ID JX472403; SV 1; linear; genomic RNA; STD; VRL; 6376 BP. XX AC JX472403; XX DT 20-DEC-2012 (Rel. 115, Created) DT 26-MAR-2013 (Rel. 116, Last updated, Version 2) XX DE Salehabad virus strain I-81 polymerase gene, complete cds. XX KW . XX OS Salehabad virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus. XX RN [1] RP 1-6376 RX DOI; 10.1099/vir.0.048850-0. RX PUBMED; 23239568. RA Palacios G., Savji N., Travassos da Rosa A., Desai A., Sanchez-Seco M.P., RA Guzman H., Lipkin W.I., Tesh R.; RT "Characterization of the Salehabad virus species complex of the genus RT Phlebovirus (Bunyaviridae)"; RL J. Gen. Virol. 94(Pt 4):837-842(2013). XX RN [2] RP 1-6376 RA Palacios G., Savji N., Lipkin W.I.; RT ; RL Submitted (09-AUG-2012) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 W 168th Street, RL 17th Floor, New York, NY 10032, USA XX DR MD5; ded9d6d52210967c79eae911616caf75. DR EuropePMC; PMC3957954; 24390329. DR EuropePMC; PMC4269954; 25499083. DR EuropePMC; PMC4442372; 25653443. DR EuropePMC; PMC5802049; 29409533. XX CC ##Assembly-Data-START## CC Assembly Method :: Geneious v. 4.5 CC Sequencing Technology :: Sanger dideoxy sequencing; 454 CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6376 FT /organism="Salehabad virus" FT /segment="L" FT /host="Phlebotomus sp." FT /strain="I-81" FT /mol_type="genomic RNA" FT /country="Iran" FT /collection_date="1959" FT /db_xref="taxon:904699" FT CDS 20..6310 FT /codon_start=1 FT /product="polymerase" FT /db_xref="GOA:L0GCI2" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR022531" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:L0GCI2" FT /protein_id="AGA82741.1" FT /translation="MNELLAKQAHLRQGFSSGALMHYDDETLHLPIPDFFVRRSLEGIL FT IDLSLDQLDSSSTVGSSLMPNVDVKATSIPNFIHNFTFGHLSSSTDQPFSSKFPVINDG FT FDDLTPDVIIQSTAGSYHVVEFTTFRGREEGARGAASLKIAKYEQACRNRSVGRNVGLY FT AIAVHRGGVWTNMIMSKEDVDELCYRMRLAEAIEADIQVVCPEYRMADEEATKLEREMM FT GIVASIGMDWSKTERMFPNFKKAMFDKFRSNPPNQEYVKDILEKVIAKAQADLITSSFI FT GDGKPLAERLEMNGRECDYAIDALIIELRSRPNLRSTSDNKSTVQIPPWVFYEGPEGKS FT LMPLKELMPEGDHPMCSIWTKVCTSAIMEVIERMDDDPESELNFAMSGERTRDDERSRY FT HRVRVDLNQEEAEYAATLGVNGKKYRNLQAVVDSRTRSKLIFSPDHDTTDLEQFLLCQD FT YSDFEPLEEAYAPLLEDMDLRLDAQMIHQPTYTHYEGENEFLANHKKILQSPLGSWTQM FT VSLIGAELSASVKQHVKPNSFVVKRLLNSPLYMLIKPTSSKSHIFVSFALDKKYWIRDL FT NASTIFKHYIDAGSMFITDFVSYKLSKLTNLCKTNSLYEASLTFWMESFGFCSWESGNV FT SEKPQSPSLREALYMTKLSLLTLLEDKATTEELQTLLRYIVMEGFVSQPELPKPHKMIA FT KLPTKLRSELQVYLLHRSLLSMRRIARSPFRLMRFEGQINWSGLFNPLSGSEIREIHPL FT ISACYNGYFKNKEEETEPSALSAMYKKIIELEHLKPESDDFLGWGDPEEPAMHEFSRSY FT LKEAVEHAKQFLERIYGRNVMEQIEQDIIRELSSITLERLATLKATSNFNEDWYVYKDV FT KDKNYTRDKLIVKMSEFAAEGKSLAIEKFEACMSRIEERGAMHICLFKKQQHGGLREIY FT VMGAEERIVQSVVEAIARSIGRFFSSDTLCNPANKMKIPESHGLRARRHCKGPVWTTAT FT SDDARKWNQGHFVSKFALMLCEFTSPKWWPIIIRGCSMFTNKHMMMNLEFLRILDCHRE FT LNIEDDFVQTLFEAYHGNVDVPWISPGCTYLKTSTGMMQGILHYTSSLLHTIHQEFIRS FT LTFKIFNMKVNPDMSKQIVCDMMQGSDDSSMLISFPSGSDEILTKCKVTAAICFRVKKL FT LGVYLAIYPSEKSTACTDFVMEYNSEFFFHSQHVRPTIRWIAASCSLPEVETLVARQEE FT AANLMTSVSEGGGSFSLAACIQHSQCTLHYMLMGMGTSVLFAEYKKAIKKWKDPGLGFF FT LMDNPIAAGLAGFRYNLFKAITTTNLQKIYAFFMKKVKGTSAYHMQEGVIPETCSVSPG FT GALILSSSLKWGSRKKFQKLRSRLNIPDDWVEQINDMPQVLYRAPRTGLEITLRIAEKV FT HSPGVVSSLSTGNAVAKVMAAAVYFLSATIFEDSGRPEFNFLEDSKYSLLSKLAAYDGF FT NGVDDIEPEDVLFLFPNVEEFHQLDTLIYNKGALDVTHRSSAREATQTRVVVFDHLQTS FT RCSPEKLVSDKWFGTQKCKIGRTAMEQEWTKLKSTIRWLRDTPSETLDATPLHSHIQVR FT NFFARMEGKARTVRVTGAPVKKRSGVSKLAMVIRDNFCKTAILNGIEDEVGLTRSVSAE FT LSKHSLFSVLNGPYTEGAKISMVEKLLLALPEVGINPPDRRSRTNMIGVLQHYAREGEG FT TIKLLEEIGAGTIGAYVMPQKSMKKDGKVFYYGPGVWRGTMDGISVQIEVDGQPGLPPQ FT MTRILVSRTREPWILSHSIRAWADDMGVLNTKDMKETVRGDVRHWMYNFKLFGSGHAYG FT CPLIVVPDELIDFRNINDNDIFLKVRGSVINLFTRAKGIGRDLHIMSYSTSENDISSSS FT ILSLVNAQLDSCVSDFTVQPSSSWVKCEPLPLEMIRPVLEIAEGLRPIRRIDSDRLREI FT IRICTEAALRSKVGTIFTFVPISMEMAAPVDMSAMIDLMLEDDDFTSFQEVVEEVMEDM FT DIMNSYEVDDFSSVDVHLFGPAHFKEMSNLAAISHPLMDKLIDAAISQMSKTGVRRLVE FT TGKVGHKDLDISKLIFRALGRDPASIITDDFNLDLEYEVTDDMLG" XX SQ Sequence 6376 BP; 1880 A; 1278 C; 1589 G; 1629 T; 0 other; acacaaaggc gccaaaacga tgaatgaact actagcgaaa caagcccatc tacgtcaggg 60 tttttcaagc ggagctctaa tgcactacga tgatgagact ttacatcttc ctattcctga 120 tttcttcgtg cgcaggtctc ttgaggggat acttattgac ttgtctctgg atcagctgga 180 ttcaagctct acagtaggct catcactaat gcccaatgta gatgtgaaag caacttcaat 240 accaaacttc atccacaact tcaccttcgg tcatctatca tcatcaacag atcagccctt 300 ctcctcgaag ttcccggtca taaatgatgg ttttgacgac ctgacccctg atgtcataat 360 tcaatcaact gctggcagct accatgtagt tgagttcacc acttttagag ggagagagga 420 gggggcaaga ggagcagcat ctctaaagat tgcaaaatat gagcaggcat gtagaaaccg 480 cagcgtaggg aggaatgttg ggctgtatgc tattgcagta cacagaggtg gtgtgtggac 540 caacatgatc atgagtaaag aagatgttga tgagttatgt tacaggatga gactcgcaga 600 agccattgag gctgacatcc aggtggtgtg tcctgaatat agaatggcag acgaagaggc 660 aaccaagctt gagcgagaga tgatgggtat cgtggcatca attgggatgg attggtccaa 720 gactgaaaga atgtttccaa actttaagaa agccatgttt gacaagttca gatctaatcc 780 tccaaatcag gagtacgtaa aggacatctt ggagaaggtg attgcaaaag cccaggcgga 840 cttaatcact tcatccttca ttggagatgg aaagcctctt gcagagagac ttgagatgaa 900 cggcagagag tgtgactacg caattgatgc attgataata gaattgaggt cacgcccaaa 960 tcttcgcagc acatcagata ataagtccac agtccagatt ccaccctggg tcttctatga 1020 gggtccagag gggaagagtt tgatgcctct caaggagctg atgcctgagg gggatcatcc 1080 aatgtgctca atctggacca aagtgtgtac ttcagccatc atggaagtca ttgaaaggat 1140 ggatgatgat cctgagagtg agttgaactt cgctatgtct ggggaacgca ctcgggatga 1200 tgagaggagt aggtaccata gggtgcgcgt ggacttgaat caggaagaag ctgagtatgc 1260 cgccacccta ggggtcaatg gcaagaagta taggaacttg caagctgtcg tagattccag 1320 gacccgtagt aagttgatct tctctcctga ccacgacaca acagatttag agcaattttt 1380 gctctgccaa gactactcag attttgagcc tttagaggag gcttatgctc cattactaga 1440 ggacatggac ttgagattag atgctcagat gattcaccaa cctacataca cccactatga 1500 aggggagaat gaattcctgg caaatcataa gaagatactt caatcacctc ttgggtcatg 1560 gacacagatg gtgagcctta taggagctga gttgtcggca tcagtaaaac agcatgtgaa 1620 gccaaattct tttgtggtga agagactcct gaattctcct ctgtacatgc tgattaaacc 1680 cacttcttcc aaaagccaca tatttgtgtc ttttgctctg gacaagaagt attggattag 1740 ggacctgaat gcttctacaa tattcaagca ctatattgat gctgggtcta tgttcataac 1800 agactttgtg tcttacaaac tgagcaagct caccaacttg tgcaaaacaa actccctgta 1860 tgaagccagc ctcacttttt ggatggaaag tttcgggttc tgctcatggg agtcaggcaa 1920 tgtgagtgag aaacctcaga gcccctcact aagagaggct ctgtacatga caaagttgtc 1980 attgctcact ttactggaag ataaggcaac tacagaagag ttgcagactc tactgagata 2040 catcgtcatg gaaggattcg tctctcagcc agaactgcca aagcctcaca agatgattgc 2100 taagctaccc acaaagctaa ggtcggagct ccaggtgtac ttgttgcata ggagcttgct 2160 gagcatgaga agaatcgcca ggtctccttt cagactcatg agatttgaag gtcagattaa 2220 ttggtctggc ctcttcaacc ctctatcggg gtctgagatc agagagatcc accctttgat 2280 aagcgcatgc tacaatggct actttaagaa taaagaggaa gaaacagagc catcagccct 2340 atcggccatg tataagaaaa tcattgaact tgagcactta aagcctgaat ctgatgactt 2400 tctcgggtgg ggggatcctg aagagcctgc catgcatgaa tttagcagaa gctacctcaa 2460 ggaggctgtg gagcatgcaa agcaatttct agagagaata tatgggagga atgtgatgga 2520 gcagattgag caggacatca ttcgagagtt aagctctata accctcgaga ggcttgcaac 2580 acttaaggct accagtaact ttaatgaaga ctggtatgtt tacaaggatg ttaaggacaa 2640 aaactatact agggacaaat taatcgtgaa gatgtcagag tttgcagctg aaggaaagtc 2700 tcttgcaatt gaaaagtttg aggcctgtat gagcagaata gaggagagag gagcaatgca 2760 catctgcttg tttaagaaac aacagcatgg agggctcaga gagatttatg tgatgggcgc 2820 agaagagaga attgtccaaa gtgttgtgga agctattgcc agaagcattg ggaggttctt 2880 ttcatcagac acattatgca accctgccaa caaaatgaag atccctgaga gccatggact 2940 gagggccaga cgacattgta aaggcccagt gtggaccaca gcaacctcag atgatgcaag 3000 gaagtggaat caaggccact ttgtgtcaaa atttgcattg atgctatgtg agttcacaag 3060 tcctaagtgg tggccaatca taatcagagg ttgctccatg ttcaccaata aacacatgat 3120 gatgaatcta gagttcctta ggatcttaga ttgtcataga gagctgaata ttgaggatga 3180 ctttgttcaa acactatttg aagcttatca cggcaatgtt gatgttcctt ggattagtcc 3240 agggtgcacc tatctcaaga cttcaacagg aatgatgcag gggattctac actacacttc 3300 ctcactgcta cacacaattc accaggaatt catcagatca ctaaccttca agatattcaa 3360 tatgaaggta aaccctgaca tgagcaagca gattgtgtgt gatatgatgc agggttctga 3420 tgacagcagc atgctcatta gtttcccctc aggctccgat gaaatattga ccaagtgcaa 3480 ggtcactgca gcgatatgct ttagagtcaa gaagctactt ggggtgtatc tggccattta 3540 cccgtctgaa aagtcaactg catgcacaga ttttgtgatg gagtataatt cagaattctt 3600 cttccactca caacacgtga ggccaactat cagatggatc gcagcttcgt gtagtctccc 3660 tgaggtagaa acactagtcg caagacagga ggaggctgca aaccttatga catcagtgtc 3720 agagggtggt gggtcctttt ctctggcagc ctgcatacag catagtcagt gcactttgca 3780 ctatatgctc atgggcatgg gcacctctgt tctatttgca gagtacaaga aggcaataaa 3840 aaaatggaaa gacccagggt tagggttctt cctaatggac aacccgattg cagcaggctt 3900 ggccggattc agatacaatc tgttcaaggc aattacaact acgaatcttc agaagatcta 3960 tgcatttttt atgaagaagg ttaaggggac ttcagcttat cacatgcagg aaggagttat 4020 acctgagaca tgcagtgtca gtcccggagg tgccctcatt cttagctcgt cacttaagtg 4080 ggggtcaaga aagaagtttc agaagttgag gtctagatta aatataccag atgattgggt 4140 agagcagatc aatgacatgc ctcaagtctt gtacagggcc ccaagaacag gtctggagat 4200 aactcttaga attgcagaga aggttcacag tccaggagta gtgtcctcac tgagcacagg 4260 caatgcagtt gctaaagtca tggctgcagc tgtatatttc ctttctgcga ccatctttga 4320 agactctggc agacctgaat tcaactttct ggaggactca aaatacagct tgctatccaa 4380 gctagcagcg tatgatgggt tcaatggtgt tgatgacatt gagcctgagg atgtgctctt 4440 cctattccca aatgtggaag agttccatca gctggataca ctaatctaca ataaaggtgc 4500 cttagatgtc acacacagat ccagtgcgcg agaagccact cagactcgtg tggttgtttt 4560 tgaccactta cagacttcaa ggtgctcccc tgagaagctt gtgtctgata agtggtttgg 4620 aactcagaaa tgcaagattg gtagaactgc catggagcaa gaatggacaa agctaaagtc 4680 cactatcaga tggttgaggg acactccatc agaaactcta gatgcaaccc ccttacacag 4740 ccacatacaa gtccgaaact tcttcgctag aatggagggg aaggctagga ctgttagagt 4800 gactggggcc cctgttaaga agaggtctgg agtaagcaag ttggcaatgg tgatcagaga 4860 caatttctgc aagactgcca tcttaaacgg tattgaggat gaagttgggc tcactcgatc 4920 agtatcagca gagttgtcga agcactcctt gttctctgtc ttgaatggtc catatactga 4980 gggagcaaag atatctatgg ttgagaagtt actcctggct ctcccagaag ttggaattaa 5040 tccccctgat aggcgatcca ggacaaacat gattggagtg ctccagcact atgctcgtga 5100 gggggaagga accattaaac tgttagagga gattggggcg ggaacaattg gtgcatacgt 5160 gatgccacag aaatcaatga agaaggatgg taaagtgttc tattatgggc ctggggtgtg 5220 gagaggtaca atggatggca tctcagtgca aatagaggtt gatggacaac ctgggctacc 5280 acctcagatg accagaatcc ttgttagcag aacaagagag ccatggatcc ttagccatag 5340 cataagagcc tgggcagatg acatgggagt cttgaacaca aaagacatga aggagacagt 5400 tcgaggggat gtgaggcact ggatgtacaa tttcaagttg tttggctcag gccatgctta 5460 tggatgtcca ttgatagtgg tgccagatga gttgattgac tttagaaaca ttaatgacaa 5520 tgacattttt ctaaaagtta gggggtcagt aatcaatcta ttcactcggg caaaaggaat 5580 aggtagggat ctgcatatca tgtcatactc aacctcagag aatgacatta gctctagcag 5640 catactctca ttggtaaatg cccagctgga ctcttgtgtg agtgatttca ccgttcaacc 5700 aagtagttca tgggtgaaat gtgagccact gcctcttgag atgataagac cagtgctaga 5760 aatagcagag ggtctgagac ctattaggag gattgactca gatagattga gagagataat 5820 ccgaatctgc acggaagcag ctctaagatc aaaagtaggg actattttta cctttgtgcc 5880 aatttcgatg gaaatggctg cgcctgtaga catgagtgcc atgattgatc ttatgttaga 5940 agatgatgat ttcaccagtt tccaagaagt tgtagaagag gtgatggagg acatggatat 6000 catgaacagt tatgaagttg atgatttttc atctgtggac gtgcatctgt tcggacctgc 6060 tcacttcaag gagatgtcta atcttgcagc aatctcacat ccacttatgg ataagcttat 6120 tgatgctgct ataagccaga tgagcaagac tggagtaagg aggttggtag agacaggaaa 6180 agtgggccat aaggatctcg acatttcaaa acttatattt agagctctag gaagagaccc 6240 tgcatctatt attacggacg actttaacct ggatctggaa tatgaggtca ctgatgacat 6300 gcttgggtag aggctgactg aacaataatg cctactttct tcctacacaa tgactgtcca 6360 tttagtgaat cccatg 6376 //