGEEATGIPQDLSPIQDNYNPSDWCYSQLDWYFDTP" FT gene complement(1565..2635) FT /gene="AC1" FT CDS complement(1565..2635) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:K4NDT3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K4NDT3" FT /protein_id="AFV36771.1" FT /translation="MAAPKRFRVSSKNYFITYPRCSLSKEDALEQILKINTPTNKKYIH FT IARELHEDGEPHLHMLVQFEGKFVCTNSRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQIDGRSARGGQHTANDAAAEALNSGSKEAALQIIREKLPEKFIFQYH FT NLVGNLDRIFSPPPAVYSSPFSSSSFNNVPDIISNWAADNIMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPRVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGEGSSFKYWLDKPEQDALRQWACKNAIFCNVRSPF FT WRQEEGANSGTNSRSG" FT gene complement(2221..2478) FT /gene="AC4" FT CDS complement(2221..2478) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K4N2C6" FT /protein_id="AFV36772.1" FT /translation="MGNLISTCWCSSKANSSAQIADSSTWYPHPGQLIFTPTSRELNPA FT PMSSPTSTRTGILSHGVNSRSTADLLEEVSILLMTRQQRP" XX SQ Sequence 2787 BP; 738 A; 590 C; 631 G; 828 T; 0 other; accggtgccc gcgccaccct tttaatgtgg accccacacg ctttacttta attattaaag 60 acgtgcctgt tgcagacttg gtcgccaaga atggatttgt gggacccgct tcagaaccct 120 ctcccagata ctttatacgg tttccggtgt atgctttctg taaaatacct gcaaagtatt 180 ttgaagaaat acgagccagg aaccctaggg ttcgagctct gctctgatct catccgcata 240 ctgcgtgtca agcagtatgg tagggcgaat tcccgtttct cggagatttc atccctatgg 300 ggggagaccg gtaagacgga gactgaactt cgagacagct atcgtgccct acactgggaa 360 tgctgtccca attgctgccc gaagctatgt cccggtttct cgaagcgtcc agatgaagag 420 aaggaagggt gatcgcatcc caaagggatg tgtgggtccc tgtaaggtac aggactatga 480 gttcaagatg gatgtcccgc acagtggtac cttcgtctgt gtgtctgatt tcactagggg 540 aactgggctt acccatcgat tgggtaagag ggtgtgtgtt aagtccatgg gcattgatgg 600 taaggtctgg atggacgaca atgtcgccaa acgagaccac actaacatca tcacttactg 660 gttgatccgt gataggagac ccaataagga tccattaacg tttagtcagg cctttactat 720 gtatgataat gagcccacta cagctaagat ccgaatggat ctgagagata gaatgcaggt 780 attgaagaaa ttctctgtaa ctgtttctgg tgggccttat aaccacaagg aacaggcatt 840 agttaggaag ttttttaagg gtttgtataa ccatgttacg tacaaccata aggaggaagc 900 taagtatgaa aatcatttag agaatgcttt gatgttgtat tctgctagca gtcatgctag 960 caatcctgta tatcagactc tgcgttgtag ggcttatttt tatgattcac acaataatta 1020 ataaaattgt tctttcatta atatagtaat gtttttacat cgtctttaca atcgtttaca 1080 tctacttctt ctacccacaa gaacttgtgg ggtaaattcc taattacata aactaagtta 1140 tacaatgata aataacctaa actacttaat tcattacaaa ttcgccattt aaggcgtgtc 1200 aaaataccag tccaactgtg aataacacca gtcagacggg ttgtaattat cctgaattgg 1260 agaaagatct tgtggaatcc cagttgcttc ctctccctgt ggttcacttg cagttggaac 1320 ttgaggattg ttctccccgc tacgctctgg tgggcgtata aacacttgag gtaaaacgga 1380 gcagtccgac ccacagacat gggattgtcg aagaattcga ctgctctcat agtctgtgca 1440 tgacttagtg attccccagt gcgtgaatcc attctggtat ttgcactgag gagttatgaa 1500 agcggaacag ccgcactgct tccacactat ccttgtcctt tgctctggta tgcggcgttt 1560 ttttttagcc gctgcgtgaa ttggttcctg aattggcgcc ttcctcttgt ctccagaatg 1620 ggcttctgac attacagaat atggcgttct tgcaagccca ctgcctcagt gcgtcttgtt 1680 ctggcttatc tagccagtat ttaaatgagg atccttcgcc tggattgcag aggaagatag 1740 tgggtattcc acctttaatt tgaactggct tcccgtactt tgtgtttgat tgccagtcct 1800 tctgggcccc cataaattct ttaaagtgct ttaggtattg ggggttgacg tcatcaatga 1860 cgttatacca agcactatta ctgtacactc ttggactcag atccaagtgc ccacacaaat 1920 aattgtgtgg cccaagagac cgagcccaaa ctgttttacc tatcctactt gggccttcta 1980 taactatact aatgggccta tccggccgcg cagcggcatc catgatgtta tcagcagccc 2040 aattgctgat aatatcaggt acattattaa aagaagaaga agaaaaagga gaagaatata 2100 cagcaggagg aggagaaaaa atcctatcta aattaccaac taaattatga tattgaaaaa 2160 taaatttttc tgggagtttc tcccttatta tttgtaatgc agcctccttg ctgccggaat 2220 ttaaggcctc tgctgccgcg tcattagcag tatgctgacc tcctctagca gatctgccgt 2280 cgatctggaa ttcaccccat gtgagagtat ccccgtcctt gtcgacgtag gacttgacat 2340 cggagctgga tttagctccc tggatgttgg ggtgaaaatg agctgacctg gatggggata 2400 ccaggtcgaa gaatctgcta tttgtgcaga cgaatttgcc ttcgaactgc accagcatgt 2460 ggagatgagg ttccccatcc tcgtgaagtt ctctggctat gtggatatat tttttgtttg 2520 tgggtgtgtt tattttcagt atttgctcta aagcatcttc tttagagaga gaacatcgtg 2580 gataagtaat aaaataattt ttagaagata ctctaaaccg tttaggagct gccatctgta 2640 ttggtgacaa tccaaacttg ctgaatgaat tggtgactgg tgacaatata tactatgtca 2700 ccaaatggca ttatggtaat ttgaacaact ttaatttgaa ttcgaaatcc tattggtccg 2760 ccaaaaagcg ggcaccgtat taatatt 2787 //