ID JX827487; SV 1; circular; genomic DNA; STD; VRL; 2645 BP. XX AC JX827487; XX DT 31-OCT-2012 (Rel. 114, Created) DT 31-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Blechum interveinal chlorosis virus segment A, complete sequence. XX KW . XX OS Blechum interveinal chlorosis virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2645 RA Mauricio-Castillo J.A., Banuelos-Hernandez B., Patino-Rodriguez O., RA Salazar-Gonzalez J., Ambriz-Granados S., Arguello-Astorga G.R.; RT "A new Geminivirus isolated from Blechum pyramidatum in Mexico"; RL Unpublished. XX RN [2] RP 1-2645 RA Mauricio-Castillo J.A., Banuelos-Hernandez B., Patino-Rodriguez O., RA Salazar-Gonzalez J., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (15-SEP-2012) to the INSDC. RL Unidad Academica de Agronomia, Universidad Autonoma de Zacatecas, Jardin RL Juarez 147, Zacatecas 98000, Mexico XX DR MD5; 95fcffbcc84b7a59822efb739d82b0f3. DR EuropePMC; PMC6344024; 30673741. XX CC GenBank Accession Numbers JX827487, JX827488 represent sequences CC from the 2 segments of Blechum interveinal chlorosis virus. CC ##Assembly-Data-START## CC Assembly Method :: DNAstar v. laser gene CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2645 FT /organism="Blechum interveinal chlorosis virus" FT /segment="A" FT /host="Blechum pyramidatum" FT /isolate="Campeche" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="25-Nov-2011" FT /db_xref="taxon:1246650" FT gene 227..982 FT /gene="CP" FT CDS 227..982 FT /codon_start=1 FT /gene="CP" FT /product="capsid protein" FT /note="encapsulates the viral genome" FT /db_xref="GOA:K4P890" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:K4P890" FT /protein_id="AFV48341.1" FT /translation="MLKRDAPWRSIAGASKVRRSLNFSPRGGMGPKSDKAYAWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYESRHDVSHVGKVICISDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDDTIKLRNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFSTKVTGGQYAANEQSLVKRFWKVNTHVVYNHQEAAKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(979..1377) FT /gene="AC3" FT CDS complement(979..1377) FT /codon_start=1 FT /gene="AC3" FT /product="rep-interacting protein" FT /note="REn; enhances function of Rep protein; AL3" FT /db_xref="GOA:K4NUZ1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K4NUZ1" FT /protein_id="AFV48345.1" FT /translation="MDSRTEESITARQAESSVFIWKVPNPLFFMIHKVEDPPYTTTRIY FT SIQIRFNHNLRKELNLHKAYFNFQIWTTSIRASGMDYLNRFKHLVMLYLNQLGVIGINN FT VIRAVRFATLKSYVNHVLENHEIQFKLY" FT gene complement(1124..1513) FT /gene="AC2" FT CDS complement(1124..1513) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator" FT /note="activation of late genes; silencing-suppressor; AL2; FT TrAP" FT /db_xref="GOA:K4NX76" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K4NX76" FT /protein_id="AFV48344.1" FT /translation="MQNSSSSTPPSIKPQHRIAKKRAIRRKRIDFNCGCSIYQHIDCIN FT YGFTHRGEHHCTSGREFRFYLEGSKSPIFHDTQSRRPTIHNNQNILHPNSVQPQPEEGT FT ESTQSLLQFPNLDDFDSSFWDGLFK" FT gene complement(1455..2510) FT /gene="Rep" FT CDS complement(1455..2510) FT /codon_start=1 FT /gene="Rep" FT /product="rolling-circle replication protein" FT /note="initiator of virus replication via a RC mechanism" FT /db_xref="GOA:K4NX28" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K4NX28" FT /protein_id="AFV48342.1" FT /translation="MPRKGSFSIKAKNYFITYPHCDLPKEAALEQLKNLHTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYNCTNHRQFDLVSPVRSAHFHPNIQGAKSSSDVKSYI FT SKDGDTIDWGEFQIDGRTARGGQHTANDAAAEALNASSKEDAMRIIKEKLPKEFLFQFH FT NLSSNLDKIFAKAPEPWVPPFQLSSFTHVPEDMQEWADDYFGRGSAARPERPISIIVEG FT DSRTGKTMWARSLGSHNYLSGHLDFNSRVYSNEVEYNVIDDVSPQYLKLKHWKELIGAQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKEENSALKAWTLHNAKFIFLN FT SPLYQTTTQDS" FT gene complement(2096..2359) FT /gene="AC4" FT CDS complement(2096..2359) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K4NUJ7" FT /protein_id="AFV48343.1" FT /translation="MKMGNHICTCLSSLRGNTTARITDSSTWYPQSGQHISIRTFRELN FT PAPTSSPTSARMEIQLTGENSRSTAELLEEVNIQLMMLQQRH" XX SQ Sequence 2645 BP; 706 A; 524 C; 562 G; 853 T; 0 other; accggatggc cgcccgtttt tatcacccgg tcccacctca tacccgcccc gctctcacac 60 atgcttttgg gaccactaat ttaatttatg ttggaccact taatttaaat ccagccaatc 120 agcgggccca tttaaagctt atttatcaac aacttggtgt ccaagtttta ccgttgttct 180 ataaagagta atgatttaaa acaatatcta ttgtctttaa ttcaaaatgc ttaagcggga 240 tgccccatgg cgctcaattg ctggggcctc taaggttaga cgctccctca atttttcgcc 300 tcgtggaggt atgggtccca aatctgataa ggcatatgca tgggtcaaca ggcccatgta 360 taggaagccc aggatttaca ggacgttgag aacccctgat gttcccagag gatgtgaagg 420 accttgtaag gttcaatcat atgaatctcg ccatgatgtg tctcatgttg ggaaggttat 480 ttgtatatct gacgtcacac gtggtaatgg tattactcat cgtgttggta aacgtttctg 540 tgtcaagtct gtgtatattt taggtaaggt ttggatggat gataccatca aactgaggaa 600 ccacacgaat agtgtgatgt tctggttagt tagggatagg agaccatatg gtacgcctat 660 ggattttggt caggtgttta atatgtttga caatgagcct agtactgcta ctgtgaagaa 720 cgatctacgt gatcgttttc aggtgatgca caagttttca accaaggtta caggaggaca 780 atatgctgcc aatgaacagt cacttgtgaa gcgtttctgg aaggtcaata ctcatgttgt 840 gtacaaccat caagaagctg ctaagtacga gaatcacaca gagaatgctc tgttattgta 900 tatggcatgt acacatgcct ctaatcctgt gtatgctaca ttgaaaattc ggatctattt 960 ttatgattcg attacgaatt aataaagttt gaattgtatt tcatgatttt caagtacatg 1020 gtttacatat gatttgagtg ttgcaaaacg aacagctctt attacattat taattccaat 1080 aacacctaat tgatttaaat acaacataac taaatgttta aatctattta aataatccat 1140 cccagaagct cgaatcgaag tcgtccagat ttggaaattg aagtaggctt tgtgtagatt 1200 cagttccttc ctcaggttgt ggttgaaccg aatttggatg gagtatattc tggttgttgt 1260 gtatggtggg tcttctactt tgtgtatcat gaaaaatagg ggatttggaa ccttccagat 1320 aaaaacggaa ctctctgcct gacgtgcagt gatgctctcc tctgtgcgtg aatccatagt 1380 tgatgcagtc gatgtgttgg tatatagaac agccacaatt gaaatcaatt cgttttcgac 1440 gaattgctct cttcttagct atcctgtgtt gtggtttgat agagggggga gttgaggaag 1500 atgaattttg cattatgaag tgtccacgct tttaaagctg aattttcctc tttgtctagg 1560 aaatctttat agctagaccc ctctcctgga ttgcaaagca cgattgatgg tataccacct 1620 ttaatttgaa ctggctttcc gtatttgcaa tttgattgcc agtctctttg ggccccaatc 1680 aattctttcc agtgctttaa ctttaaatat tgtggactga cgtcatcaat gacgttatat 1740 tccacttcgt ttgaataaac cctagaattg aaatccaggt gtccacttaa ataattatgt 1800 gagcccaaag aacgggccca cattgtcttg ccggttctag aatcaccttc aacgatgata 1860 ctaataggtc tttccggccg cgcagcggaa cccctcccaa aataatcatc agcccactct 1920 tgcatatctt ctggaacatg agtgaatgat gatagttgaa atggaggaac ccatggttcc 1980 ggagccttag caaatatttt atccagatta ctggacaaat tgtgaaattg aaaaagaaac 2040 tctttaggga gcttctcttt tataatcctc attgcatcct cttttgacga tgcattcaat 2100 gcctctgctg cagcatcatt agctgtatgt tgacctcctc tagcagttct gccgtcgatc 2160 tggaattctc cccagtcaat tgtatctcca tccttgctga tgtaggactt gacgtcggag 2220 ctggatttag ctccctgaat gttcggatgg aaatgtgctg acctgactgg ggataccaag 2280 tcgaactgtc tgtgattcgt gcagttgtat ttcccctcaa actggataag cacgtgcaga 2340 tgtggttccc cattttcatg gagttctcta cagatcttga tgtatttttt attcaccgga 2400 gtatgtagat tcttgagttg ttccaatgct gcttcttttg gtaaatcaca gtgaggatat 2460 gtgatgaaat aatttttggc ttttattgag aaagaaccct ttcgtggcat tttggtaaat 2520 atgagtgttc ccccaattca gagctctcat aaaactctag agaattgggg gaactggggg 2580 aaaatatata ctaaaacctc ctatccagga tcttgcaaca cgtgtcggcc atccgttata 2640 atatt 2645 //