ID   JX658570; SV 1; linear; genomic RNA; STD; VRL; 1775 BP.
XX
AC   JX658570;
XX
DT   25-NOV-2012 (Rel. 114, Created)
DT   25-NOV-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Grapevine partitivirus isolate 3138-03-561 RNA dependent RNA polymerase
DE   (RdRp) gene, complete cds.
XX
KW   .
XX
OS   Grapevine partitivirus
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1775
RA   Rott M.E., Belton M.;
RT   "Detection of grapevine and tree fruit viruses by next generation
RT   sequencing";
RL   Unpublished.
XX
RN   [2]
RP   1-1775
RA   Rott M.E., Belton M.;
RT   ;
RL   Submitted (07-SEP-2012) to the INSDC.
RL   Canadian Food Inspection Agency, Centre for Plant Health, 8801 East Saanich
RL   Rd, North Saanich, British Columbia V8L 1H3, Canada
XX
DR   MD5; bb78582276cd53bfabc9c083d1949c68.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: CLCbio Genomics Workbench v. 4.7
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1775
FT                   /organism="Grapevine partitivirus"
FT                   /host="Vitis vinifera"
FT                   /isolate="3138-03-561"
FT                   /mol_type="genomic RNA"
FT                   /country="Canada"
FT                   /collection_date="Sep-2011"
FT                   /db_xref="taxon:1256786"
FT   gene            325..1698
FT                   /gene="RdRp"
FT   CDS             325..1698
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RNA dependent RNA polymerase"
FT                   /db_xref="GOA:K7X0V8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:K7X0V8"
FT                   /protein_id="AFX73023.1"
FT                   /translation="MYDNIYGFTRRPEGTLGMYKSLAKFSGDKNDFGSLNRVQRRAMQG
FT                   AILKARKAFKLPWKRQPLDWHSVGQYFRTDTAAGVTFMGSKKGEVMEEIYHEARWLGHR
FT                   MKQDGKRFNPTNVRFPPCLAGQRGGMSDASDPKTRLVWVYPAEMLVIEGQYAPEMYRAY
FT                   MRDPHCPMLNGKSSQRLYTEWCCGLREGETLYGLDFSSFDTKVPAWMIRVAFDILRQNI
FT                   DFEYWNGEKVSKRDAAKWRNVWDSMVWYFINTPILMPDGRMFRKYRGVPSGSWFTQMVD
FT                   SVVNYILVSYLTTCQDAEIRNLKVLGDDSAFRTGSEFDLARAQEDADVTGMVLKPEKCE
FT                   KTTDPVEFKLLGTTYRGGRPHRPTEEWFKLALYPEGGVSSLDVSLTRLVGLWIGGAMHD
FT                   LHFCAFMHYFQQSYPCPEEGWFSKDQRRWLEVVFSGKAPRGWSSKKSLFWRSIFYTYT"
XX
SQ   Sequence 1775 BP; 443 A; 379 C; 474 G; 479 T; 0 other;
     agcgatattt tggccgttca tcggattttg agttagctgt aaagcttcgc taacttgcct        60
     tctttactac gtgacctagt ctacacgctg gacagttacg ttcccccttc gcttgacgat       120
     gtcgtagatg agtccctttc aatagacgat tccactctcg ttccctctga caggacgaga       180
     ggagccagct acgacatttt gtcttcgaaa tttgcgtcag aaaatcttcg tgaggtagcc       240
     agatatggcg gttacggagt gtattcaggt cagtcgaata ctgatccttg ggttagaaag       300
     accctaaaac tattcgaccg tgagatgtac gacaacatct atggtttcac tcgtcgtccc       360
     gagggtaccc tcggcatgta taaatcccta gctaagttct cgggtgacaa gaatgatttc       420
     ggatctctga accgcgtgca acgacgtgca atgcaaggtg caatacttaa agctcgaaaa       480
     gctttcaagt tgccgtggaa acggcagcct ttagattggc attcagttgg tcagtatttt       540
     cgtactgata ccgcggcagg tgttaccttc atgggctcaa agaaaggaga ggtcatggaa       600
     gagatctatc atgaggcgag gtggcttggc caccgtatga aacaagatgg aaaacggttt       660
     aacccaacaa acgtgcggtt ccccccatgt ttggctggtc agagaggagg tatgtctgat       720
     gcttccgatc cgaagaccag attggtctgg gtgtaccctg cagagatgtt agtgatagag       780
     ggccagtacg ctcctgaaat gtatagagcg tacatgcgtg atcctcactg tccaatgttg       840
     aacgggaaga gttcacaacg tttgtacacc gaatggtgtt gtggactgag agagggagaa       900
     acactttatg gtctggactt ctcttctttt gacacgaaag tgccagcttg gatgatccgt       960
     gtggcgtttg atatactcag acagaacata gacttcgagt actggaatgg agagaaggtc      1020
     tcaaagcgtg acgctgccaa gtggcgcaac gtatgggact ccatggtgtg gtattttata      1080
     aacactccga tattaatgcc agatgggcgg atgttccgca aatatcgagg tgtgccatca      1140
     ggctcctggt ttacgcagat ggttgattcc gtcgtgaatt atatattagt gtcctaccta      1200
     accacgtgtc aggacgctga aatcaggaat ctcaaggtgt taggggatga cagtgctttc      1260
     cggaccggga gtgagtttga tctcgcccgt gcccaggaag acgccgacgt taccggaatg      1320
     gtgttaaagc ccgagaaatg tgaaaagacg acagacccag tcgaattcaa actgcttggg      1380
     acaacctacc gtggtggacg accacaccgt cccaccgaag agtggttcaa gttggcgctg      1440
     tatcccgaag gtggtgtatc tagtttggac gtttcgctta ctagattagt gggtctgtgg      1500
     attggtggcg cgatgcatga tctgcacttc tgtgcgttca tgcactactt tcaacaatct      1560
     tatccgtgtc ctgaagaagg ctggttctca aaggatcaac ggagatggtt ggaagtcgtg      1620
     ttttccggca aggctccaag aggttggtca agtaagaagt cattattttg gcgatcaatc      1680
     ttttatacat atacgtgata acgtgtattc ttacaactct acaattgtaa atcctgttca      1740
     tcaggtgggt gtggtaacgg tttcgtaccg tgaat                                 1775
//