ID   JX867551; SV 1; circular; genomic DNA; STD; VRL; 1102 BP.
XX
AC   JX867551;
XX
DT   10-MAR-2013 (Rel. 116, Created)
DT   10-MAR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Cardamom bushy dwarf virus clone Fr-A3 replication initiation protein (Rep)
DE   gene, complete cds.
XX
KW   .
XX
OS   Cardamom bushy dwarf virus
OC   Viruses; Nanoviridae; Babuvirus.
XX
RN   [1]
RP   1-1102
RA   Barman A.R., Mandal B.;
RT   "Molecular characterization of cardamom bushy dwarf virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1102
RA   Barman A.R., Mandal B.;
RT   ;
RL   Submitted (25-SEP-2012) to the INSDC.
RL   Plant Virology Unit, Division of Plant Pathology, Indian Agricultural
RL   Research Institute, Pusa Campus, New Delhi, Delhi 110012, India
XX
DR   MD5; 25766c2c9b54d2796ca8703c9d6afd4f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1102
FT                   /organism="Cardamom bushy dwarf virus"
FT                   /host="large cardamom"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Kalimpong"
FT                   /isolation_source="infected leaves"
FT                   /collected_by="Dr.Bikash Mandal"
FT                   /collection_date="2007"
FT                   /clone="Fr-A3"
FT                   /db_xref="taxon:262588"
FT   gene            93..953
FT                   /gene="Rep"
FT   CDS             93..953
FT                   /codon_start=1
FT                   /gene="Rep"
FT                   /product="replication initiation protein"
FT                   /db_xref="GOA:M1T7M1"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:M1T7M1"
FT                   /protein_id="AGG38935.1"
FT                   /translation="MARYVVCWMFTINNPSSLPVMRDEIKYMVYQVERGQEGTRHVQGY
FT                   VEMKRRSSLKQMRMFFPGAHLEKRKGTQEEARTYCMKEDTRIEGPFEFGVFKLACNDSL
FT                   YDVIQDMRLTNKRPLEYLYDCPNTFDRSKDTLYRVQAEMNKTKAMESWGNSYGSWTEQV
FT                   EELMAQPCHRRIIWVYGPNGGEGKTTYAKHLMKTRNAFYTPGGKALDICRLYNYEEIVI
FT                   FDIPRCKEEYINYGIIEEFKNGIVQSGKYEPVLKIVEYVEVIVMANFLPKEGIFSEDRI
FT                   KVVAC"
XX
SQ   Sequence 1102 BP; 348 A; 206 C; 295 G; 253 T; 0 other;
     agcgctgggg cttattatta cccccagcgc ttgggacgga acatttgcat ctataaatag        60
     acctcccctc tcaacgcttg gttgtaaacc ccatggcgcg atatgtggta tgttggatgt       120
     tcaccatcaa caatccctcg tcactaccag tgatgaggga tgaaatcaaa tacatggtat       180
     accaagtgga gagaggacag gagggaaccc ggcatgtgca gggatacgtg gagatgaaga       240
     ggcgaagctc tctgaaacag atgaggatgt tcttcccggg tgcccatctc gagaagcgaa       300
     agggcacaca ggaagaagca agaacatact gtatgaagga agacacaagg atcgaaggac       360
     ccttcgagtt tggggtcttc aaactggcat gtaatgacag tttgtatgat gtaatacagg       420
     atatgcgact cacgaacaaa aggcccttgg agtatttata cgattgtcca aatacattcg       480
     atagaagtaa ggatacatta tacagagtac aggctgagat gaataaaacg aaagctatgg       540
     agagttgggg aaattcctat ggatcatgga ctgaacaggt cgaagagtta atggcgcagc       600
     catgtcaccg acgaatcatt tgggtctacg gcccaaatgg aggcgaagga aagaccacgt       660
     atgcgaagca tctgatgaag accagaaacg cgttttacac accaggaggg aaggcgttag       720
     acatatgtag gctgtataat tatgaggaaa tagttatatt tgatattccc cgatgcaaag       780
     aggaatatat taattatggt attattgagg agtttaaaaa tggtattgtg caaagcggga       840
     aatatgaacc cgttttgaaa atagtggagt atgttgaagt aattgtaatg gctaacttcc       900
     tgccgaagga aggaatcttc tcggaagatc gaataaaggt ggtagcttgc tgaacacgct       960
     atgccgaaaa gccgcaacgc aattatgacc tgtcggtatc gcctttatta aagaatcaag      1020
     ggccgaaggc ccgtcaagat gaacggtcga taaaccacca cttgagtggt gggccagatg      1080
     tcccgagtta gtgcgccacg ta                                               1102
//