ID JX847605; SV 1; linear; genomic RNA; STD; VRL; 8427 BP. XX AC JX847605; XX DT 04-DEC-2012 (Rel. 115, Created) DT 04-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Mink calicivirus strain MCV-DL/2007/CN, complete genome. XX KW . XX OS Mink calicivirus OC Viruses; Riboviria; Caliciviridae; Vesivirus; unclassified Vesivirus. XX RN [1] RP 1-8427 RX DOI; 10.1128/JVI.02582-12. RX PUBMED; 23166245. RA Yang B., Wang F., Zhang S., Xu G., Wen Y., Li J., Yang Z., Wu H.; RT "Complete genome sequence of a mink calicivirus in china"; RL J. Virol. 86(24):13835-13835(2012). XX RN [2] RP 1-8427 RA Yang B., Wu H.; RT ; RL Submitted (18-SEP-2012) to the INSDC. RL Institute of Special Economic Animal and Plant Sciences, Juye Street, RL Changchun, Jilin 130112, China XX DR MD5; ee6b952b737fddb458ca32dc9a4f7a43. DR EuropePMC; PMC3503044; 23166245. DR EuropePMC; PMC4263838; 25502676. DR EuropePMC; PMC5312078; 28196955. XX FH Key Location/Qualifiers FH FT source 1..8427 FT /organism="Mink calicivirus" FT /host="mink" FT /strain="MCV-DL/2007/CN" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Jun-2007" FT /db_xref="taxon:154122" FT CDS 14..5851 FT /codon_start=1 FT /product="ORF1 protein" FT /db_xref="GOA:K9MX36" FT /db_xref="InterPro:IPR000317" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001665" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR016024" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:K9MX36" FT /protein_id="AFY07854.1" FT /translation="MAPKATSSTLTKYFSVVDVHKRALRTSTPEITQWVDSKGFHVDFK FT SWRGVQIFTKLASASLGVKVTGTSARGYIQDVQNIALSLSGVTGNADSTPECQNITSSV FT CAVTGNADCCSQISLALGVTGNADSRLCTLEHYHKVTGNADFGIVNDWAVQGNDITPEN FT FGTVLRMLINGFTFSVRDALLTNYQQELRAEACPSCDLYDKCPVCNSKEINDDGTSSSP FT ETIPDWTHHTIESGITNLLSDGLDSMKESDLSNIAAHLRKAFETSSHPANQDMSKDQLH FT WLINMAEAGMKRKVDLGNVPMYNSRIQARRDWRNKLFNEPIDKLVQMATTTKDTIMKSA FT IWTILIEKASNAKHYSQDIFDKVKNTIGNFTTDTTNEFFKVIVSSMISHMRYFLIDSPD FT PITNLPGLILRLKPLNLQMIIENHVSTLEGWIITLTALAELYGFLDFAINLIPQIVQTF FT FDLLSTCTQKCYSMIRDLLTSTFKAESLDLKNPFWYAISAFVVYFVTGFLPNNAKMTAI FT KQVLGGANTLIAGILAIQKLSAMFASWSNEFVVKDISVRVIGLTESNNPTVTQDMDAVC FT NLQSLAEKLREEIKLKTLDPTFQPYLPILRNLLSTVDGVVSSCAKRKAIATQRVAPVAI FT ILTGPPGCGKTTLAYELAKRLSNQKPSILNLSIDHHDAYTGNEVCIIDEFDSNSKVDYV FT NFVIDMVNTNPMLLNCDMIENKGKVFSSKYVIMTSNNETPVTSTSTRAPAFYRRVRIID FT VTNPQVMQFKYQNPGQPVPSYLYNANFSHLEMSMRGLGAYSKENVIDPIGRDAKGLPAP FT QPDRVNVETLVRHMKMNYQQNALTFRTESRPKAKVPTFAFICNQESIQTVKKLLQSAQI FT TYNGNFTIAEGPCNTTPVNAGSGSRVFVVTPEEADQIQGCKKFHVNTAKILRYPELALI FT EGDNFRTALGVCMSDQDVTDMFYYIHGKSVNDRVSLDKLPANQNVVTVHNVYDIVWALS FT KHLSITGKFQAIKALYELLMTPDTLPVALRNWMDSTSFSQDHVVTQFIVPGGTVILESC FT HGARMWATKGRVIRAGGVSATGGPEGGLRFLGTGIRNLPWSEIFREFLNLLSLLWSKIK FT GATLVLGVLAMYFRRNRPTAESKGKNKHGRGAVRGAGKGITLSDDEYDEWREYNFDKRN FT NLTVEDYLQLRNRAAMGSDDAEAVKFRYWYTMRQMRDQPGYDVDYATIIGKSGARDELV FT RTQMMKAPRNKKRDNLDDNPFSYYAEAEGKVQHANAIIPVTLVDGSRVGHAVHLGHGVC FT ISLKHVLATGDYVLGQKARDVVYDGELAHFRIDTYPKSAAPTGTGKPVKDPWGNVASTE FT WKHDVYSTSAGKMYGSIVFTNQKTAPGDCGLPYVDDRGCVVGLHAGSGGEQAPGKKIVI FT PYIKRKGYYKDSMKKFWREESPTISHKGLLCQETKDGRRVIGGTVLHVSPAHVDDYQNC FT SHQPANLGSSDPRNPISLHSIVVNNLQPYKERTPGPPTQILSRAKKMLIKTLEPFIPKT FT DEVLGMTEAFFKLNHDTSCGPYIGGRKKDHINSETKEISKQLLDHLSERWEVASKGLAI FT PHEYAVGLKDELRPVEKIAEAKRRLIWGCDVAVATVAAAAFKSVSDSIMAMHEIGFIQV FT GINMDGPAIETLFKRLYPSGHQRYCVDYSKWDSTQPPNVTSESLDILKHFSANHPIVDS FT AVATLSSPAIAVFDGVSFKTSGGLPSGMPLTSILNSLNHCLLVGCAIIQALEYRGIDVN FT WNIYDSIDMFTYGDDGVYIVPPLVDSVMPAVFDNLKTYGLKPTRTDKSNQPIEPVPQGV FT PVEFLKRSFVRNENGIRALLDRNSLLRQFYYIKGKNSMNWTEPPSEINVSSRSAQLWNV FT CLYASQHGPEFYSKVADLMNRAIDYEGLVIETPSYLEAVTRYNAYFNGVESNLVQMLSS FT DQPGLDKTVFEN" FT CDS 5857..7899 FT /codon_start=1 FT /product="ORF2 protein" FT /db_xref="InterPro:IPR004005" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="UniProtKB/TrEMBL:K9MYQ9" FT /protein_id="AFY07855.1" FT /translation="MPRPQRSYKSQRKAYSKALGRRFGWKSCPLGTLDFFYDEETACCD FT DPFHCCHEEVMDDICYELFYLDTDPDEACFLHSVSNFIPWESGWTFPAAPPFNLMGGFF FT LATKPGVVIQRCLEKVALPGVLHFSTRFTPFYTHEDVVFRAESAAAGNPEITTEEQGSV FT VATGPQPSASGMTTLASAATGTQEAEWKLFFAYHTSMNWSTRDGSGKVLFSQALSPKLN FT PYLKFLSQIYSAWAGSIDVRFTVSGSGVFGGKLAAVVVPPGVDASGGTSLLQFPHVLFD FT ARQTEPVIFNIPDIRKILWHGMEDQDTSTLVIIVYNELINPYHSGADATDCTITVETRP FT GADFSFNLMKPPTRILKTGKEPSDLIPKSSLLWEGNRLAGTIVTFAINPTIGQANRHFD FT SNKSTYGWSSPKHGDIICQVTGQNNKRVFAVTTGDSAMLVPGVPDGWPDYTAQAEWSVP FT TTDLASYDNFAYGQVSACMQYTHQNQGSGRIADHSVIGVGTLDNERTRVTPSNKIWANT FT LVLVYPKGITQNTKFKLRPMMTIRADANGRPIGDSLNRVCYYDKLPTATTLNGNYPLYY FT VSYFMSNYGNNGIQVYNSQILTTSANFAQSNYNIGPDSFAVYRIKDSTGRWFDVGISAD FT GFSYVGSFVLNFSALSAPYTASYMGIQSNSNPLAHNVDAGQSRTI" FT CDS 8130..8306 FT /codon_start=1 FT /product="ORF3 protein" FT /db_xref="UniProtKB/TrEMBL:K9MWI7" FT /protein_id="AFY07856.1" FT /translation="MISKLNVQGPALQAQAMADHGFRNNLYSNGRQLTYAELNQAMSAA FT ATRFYKPTFHTDQ" XX SQ Sequence 8427 BP; 2427 A; 2066 C; 1765 G; 2169 T; 0 other; gtaaaatagg actatggccc caaaagccac ttcctcaact cttacaaaat acttcagtgt 60 tgtagacgtg cataagcgcg ctctacgcac ttcaacccct gagatcaccc aatgggtgga 120 ctcaaagggt ttccatgtcg acttcaaaag ttggcgtgga gttcaaatct tcaccaagct 180 cgcctcggcg agccttggtg tcaaggtcac aggcacaagt gcccgtggct acatccaaga 240 tgttcagaac atcgcactct cactgagtgg agtaactggt aatgcggact ctactcctga 300 gtgccagaac atcacctcat ctgtttgcgc agtaactggt aatgcggact gctgctcaca 360 gatctcactt gcccttggag taactggtaa tgcggactcc agactgtgca ccctcgaaca 420 ctaccacaaa gtaactggta atgcggactt tgggattgtg aacgattggg ctgtacaagg 480 caatgacatc acccctgaga acttcggaac tgtcttacgg atgctgatca acggattcac 540 cttttctgtt agagacgccc tgttaaccaa ctaccaacag gaactccgag cggaagcatg 600 cccatcatgc gacctctatg acaagtgccc tgtgtgtaac tccaaagaaa tcaacgatga 660 tggaacaagc tcctctccgg agaccatccc cgactggacc caccacacaa tcgaatcagg 720 aatcaccaat ctcctctctg acggacttga ctcaatgaaa gaatctgacc tctcaaacat 780 tgctgctcat ctcagaaagg cctttgaaac atcatctcac cctgccaatc aagacatgtc 840 gaaagatcag ttacactggt tgattaatat ggctgaagct ggcatgaaga gaaaggtcga 900 tcttggaaat gtacctatgt acaattccag gatacaagcc agacgagatt ggagaaacaa 960 actcttcaat gaaccaattg acaaattagt gcaaatggca acaacaacaa aagacacaat 1020 catgaaatct gcaatttgga ccatccttat cgaaaaagca tcgaacgcaa aacactactc 1080 ccaagacatc ttcgataagg tcaaaaacac aattggcaac ttcaccactg acacaacaaa 1140 tgaattcttc aaagtcatcg tctcttcgat gatttcacac atgagatact tcttgattga 1200 ttcccccgat ccaatcacga acctccctgg actcattctt cgtctgaaac cactcaatct 1260 ccaaatgatc attgaaaatc atgtatccac tttggagggg tggatcataa cactcactgc 1320 tctagctgaa ctatacggct ttcttgattt tgccatcaat ctcatccccc aaattgtaca 1380 aacattcttt gaccttctat ctacctgtac ccaaaagtgc tactctatga ttagggatct 1440 tctaacctct acattcaaag ctgaatctct agatcttaag aaccccttct ggtatgctat 1500 ctctgctttt gtagtttact ttgttacagg atttctcccc aacaatgcca aaatgactgc 1560 catcaagcaa gtgctcggtg gcgcgaatac actcattgct gggattctcg ctattcagaa 1620 gctttctgca atgtttgcat catggtctaa tgaatttgtt gtgaaagata tttctgtgcg 1680 tgtgattggt ctgactgagt ctaacaaccc cactgtaacc caagatatgg atgctgtgtg 1740 taatcttcag tcacttgctg aaaaacttcg tgaagaaatc aaactcaaaa cccttgaccc 1800 cactttccag ccttacctac caatcctcag aaatcttctt tccacggttg atggcgtggt 1860 atcctcttgt gcaaagagga aggctatcgc cactcaacgc gtggcccctg ttgccatcat 1920 ccttactgga cctccaggtt gtgggaaaac gacacttgct tatgaattgg ctaaaagact 1980 gtctaaccaa aaaccttcca tcctcaatct ctcaattgac caccacgatg cctacactgg 2040 taacgaggtt tgcatcatag atgagtttga ctcaaattcg aaagttgatt atgtcaattt 2100 cgtcatcgac atggtcaaca caaacccaat gctactaaat tgtgacatga ttgaaaacaa 2160 agggaaggtc ttctcaagca agtacgtgat catgacatca aacaatgaaa caccagtgac 2220 gtctacatca acccgtgctc ccgccttcta cagacgggtg cgcatcatcg acgttacaaa 2280 tcctcaagtc atgcaattca aataccaaaa ccctggtcaa ccagtaccca gctatctcta 2340 caatgctaac ttctctcacc tagagatgtc aatgagaggc ttgggcgcct acagcaagga 2400 aaacgtgatc gatcctatcg gtcgcgatgc taaaggcctc cctgcacctc agccagacag 2460 agtgaacgtt gaaacattgg tcagacacat gaaaatgaat taccaacaga atgcactgac 2520 tttccgcact gaatcaagac caaaagcgaa agtcccaacg tttgcattca tctgcaatca 2580 ggaatcaatt caaacggtga agaagctgct gcaatctgcg cagatcacct acaacggcaa 2640 cttcacgatc gctgaaggcc catgcaacac aactccagtt aacgctggta gtggatcaag 2700 ggttttcgtg gtcactcctg aagaagccga tcaaattcaa ggctgtaaga aattccatgt 2760 caacacagcc aaaatcctga gatacccaga attggcactc attgagggtg ataacttcag 2820 gaccgctctt ggcgtttgca tgagtgacca ggatgtaaca gacatgttct actacatcca 2880 tggcaaaagt gttaacgaca gagtgagctt ggacaagtta cccgcaaatc aaaatgtggt 2940 tactgttcac aacgtctatg acattgtctg ggcactttcc aaacatcttt ctatcactgg 3000 aaaatttcaa gctatcaaag ctctctatga acttctcatg acccctgaca ctctaccagt 3060 tgcactccgc aactggatgg actcaacatc tttctctcaa gaccatgtgg tcactcagtt 3120 tattgtgcct ggtggcacag tgatacttga gtcgtgccat ggtgctcgga tgtgggccac 3180 caaaggacga gttattcgtg ctggtggtgt gtctgcaacc ggaggacctg aaggaggctt 3240 acgcttcctc ggcactggaa tcagaaatct cccatggtct gaaatcttca gggaatttct 3300 caatcttcta tccctactct ggtccaagat taaaggtgca acccttgtct tgggtgttct 3360 agcaatgtac ttccgccgga acagaccaac agcagaaagt aagggtaaga acaaacatgg 3420 ccgaggcgct gtgcgaggcg ctggcaaagg aataaccctc tcagatgatg agtacgatga 3480 gtggcgtgaa tacaactttg acaagcgtaa caacctcaca gttgaagatt acctacagct 3540 gagaaatcgt gctgctatgg gatctgatga tgctgaagct gtcaaattcc gctactggta 3600 caccatgaga caaatgcgtg accaacctgg ttacgatgtg gattacgcca ccataattgg 3660 caaaagtggt gcgcgtgacg aactcgttcg tactcagatg atgaaagctc cacgcaacaa 3720 gaagagagac aaccttgatg ataacccatt ctcttactac gctgaagccg agggaaaggt 3780 tcagcatgcc aatgccataa tacctgtcac actagttgat ggctcgcgtg ttggacacgc 3840 tgtacacctt gggcacggtg tttgcatctc gctcaagcat gtgctagcca caggagacta 3900 tgtgttggga cagaaggcac gagacgtcgt ttacgacggt gagctcgcgc atttcagaat 3960 tgacacgtat ccaaaatctg ctgcaccaac tggcactggc aaacctgtga aggatccgtg 4020 gggcaacgtt gcatccacag aatggaagca cgatgtctac agtacttcag caggtaaaat 4080 gtatggatca attgtcttca ccaaccagaa aacagcaccc ggagactgcg gattaccgta 4140 cgttgatgac cgtggatgcg tcgttggcct gcatgcaggc tcaggtggag aacaagcccc 4200 tggcaagaaa atcgtgatcc catacatcaa gagaaagggg tattacaagg atagcatgaa 4260 gaaattctgg agggaagaga gtcccacaat cagccacaag ggacttctct gtcaagaaac 4320 aaaagatggc agacgtgtaa ttggcggcac tgttctgcat gtgtcacccg ctcacgtgga 4380 tgactaccaa aattgctctc accaacctgc taatcttgga tcatctgacc cccgcaatcc 4440 tatctctttg cattctattg ttgtaaataa tctccaacca tacaaagaaa ggactcctgg 4500 gccccctact caaattcttt cccgtgctaa gaaaatgtta attaagactc ttgaaccttt 4560 tattcccaaa actgatgaag tactcggaat gactgaagct ttcttcaaac tcaaccatga 4620 cacttcgtgt ggaccctaca ttggaggaag aaagaaggac cacatcaatt cggaaacaaa 4680 agaaatcagc aaacaactcc tggaccacct ctctgaaaga tgggaggtag cttcgaaagg 4740 cctagctatt cctcacgaat acgctgttgg tcttaaggac gagctcagac cagtcgagaa 4800 aattgctgaa gccaaaagaa ggctgatctg gggctgcgat gtcgccgtag cgaccgttgc 4860 agctgccgca ttcaagtcag tctcagattc gatcatggca atgcatgaaa ttggatttat 4920 ccaagtcggc atcaacatgg acggacctgc aattgaaact ctgttcaaaa gattgtatcc 4980 aagtggtcac caacgctatt gcgtagatta ctccaagtgg gattccactc agcctccaaa 5040 tgtaacttct gaatcattgg atatcttaaa gcacttctca gccaatcatc ctattgttga 5100 ttctgctgta gctacccttt cttccccagc tattgctgtc tttgatggtg ttagtttcaa 5160 gacttcggga ggactaccgt ctggcatgcc tctcacctct atcctgaatt ccctcaatca 5220 ctgcttactg gtagggtgtg caataattca agctttagaa tacagaggta ttgatgtgaa 5280 ctggaacatc tacgactcca tcgacatgtt cacatatggc gatgatggag tgtacatcgt 5340 accacccctt gtagatagtg ttatgcctgc agtatttgat aaccttaaaa cctatggcct 5400 taaacccacc cgtactgaca aatccaatca accaattgaa cctgtccctc aaggtgtccc 5460 tgtcgaattt ctcaaaagat ctttcgttag gaatgaaaat ggtattaggg ctctattaga 5520 taggaactct ctacttaggc aattttatta cattaaaggt aagaattcta tgaactggac 5580 tgaaccccct tcggaaatca atgtcagctc acgatctgca cagctttgga atgtctgtct 5640 ctatgcgtct caacatggac ctgaattcta ctctaaggta gcggacctga tgaatcgagc 5700 aatcgactat gaaggtctcg ttatcgaaac tccttcttac cttgaagctg tcactagata 5760 caatgcttac ttcaatgggg tcgaatccaa cctggttcag atgctaagca gtgaccaacc 5820 cggactcgac aagacagtgt ttgagaacta ggcatcatgc cacgtcctca gcgctcttac 5880 aaaagtcaaa ggaaagccta ttccaaggcg ctcggaagac gctttggttg gaaaagttgt 5940 cctctaggca ctctcgactt cttctacgat gaagagactg cctgttgtga tgaccccttc 6000 cattgctgtc atgaagaagt catggacgac atatgctacg aactgtttta tctggacaca 6060 gaccctgatg aagcctgctt ccttcattct gtttctaact ttatcccctg ggaatctggc 6120 tggaccttcc cggccgcacc gcccttcaac ctcatggggg gtttcttcct cgctacaaaa 6180 ccaggcgtcg taatccaacg atgtctggag aaagttgcac tgcctggtgt tcttcacttc 6240 agcacacggt tcactccgtt ctacacacat gaagatgttg tgtttcgtgc tgaatctgct 6300 gccgctggga atccagaaat tacaactgaa gagcaaggtt ctgtagttgc aaccgggcca 6360 caacccagtg cgtctggtat gactacacta gcctctgctg caactggaac tcaagaagcg 6420 gagtggaaac tcttctttgc ttaccacact tccatgaact ggtccacacg tgatggatca 6480 ggaaaggttc tcttctctca agctctatct cctaagctta acccttatct gaagttcctt 6540 tcacaaatct acagcgcatg ggctggttcc atcgatgtta gatttactgt ttctggtagt 6600 ggtgtgttcg gaggaaagct agctgctgtt gttgttccgc ctggtgtgga tgcttcaggc 6660 ggcactagcc tactccaatt ccctcatgtc ttgttcgatg caaggcaaac tgaacctgtc 6720 atattcaaca ttcctgacat caggaagatt ctctggcatg gcatggaaga tcaagacact 6780 tccactctgg tgatcattgt ttacaatgag ctcatcaacc cataccacag tggcgctgat 6840 gccaccgact gcactatcac agtcgagact cgtcctggtg ctgacttctc tttcaatctc 6900 atgaagcctc caacaagaat tctgaaaact ggcaaggagc cctctgacct catcccgaaa 6960 tcatcacttc tctgggaagg aaacaggtta gctgggacaa ttgtgacgtt tgcaatcaat 7020 ccaacaatcg ggcaagcaaa tagacacttt gactccaaca aatccaccta tggttggagc 7080 tcaccaaaac atggtgacat catttgtcaa gtaactggac aaaacaacaa aagggtattc 7140 gcagtcacaa ctggagacag cgcaatgctg gttccaggcg ttcctgatgg atggcctgac 7200 tacacagcac aagctgagtg gagcgttcct accactgacc tagcatcata cgataacttc 7260 gcttatggcc aagttagcgc atgtatgcag tacacacacc agaaccaagg tagtggaagg 7320 attgctgacc attcagttat tggtgttggt acacttgaca atgagagaac cagagtaaca 7380 ccaagcaata aaatttgggc taacacattg gtacttgtat acccaaaagg tatcactcaa 7440 aacaccaaat tcaaactcag accaatgatg acaatcagag ctgatgcaaa cggaagacca 7500 attggagact cactcaatcg tgtgtgctac tatgataaac tccccactgc aactactcta 7560 aatggcaatt accctcttta ttatgttagt tactttatgt ctaattatgg gaataatggt 7620 atccaagtct ataattcaca aatcctaact acttctgcaa attttgctca aagtaattat 7680 aatataggac ctgatagttt tgctgtttat agaattaagg attcaactgg cagatggttt 7740 gatgtcggca tttctgcgga cggattttca tatgtcggtt cttttgtact caacttctct 7800 gcactttctg caccttacac tgccagctac atgggaattc agagcaacag caatccactt 7860 gctcacaacg tggacgctgg tcagagcagg acaatatgag cgctattgct gcgatcggtg 7920 cggctgctgg agcagtcaat gctggatctg ggctaatagg ctctattgca aacgctgtga 7980 ttgctggaca gaaattagac atccaaaaag gtgctcttca agctcagata gatctgtaca 8040 ataaggagta tagttataat ttaggaaagt ttaattttga taaggaaata accaatcaat 8100 atttagattt aaataggaaa caattggaaa tgatatcaaa attgaatgtt cagggccccg 8160 ccttgcaagc gcaagccatg gcagatcatg ggtttcgtaa caacctgtat tccaacggca 8220 ggcagctaac atatgctgaa ctcaatcaag caatgtctgc tgcagccaca aggttttaca 8280 agcccacttt ccacacggac cagtgaacat tgtaggatag ttggttagca ctaattaatt 8340 caaatgtgtt gtgattattg atttcattag agtttgttaa ttagatactg atttggcagt 8400 tctcattgga aaaaaaaaaa aaaaaaa 8427 //