ID JX658567; SV 1; linear; genomic RNA; STD; VRL; 2762 BP. XX AC JX658567; XX DT 25-NOV-2012 (Rel. 114, Created) DT 25-NOV-2012 (Rel. 114, Last updated, Version 1) XX DE Grapevine chrysovirus isolate 3138-03-3959 putative protease gene, complete DE cds. XX KW . XX OS Grapevine chrysovirus OC Viruses; Riboviria; Chrysoviridae; Chrysovirus. XX RN [1] RP 1-2762 RA Rott M.E., Belton M.; RT "Detection of grapevine and tree fruit viruses by next generation RT sequencing"; RL Unpublished. XX RN [2] RP 1-2762 RA Rott M.E., Belton M.; RT ; RL Submitted (07-SEP-2012) to the INSDC. RL Canadian Food Inspection Agency, Centre for Plant Health, 8801 East Saanich RL Rd, North Saanich, British Columbia V8L 1H3, Canada XX DR MD5; 8e91f5890f975a2d5fc1eccdaa34b178. XX CC ##Assembly-Data-START## CC Assembly Method :: CLCbio Genomic Workbench v. 4.7 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Grapevine chrysovirus" FT /host="Vitis vinifera" FT /isolate="3138-03-3959" FT /mol_type="genomic RNA" FT /country="Canada" FT /collection_date="Sep-2011" FT /db_xref="taxon:1256787" FT CDS 125..2683 FT /codon_start=1 FT /product="putative protease" FT /db_xref="GOA:K7X6Z3" FT /db_xref="UniProtKB/TrEMBL:K7X6Z3" FT /protein_id="AFX73020.1" FT /translation="MSAVDRVVDYMSGLPQAAEHAKTYATEFAQRTMRSGVTVVDGVEE FT EKKIMSKGEREIIGRLNCPAKFTRHNFAIDVNLGVSVSADQKRYVRREKTASLDFLGSR FT DWFLEPAKSNAMYSSKESTVHLIDKVQKQRILAKCPNISGELASDIFITSVHERISVPS FT DMRHIMMKMYLILQDYNLGVTSKSEDVSHASDLTYNLTRNISPIDRMTAITNRRMVIDG FT DGFTSSELGLISLAAQQYPSTWYTFDNMYTRCNMEADDLAIVSDGDIDIDTSMLWGSPD FT RLYQMIWSIAAKLDCVPSLISAFENMRGKCKMMADIVKRVKPNRINSMVPLSYNMNTAF FT GSESSNTSVTRMPGYLSTSMSLVSDLLYGMTFEAAATCVGESLGAHGTLLSSKTPKTCS FT VINGIMRDYGLQHTSAEDNILLRNWDIMAGRPMTWDFGPILKDYVLSLAEMIINGADII FT LPQILHAIPSLTAVNTAYGLSRGWKGPKHMLESTKTERRDNSDGLAAFAWMMGERNVRP FT PVFYNRVGKKPIQLGPREFQLQSEAEGSYGLGDVSFWLHDTLGGRVDENEETSTNLYRT FT EYAGTMCSVVFHSSEERWVLTSRREPPGRQTMKGEKPPPEQDEQLVEEIPGSQPSGVPW FT MGAKPKKPDDIFKNLNALSRQNKIVPSHKPRHTRITSEGRAATQPYTLNGNEESDVLSS FT KRAEIREKEELSMNIISVPGDGTCGVHAMVEDLKAHGMLAPGDVARAHTYFSGEMRSKT FT FHDAQEMAALSQQLGMNMDLIDRDNSRVTRYGKFGDDAHTITIVKKGPHFDAGVILSGD FT ESKNASVQMLVGNLDEQQIPSSEFIESIKEAGSLFDTATD" XX SQ Sequence 2762 BP; 859 A; 570 C; 718 G; 615 T; 0 other; ataatccctt gcgccctgag gagaatcgaa acccctggtg ggtaggcgcg ttggattata 60 tatatattta aatagcttag gcaaacttac aaataacagt aaacatcaca cagtacaagc 120 aaacatgtct gccgtcgata gagtagtgga ctacatgtcc ggccttccac aggcagcaga 180 gcatgcaaag acatatgcaa cggagtttgc gcaaagaaca atgcgcagcg gggtgacagt 240 ggttgatggt gttgaggaag agaagaaaat tatgtcaaag ggtgagcgcg aaatcatagg 300 aaggttaaat tgtccagcca aattcacgag acacaacttt gcaattgatg taaatcttgg 360 ggtatcggtg tctgcagacc aaaagaggta tgtaaggcgt gagaagacag caagcctgga 420 tttcttgggt tcaagagatt ggtttctaga gccggccaag tcgaatgcta tgtactcatc 480 taaggaatca accgttcacc tgatcgacaa agtccaaaaa caacgaatcc tagccaaatg 540 cccaaacatt tcaggcgaac ttgcgagtga tatttttatc acaagcgtcc atgagagaat 600 atcagttccg tcggatatgc gccacataat gatgaagatg tatctgatcc ttcaggacta 660 taacctaggg gtgacgtcta agtctgagga tgtgagccac gcaagtgatc taacctacaa 720 tttaacgagg aacataagcc caatcgaccg tatgactgca ataactaaca ggcgaatggt 780 cattgacggc gacggcttca catcatctga gttagggttg atctctctcg ccgcacaaca 840 atacccaagc acctggtaca catttgacaa tatgtacacc agatgtaaca tggaggccga 900 tgatttggct attgtgagtg atggtgacat tgatattgac accagtatgt tgtggggatc 960 tcctgatagg ttgtaccaga tgatatggag catagcggct aaattggatt gtgttccatc 1020 gctgatttca gctttcgaaa atatgagagg caaatgtaag atgatggctg acattgttaa 1080 acgggtgaag ccaaacagaa tcaactctat ggtaccctta agttacaaca tgaacacagc 1140 ttttggcagt gaatcgagta acacaagtgt aacaagaatg cccggttatc tctctacaag 1200 catgtcacta gttagtgatc tgctatacgg gatgacattc gaggcagcag ctacgtgcgt 1260 aggcgagtca ttaggggccc atggcacact actatcatcc aaaactccaa agacctgtag 1320 tgtgataaat ggcatcatgc gggattacgg gcttcagcat acgtcagcag aagacaacat 1380 actgctgcgg aactgggaca taatggccgg ccggccaatg acatgggact ttgggcctat 1440 actcaaagac tatgttctgt cattggcaga aatgataata aacggagctg atataatact 1500 accacaaatt ctgcatgcga taccatcttt aacggctgta aatacagctt acgggctatc 1560 cagaggatgg aagggaccta agcatatgct agagtcgacg aaaacagagc gccgagacaa 1620 ctcagatggg cttgcagcat ttgcatggat gatgggggaa agaaatgtcc gaccacccgt 1680 cttttacaac cgtgtgggga agaaaccgat acagctaggt cctcgtgagt tccagttgca 1740 aagtgaggct gaaggaagct acggcctggg cgatgtgtcg ttctggctac atgatacgtt 1800 gggtggcagg gtagatgaaa atgaagaaac cagtacgaat ctatatcgca cagaatacgc 1860 tggtactatg tgctcagttg tgttccattc gtcggaagaa aggtgggtgc tcacttcaag 1920 gcgcgaacca cccggaaggc agactatgaa aggcgagaaa ccaccacctg aacaggatga 1980 gcagttagtc gaggaaattc cgggttcgca gccaagcggt gtaccttgga tgggggccaa 2040 gcctaagaaa cccgatgaca tattcaagaa tctgaatgca ttatcacgac aaaataaaat 2100 cgtgccgtcc cataagccaa ggcacacaag aataactagc gaagggcgag cggccacgca 2160 accatacacg ctaaatggga acgaagaatc ggacgtattg agcagtaaac gagctgagat 2220 cagggaaaaa gaagagctta gcatgaatat aatatctgtt ccgggtgacg gcacgtgtgg 2280 tgtccatgca atggtcgaag atttgaaagc ccacgggatg ttagcacctg gggacgttgc 2340 aagagcacat acgtacttct cgggcgagat gcggtctaag acattccatg acgctcagga 2400 aatggcggcc ttgtcacagc agctggggat gaacatggac ctaatagaca gggataacag 2460 cagagtaacg agatatggca agtttggtga tgacgcccat acaattacta tagttaaaaa 2520 agggccgcac ttcgatgccg gtgttattct gagcggtgat gaatcaaaga atgcaagtgt 2580 acagatgctg gtaggtaatc tagatgaaca acagatacca agctccgaat ttatagaatc 2640 aataaaggaa gccggcagcc tgtttgacac cgcaaccgat taagcgtcac gggcaggcag 2700 tgcaagaaaa tgagttattt tgaagaatgc tactctgaag gggtaagcag aaactaacgt 2760 ct 2762 //