ID JX625227; SV 1; linear; genomic RNA; STD; VRL; 2281 BP. XX AC JX625227; XX DT 14-NOV-2012 (Rel. 114, Created) DT 27-SEP-2014 (Rel. 122, Last updated, Version 3) XX DE Heterobasidion partitivirus 8 strain HetPV8-ir1 RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Heterobasidion partitivirus 8 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2281 RX DOI; 10.1007/s00705-013-1643-5. RX PUBMED; 23456423. RA Vainio E.J., Capretti P., Motta E., Hantula J.; RT "Molecular characterization of HetRV8-ir1, a partitivirus of the invasive RT conifer pathogenic fungus Heterobasidion irregulare"; RL Arch. Virol. 158(7):1613-1615(2013). XX RN [2] RP 1-2281 RA Vainio E.J.; RT ; RL Submitted (04-SEP-2012) to the INSDC. RL Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB RL 18, Vantaa 01301, Finland XX DR MD5; 00ed1668457f99a6f5f35805bed68107. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2281 FT /organism="Heterobasidion partitivirus 8" FT /host="Heterobasidion irregulare" FT /strain="HetPV8-ir1" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="2008" FT /db_xref="taxon:1249677" FT CDS 77..2191 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:K7T9Z2" FT /db_xref="UniProtKB/TrEMBL:K7T9Z2" FT /protein_id="AFW17810.1" FT /translation="MLSKVRDFFHEKLSRLLLQHSIFQSNDKDEEQTLLENQSSDVKRI FT YNSIHYSFQTDDTQAAYEDQYQHIKHVLEDKDRLSNFPAEFYLPYDTTTTPDNRVPPSG FT IDQLPYVYKRTNVVTATDEVPETGYPIQNRLLRLIRSRYPQYLPHVRTFTRPLGTTDAT FT VSDFFKPQHPSRLVDPSRISHVMKHVMNKMAITPYLPIHFVDTQYDKRPLSTGTGYYNR FT RSHEANIHALYSHPKEYENKRTSKGYYINAFLESARSLVHWIKSYGNPFRSKPADPRES FT LKKFFLQRPTMLFTRNHISKILGALKQRPVYAVDDLFLTLESMVTFPAHTIARKIECCI FT MYGYETIRGSNVQLDRLAQRYNSFFTIDWSGFDQRLPWVIVLLFFTEFLPRLLVINHGY FT APTYDFPSYPDLTTEMMYQRLSNILSFLATWYFNMVFITADGFAYVRRFAGVPSGLLNT FT QFLDSFGNLFLIIDALIEFGAQDEEIDSILLLIMGDDNSGFTIWSIARLEQFITFLESY FT ALTRYGMVMSKTKSLVTVLRHKIQTLSYTCNFGRPLRPIPELVAHLVFPEREFKPQFMS FT ARAVGMAWASCAQDKTFHDFCRDVFYEYLEESVPVDNTNIAWIQSHLPGYLRVDPEVTK FT MIDLNVFPSFLHVSQKLSRWQGPLSYQPKWDLAHFINQPDVIPDDSITMFEYMQEHSLS FT LDIQFDLFSA" XX SQ Sequence 2281 BP; 631 A; 724 C; 338 G; 588 T; 0 other; gaagttttgc atagcacgcc ttcacaagca ctcgcaaatt cacagcacct ttttaggtcc 60 tactcttctc tccaagatgt tatccaaagt acgcgacttc ttccacgaga aactatcccg 120 tctcctactc caacattcga ttttccaatc aaatgacaaa gacgaagaac agactctcct 180 cgaaaaccag tcctccgatg ttaaacgcat ctacaattcg atacactact ccttccaaac 240 cgatgacact caagctgcat acgaagacca atatcagcac atcaaacacg tcctcgagga 300 caaagatcgc ctgtccaatt tccccgcaga attctacctc ccgtatgata ctacgaccac 360 ccccgacaac cgcgtccctc cttccggcat tgatcagctc ccttacgtct acaaacgcac 420 aaacgtcgtt accgcaacag atgaagtacc cgaaactggc tatccaattc agaaccgcct 480 cctaagactc attcgctccc gctaccccca atatcttcca cacgttcgca cgttcacaag 540 acccctcggt acaactgacg caacagtctc agacttcttt aaacctcaac atccctcacg 600 actcgttgat ccctcccgca tttcacacgt tatgaaacac gtcatgaaca aaatggcaat 660 cactccttac ctcccaatcc actttgtcga cacacaatac gacaaacgtc ctctctcaac 720 tggtactggc tactacaacc gccgctctca tgaagctaac atacacgctc tctactcaca 780 ccccaaagaa tacgaaaaca aacgtacatc caaaggctac tacataaatg ctttccttga 840 atccgctcgc tcccttgttc actggatcaa atcctatggc aacccattcc gctctaaacc 900 agccgacccc cgcgaatcac tcaagaaatt cttccttcaa cgacccacaa tgttatttac 960 ccgaaaccac atttccaaaa tccttggtgc cctcaaacaa cgacccgtat acgcagttga 1020 tgacctcttc ctcactctcg aatcaatggt taccttcccc gctcacacaa tcgctcgtaa 1080 aattgaatgc tgcatcatgt atggctatga aacaatccgt ggctccaacg tccaactcga 1140 ccgcctcgct caacgctaca attccttctt cacaatagac tggtctggct ttgatcaaag 1200 actcccttgg gttatcgtcc ttctgttttt cacagaattc ctaccacgcc ttctcgtaat 1260 taatcatggt tatgccccca cgtacgactt cccgtcctac cccgacctca caaccgaaat 1320 gatgtaccaa cgcctctcga atatcctctc gttcctggca acatggtatt tcaacatggt 1380 tttcatcacc gcagatggat tcgcatacgt tcgccgcttc gctggtgtcc cctccggact 1440 actgaacacg caattcctcg attccttcgg caacctcttc ctcatcatcg atgctctcat 1500 cgaatttggt gcacaagacg aagaaattga ctccatcctc ctcctcatca tgggcgatga 1560 caactccggc ttcacaatat ggtcaatcgc aagactcgaa cagttcatca ctttccttga 1620 atcctacgcc ctcacccgct atggcatggt tatgtccaaa acgaaatcac tcgttactgt 1680 acttcgacac aagatacaaa ctctttctta cacttgcaac ttcggcagac cacttcgacc 1740 aatccctgag ctagtcgcac atctggtttt tccagaacgc gaatttaagc ctcaattcat 1800 gtcagcacgc gctgttggta tggcctgggc ctcctgtgct caagataaaa cctttcacga 1860 cttttgtcgc gatgtgtttt atgaatacct cgaagaatcc gttcccgtcg acaacacgaa 1920 tatcgcctgg atccagtcac atctacctgg atacctccgc gttgatcctg aagttacgaa 1980 gatgatagac ctcaacgtct ttccttcatt ccttcatgtg tctcagaaac tatcccgatg 2040 gcaaggacct ctctcctacc aaccaaaatg ggatttggca catttcatca accaaccaga 2100 cgtcattcct gacgactcga tcacaatgtt cgaatatatg caagaacact ccctctctct 2160 tgacattcaa ttcgatctct tttcagctta aagttttgct atgagaatag ttatctttgc 2220 ttctttttac tccacaaaat gaaaaaaaat caaaaaaata ataaaactca aaaaaaaatt 2280 c 2281 //