ID JX678285; SV 1; linear; genomic DNA; STD; VRL; 2540 BP. XX AC JX678285; XX DT 18-NOV-2012 (Rel. 114, Created) DT 18-NOV-2012 (Rel. 114, Last updated, Version 1) XX DE UNVERIFIED: Spinach yellow vein virus isolate Sikar movement protein gene, DE partial cds; coat protein-like gene, complete sequence; replication DE enhancer protein and transcription activator protein genes, complete cds; DE replication initiation protein-like gene, complete sequence; and symptom DE determinant gene, complete cds. XX KW UNVERIFIED. XX OS Spinach yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2540 RA Marwal A., Sahu A.K., Gaur R.K.; RT "Yellow vein virus complete genome associated with Spinacia oleracea"; RL Unpublished. XX RN [2] RP 1-2540 RA Marwal A., Sahu A.K., Gaur R.K.; RT ; RL Submitted (11-SEP-2012) to the INSDC. RL Department of Science, Mody Institute of technology and Science, RL Lakshmangarh, Sikar, Rajasthan 332311, India XX DR MD5; c48853c34fc7c1da859099ac2a85b678. XX CC GenBank staff is unable to verify sequence and/or annotation CC provided by the submitter. CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2540 FT /organism="Spinach yellow vein virus" FT /host="Spinacia oleracea" FT /isolate="Sikar" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="25-Feb-2012" FT /db_xref="taxon:1256523" FT CDS <1..336 FT /codon_start=1 FT /product="movement protein" FT /note="AV2; pre-coat" FT /db_xref="GOA:K7VRI9" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:K7VRI9" FT /protein_id="AFW90048.1" FT /translation="VRKLCFPFTMWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDT FT LGYDLIRDLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPIREPCCCPHCPREILC FT EVCVCVG" FT misc_feature 188..958 FT /note="similar to coat protein; AV1; CP" FT CDS complement(955..1263) FT /codon_start=1 FT /product="replication enhancer protein" FT /note="AC3" FT /db_xref="GOA:K7VIQ6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7VIQ6" FT /protein_id="AFW90049.1" FT /translation="MHHNRPFLMNRDIITVQIQFNHSLRKALGIHKCFLAFRIWMTSQP FT PIGRFLRVFKTQVTNHWNVLEHVVYVDQSSSIKFNIWNVLEHVVYVDQSSSIKFNIY" FT CDS complement(1100..1504) FT /codon_start=1 FT /product="transcription activator protein" FT /note="AC2; TrAP" FT /db_xref="GOA:K7WIE2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7WIE2" FT /protein_id="AFW90050.1" FT /translation="MRSSSPSKAHSTHALIKVQHRLAKKGTRRRRVDLPCGCSYFRPII FT CHAPMLSHRGTHHCSSTQPEESVGDTQMFPSLPNLDAPQQAIPNEQRHHHRPDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGL" FT misc_feature complement(1608..2492) FT /note="similar to replication initiation protein; AC1; rep" FT CDS complement(2108..2335) FT /codon_start=1 FT /product="symptom determinant" FT /note="AC4" FT /db_xref="UniProtKB/TrEMBL:K7VMZ5" FT /protein_id="AFW90051.1" FT /translation="MGLCISMPSSSSKVNPSSETPDISMSLTLITPPNSTQTSRELSPA FT LMSSPTSRRTVITSVMRPGTTSLMTSIPTT" XX SQ Sequence 2540 BP; 700 A; 472 C; 608 G; 760 T; 0 other; gtgcgcaagt tgtgttttcc attcaccatg tgggatccgt tattgaacga gtttcccgaa 60 accgttcacg gttttaggtg tatgttagca gttaaatatc tgcagttagt agaaaatacg 120 tattccccag atactctggg atacgattta attagggatt tgatttcagt aataagggct 180 aggaattatg tcgaagcgac cagcagatat aatcatttcc acgcccgctt cgaaggtacg 240 ccgccgtctc aacttcgaca gcccatacgt gagccgtgtt gctgccccca ttgtccgcgt 300 gagattttgt gtgaagtctg tgtatgtgtt gggtaagatc tggatggatg agaacattaa 360 gtacagaagt ccagatgttc ctagaggatg tgaaggccca tgtaaggttc agtcctttga 420 gtccagacat gatattcagc atataggtaa agtcatgtgt gtcagtgatg ttactcgtgg 480 taaacctcaa gattttggag aggtgtttaa catgtttgat aatgagccca gtacggcgac 540 taagatctgg atggatgaga acattaagac caagaatcac acgaatagtg tgatgttttt 600 cggtggacaa tacgcttcaa aggaacaagc tcttgtgaag aagtttatta gggttaataa 660 ttatgttgtg tataaccagc aagaagctgg caagtatgaa catcgtgata ggtatcaagt 720 gctgcgcaaa tggtatgcaa ctgtcaccgg tggacaatac gcttcaaagg aacaagctct 780 tgtgaagaag tttattaggg ttaataatta tgttgtgtat aaccagcaag aagctggcaa 840 gtatgaaaat cattctgaga atgcgttaat gttgtatatg gcatgtactc atgcctctaa 900 cccagtgtat gctactttga agatacggat ctatttctat gattccgtga caaattaata 960 aatattgaat tttattgaag atgattggtc tacatataca acatgctcta atacattcca 1020 aatattgaat tttattgaag atgattggtc tacatataca acatgctcta atacattcca 1080 atgattggtc acttgggtct taaagaccct taagaaacga ccaatcggag gctgtgaggt 1140 catccagatt cggaaggcta ggaaacattt gtgtatcccc aacgctttcc tcaggctgtg 1200 attgaactgt atctggacgg tgatgatgtc tctgttcatt aggaatggcc tgttgtggtg 1260 catccagatt cggaaggcta ggaaacattt gtgtatcccc aacgctttcc tcaggctgtg 1320 ttgagctgca gtgatgagtt cccctgtgcg aaagcatggg ggcgtggcaa atgattggtc 1380 tgaagtatga acacccacaa gggagatcaa ctctccgacg tctggtcccc ttcttggcta 1440 gcctgtgctg cactttgatt aaagcatggg tagagtgggc cttcgagggt gacgaagatc 1500 gcattcttta aagcccaatt tttgagtgca gaattcttct cttcgtccaa aaactcctta 1560 aatattgaat tttattgaag atgattggtc tacatataca acatgctcta atacattcca 1620 actggctttc cgtactttgt atttgattgc cagtcccttt gggcccccat gaattcttta 1680 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc ctcattactg 1740 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc ctcattactg 1800 gcccacattg ttttgcccgt tctgctatca ccctctatga ctatacttat tggtctattg 1860 gcccgcgcag cgtcaccgac aacattctcg gcagcccact cttcaagttc ttctggaact 1920 tgatcaaaag aagaagaaga aaaaggagaa acataaacct ccatcggagg tgtataaatc 1980 ctttctaaat tacattttaa attatgatat tgaaaaataa aatctttagg gagtttttcc 2040 ctaattattg ctaaagcagc ttcagccgaa cctgcgttta gggcctctgc atgattggtc 2100 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc ctcattactg 2160 atgtaatcac tgtccttctc gatgtaggac ttgacatcag agctggactt agctccctgg 2220 aagtttgggt ggaattgggt ggagttatta gggtgagtga catcgaaatg tctggggttt 2280 cggaacttgg atttaccttt gaactggatg agggcatgga tatgcagaga cccatcttgg 2340 tgtttttctt gtgccactct aaagcatggg ttatcagatg ggcaatttat tgactgaaga 2400 atttcgagca gtatgaaaat gggtattggg gtatgaaaat aagtaaggaa gatatttttg 2460 gcattaacac aaaaagagtt aatacgaggc atattgaatt ggggacactc aaaactctga 2520 ggaatggggg actccgggga 2540 //