ID   JX867546; SV 1; circular; genomic DNA; STD; VRL; 1097 BP.
XX
AC   JX867546;
XX
DT   10-MAR-2013 (Rel. 116, Created)
DT   15-MAY-2014 (Rel. 120, Last updated, Version 3)
XX
DE   Cardamom bushy dwarf virus clone Fr-NSP-1 nuclear shuttle protein (NSP)
DE   gene, complete cds.
XX
KW   .
XX
OS   Cardamom bushy dwarf virus
OC   Viruses; Nanoviridae; Babuvirus.
XX
RN   [1]
RP   1-1097
RX   DOI; 10.1016/j.virusres.2013.09.027.
RX   PUBMED; 24091364.
RA   Mandal B., Shilpi S., Barman A.R., Mandal S., Varma A.;
RT   "Nine novel DNA components associated with the foorkey disease of large
RT   cardamom: Evidence of a distinct babuvirus species in Nanoviridae";
RL   Virus Res. 178(2):297-305(2013).
XX
RN   [2]
RP   1-1097
RA   Shilpi S., Mandal B.;
RT   "Molecular characterization of cardamom bushy dwarf virus";
RL   Unpublished.
XX
RN   [3]
RP   1-1097
RA   Shilpi S., Mandal B.;
RT   ;
RL   Submitted (25-SEP-2012) to the INSDC.
RL   Plant Virology Unit, Division of Plant Pathology, Indian Agricultural
RL   Research Institute, Pusa Campus, New Delhi, Delhi 110012, India
XX
DR   MD5; 8e920187cbbddb4d3c6e3346290646e8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1097
FT                   /organism="Cardamom bushy dwarf virus"
FT                   /host="large cardamom"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Kalimpong"
FT                   /isolation_source="infected leaves"
FT                   /collected_by="Bikash Mandal"
FT                   /collection_date="2010"
FT                   /clone="Fr-NSP-1"
FT                   /db_xref="taxon:262588"
FT   gene            226..693
FT                   /gene="NSP"
FT   CDS             226..693
FT                   /codon_start=1
FT                   /gene="NSP"
FT                   /product="nuclear shuttle protein"
FT                   /db_xref="InterPro:IPR008706"
FT                   /db_xref="UniProtKB/TrEMBL:M1T7L6"
FT                   /protein_id="AGG38930.1"
FT                   /translation="MDWVDSQYKTCTHRCRLEKRYPREARENLQEVICTDAGEGRKNPR
FT                   RVLLRSITVGFNGSFRGNNRNVRRFIYLSIRQDDGHMRPVLILPFGGYGYHNDFYYFEG
FT                   KGEVNCDIASDYIPAGVDWHRDMEVSISNSNNCDEYCDMKCYIVCSLRIKD"
XX
SQ   Sequence 1097 BP; 389 A; 180 C; 254 G; 274 T; 0 other;
     agcatggggg actattatta ccccccatgc ttgggacgga acatttgata acgggtcggg        60
     cgtaatgggt tttttaaacc aataagcccg gtaacccccg gtacgcccat tcaatgggcg       120
     ggaaataaga gcacccaaaa ttcaaagatt acttgccctg caagtaatcg aacactttat       180
     aaatatggga agtctctgaa gcaaaaatcc attgcacata ttggcatgga ttgggtggat       240
     tcacaataca agacgtgtac gcaccggtgc cgattggaaa aaagataccc gcgagaagct       300
     agggaaaacc tacaggaagt aatctgtaca gacgcaggcg aaggtaggaa gaacccacga       360
     agagttcttc tgagatccat cacggtaggg tttaacggga gtttcagagg aaataacagg       420
     aatgtccgtc gcttcatata tctgtcgatt cgacaagatg atggccatat gagacccgtc       480
     ctaattctcc ccttcggagg ttacggatat cataacgatt tctactattt tgaaggaaaa       540
     ggagaagtca attgtgatat tgcgtcggat tatatacctg caggagtgga ctggcacaga       600
     gacatggaag ttagcattag taacagcaac aactgcgatg agtactgtga tatgaaatgc       660
     tatattgtat gttcgttaag aataaaggat taaatgtata cgcagtattg attaatatta       720
     agtaaactcg gagttgaatg taactaggaa gaagaaagga tatataaaat aaagtaaagc       780
     attagccaat aaaacatata atgcgctatg ccgaacattg gaagacgaaa attaagacct       840
     gtcggcatcg tctttagaac ggaataaggg ccgaaggccc gtttaagaat gaaacaaata       900
     ataaatgatg ttaaataata caaataaacg gttaaaggat ttataaatat aataatacat       960
     aaatacaccg tatatagata ataaagaaag gttataaaat aaataataaa tgtttagtgg      1020
     tttatttgta aaggttgtcg gtagtgtaat acagctggac accagttaag tggtgggcca      1080
     gatgtcccgc tgacgta                                                     1097
//