ID JX857691; SV 1; circular; genomic DNA; STD; VRL; 2638 BP. XX AC JX857691; XX DT 16-DEC-2012 (Rel. 115, Created) DT 16-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Sida ciliaris golden mosaic virus strain Venezuela:Lara:M3:2009 segment DE DNA-A, complete sequence. XX KW . XX OS Sida ciliaris golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2638 RA Zambrano K.A., Marys E.E., Mendez N.; RT "Begomovirus infecting Sida sp. in Venezuela"; RL Unpublished. XX RN [2] RP 1-2638 RA Zambrano K.A., Marys E.E., Mendez N.; RT ; RL Submitted (22-SEP-2012) to the INSDC. RL CMBC, IVIC, C/Panamericana km 11, Caracas, Caracas 1020-A, Venezuela XX DR MD5; 3e384dbd309d2e72c8f5b33878b847a7. DR EuropePMC; PMC6344024; 30673741. XX FH Key Location/Qualifiers FH FT source 1..2638 FT /organism="Sida ciliaris golden mosaic virus" FT /segment="DNA-A" FT /host="Sida ciliaris" FT /strain="Venezuela:Lara:M3:2009" FT /mol_type="genomic DNA" FT /country="Venezuela:Lara" FT /collected_by="Zambrano, K" FT /collection_date="2009" FT /db_xref="taxon:1264880" FT gene 217..939 FT /gene="AV1" FT CDS 217..939 FT /codon_start=1 FT /gene="AV1" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:L0ARN9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:L0ARN9" FT /protein_id="AFZ77096.1" FT /translation="MPKREAPWRSMEGTSKVSRNXNDSPRAGIGGPKITRASEWVNRPR FT DRKPRIFRTLRTSDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKR FT FCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTAT FT VKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNYVVYNHQEAAKYENHTENA FT LLLYMACTHASKPCVCNA" FT gene complement(914..1372) FT /gene="AC3" FT CDS complement(914..1372) FT /codon_start=1 FT /gene="AC3" FT /product="Ren" FT /note="replication enhancement protein" FT /db_xref="GOA:L0APR6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L0APR6" FT /protein_id="AFZ77092.1" FT /translation="MDSRTGEIITARQAENGVYIWEIENPLYFKMYRVEDPLYTTSRVY FT SIQIRFNHNLRRALHLHKAFLNFQVWTRSLTASGSTYLARFRHLVNMYLDQLGVISINN FT VIRAVRFATAKPYVSHVLERSFNKIQILLIQNRIIEIDPNLKRCIHRV" FT gene complement(1119..1508) FT /gene="AC2" FT CDS complement(1119..1508) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transactivator protein" FT /db_xref="GOA:L0ARA2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L0ARA2" FT /protein_id="AFZ77093.1" FT /translation="MRSSSPSQPPSIKKAHRRAKRRAIRRRRIDLQCGCSIYFHIDCTG FT HGFTHRGNHHCTSGREWRVYLGDRKSPLFQDVQSRGSTIHHEQGVQHTNPVQPQPEESV FT ASPQSLPELPSLDEIPDSFWVDLFS" FT gene complement(1420..2502) FT /gene="AC1" FT CDS complement(1420..2502) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /note="replication associated protein" FT /db_xref="GOA:L0APG6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L0APG6" FT /protein_id="AFZ77094.1" FT /translation="MPSKRFQVNQKNYFLTYPKCSLSKEEALSQIKNLSTPVNKKFIKI FT CRELHENGEPHLHVLIQFEGKYRCTNSRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLE FT KDGDTVEWGEFQIDGRSARGGQQSANDSYAKALNADSVESAMRVLKEEQPKDFVLQNHN FT IRSNLERIFAKAPEPWVPPFQLSSFTNVPDEMQEWADDYFGSSPAARPVRPVSLIVEGD FT SRTGKTMWARALGPHNYLSGHLDFNARVFSNDVDYNVIDDVAPHYLKLKHWKELLGAQK FT DWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKDFLNKEENTSLRNWTLKNAVFITLTA FT PLYQESTQTSQEEGNQEKED" FT gene complement(2091..2354) FT /gene="AC4" FT CDS complement(2091..2354) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /note="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:L0AQM1" FT /protein_id="AFZ77095.1" FT /translation="MKMVSLISMYLSSSRANTGARIADSSIWSPQPGQHISIQTYRELN FT PAPTSSPISRRTETQLNGENSRSTADLLEEASSLLMIHMPRR" XX SQ Sequence 2638 BP; 646 A; 616 C; 639 G; 736 T; 1 other; accggatggc cgcgcgattt ttcccccccc tacgtggagc tctggtggcc gcgcgatccc 60 ctcgcgcttt tcctttaatt tgaattaaag cggacagctt tcgtcttgtc caatgatatt 120 gcgcctgtcg catctagata tctgcaacaa cttgggccct aagttgttgg ccggttataa 180 attaaaggtt tattgggcca cattctttaa gtcaaaatgc ctaagcggga agccccatgg 240 cgttctatgg agggaacctc aaaggttagc cgcaacgnta atgactctcc tcgtgcagga 300 attggtggcc caaagatcac acgggcctca gaatgggtca acaggcctag ggacaggaag 360 cccaggatct tccggacttt gaggacttca gatgtccctc gagggtgtga aggcccgtgt 420 aaggtacagt cattcgaaca gcgccacgac atctcacatg tcgggaaggt aatgtgcatc 480 tctgacgtta cacgtggtaa tggtattacc caccgtgtcg gcaagcgttt ttgtgtcaag 540 tctgtatata ttttagggaa gatatggatg gatgagaaca tcaagctcaa gaatcacaca 600 aacagtgtga tgttctggtt ggttagagac cgtagaccgt atggaacccc tatggatttc 660 gggcaggtgt tcaacatgtt cgacaacgag cccagcactg cgacggtgaa gaacgatctc 720 cgtgatcgtt tccaggtcat gcacaagttc tatggcaagg tcacaggtgg acagtacgcc 780 agcaatgaac aggctattgt taagaggttc tggaaagtca acaactacgt tgtctacaat 840 catcaagagg ctgcaaaata cgagaatcat acggagaacg cgttattatt gtacatggca 900 tgtacacatg cctctaaacc ctgtgtatgc aacgcttaag attcggatct atttctatga 960 ttcgattctg aattaataaa atttgaattt tattgaatga tctttccagt acatgactta 1020 catacggttt ggctgttgcg aaacgaacag ctctaattac attgttaatc gagatcacgc 1080 ctaactgatc aagatacata ttaactaagt gcctaaatct agctaaatag gtcgacccag 1140 aagctgtcag ggatctcgtc cagacttgga agttcaggaa ggctttgtgg agatgcaacg 1200 ctctcctcag gttgtggttg aaccggattt gtatgctgta caccctgctc gtggtgtata 1260 gtggatcctc tactctgtac atcttgaaat agaggggatt ttctatctcc cagatataca 1320 cgccattctc tgcctgacgt gcagtgatga tttcccctgt gcgtgaatcc atggcccgtg 1380 cagtctatgt ggaagtagat ggagcaaccg cactgaagat caatcctcct tctcctgatt 1440 gccctcctct tggctcgtct gtgtgctttc ttgatagagg ggggctgtga gggtgatgaa 1500 gaccgcattc tttagagtcc agttcctgag ggaggtgttt tcctccttgt tcaggaaatc 1560 tttatagctg gcaccctcac caggattgca gagcacgatt gctgggatcc cacctttaat 1620 ttgaactggc ttgccgtact tgcaatttga ctgccaatcc ttttgggccc cgagtagttc 1680 tttccagtgc tttagcttta ggtaatgcgg agcgacgtca tcaatgacgt tataatccac 1740 atcgttcgag aacactcggg cattgaagtc aaggtgaccg ctgagataat tatgtggacc 1800 caacgcacga gcccacatcg tcttccccgt cctcgagtca ccttcaacaa tcaaacttac 1860 tggtcttact ggccgcgcag cgggactgct cccaaaataa tcatccgccc actcttgcat 1920 ctcgtcgggc acgttagtga aagaggagag ttgaaacgga ggaacccatg gctccggagc 1980 ctttgcgaat atcctttcga ggttggagcg gatgttatga ttctgcagga caaagtcttt 2040 tggctgctcc tcctttaaca cccgcatggc agattcaaca gaatctgcat ttaacgcctt 2100 ggcatatgaa tcattagcag actgctggcc tcctctagca gatctgccgt cgatctggaa 2160 ttctccccat tcaactgtgt ctccgtcctt ctcgagatag gacttgacgt cggagctgga 2220 tttagctccc tgtatgtttg gatggaaatg tgctgaccgg gttggggaga ccagatcgaa 2280 gaatctgcta ttcgtgcacc tgtatttgcc ctcgaactgg ataagtacat ggagatgagg 2340 ctcaccattt tcatgcagtt ctcggcagat cttgatgaac ttcttgttca ccggagtgga 2400 taggttttta atttgggaaa gtgcttcttc tttgctaaga gagcactttg gatatgttag 2460 gaaatagttt ttctgattta cctggaaacg cttcgatggc atttttgtaa taagaggggt 2520 gtgtaccaat tgagctctct ctcaaaactc catatgaatt ggtacacagg tacacaatat 2580 atagtagaac cctcattcac cgatttgcac caccgtggcg gccatccgct ctaatatt 2638 //