ID   JX429895; SV 1; linear; genomic RNA; STD; VRL; 2290 BP.
XX
AC   JX429895;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Blackberry chlorotic ringspot virus isolate Oregon 2 movement protein and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Blackberry chlorotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2290
RX   DOI; 10.1007/s00705-012-1523-4.
RX   PUBMED; 23108578.
RA   Poudel B., Tzanetakis I.E.;
RT   "Population structure of blackberry chlorotic ringspot virus in the United
RT   States";
RL   Arch. Virol. 158(3):667-672(2013).
XX
RN   [2]
RP   1-2290
RA   Poudel B., Tzanetakis I.E.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville,
RL   AR 72701, USA
XX
DR   MD5; fc8ae42906eab7e61578132cb43aaa8b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2290
FT                   /organism="Blackberry chlorotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="black raspberry 'Munger'"
FT                   /isolate="Oregon 2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:OR"
FT                   /isolation_source="leaf"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:339420"
FT   CDS             217..1116
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0E3G5"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0E3G5"
FT                   /protein_id="AFT91227.1"
FT                   /translation="MALTPKMTALTFSADDEASLEKAVTEALAGSMELNMGIRRCAAFP
FT                   ATDTEAFLCELTTKETKTFIGKFTDKVRGRVFVDHAVIHLMYIPVILNTTDAIAELKIK
FT                   NLATGDELYGGTKVNLNEAFILTMTWPRSLFADEVNKHKGLYLGGVVSCAPHVPKSAKI
FT                   GRWYPMWTEKVSAKQLYQDTAKITNTRALETYTRTMISSDKEMRSLLRSRASIDIAAKS
FT                   KENPVLCSQYVNLLDQRVEGVDFTVKQIKPADVESLQLDEGPSSETVVLKPQLVSTDTT
FT                   TVDVDKPAIPASRNLLTA"
FT   CDS             1294..1989
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0E417"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:K0E417"
FT                   /protein_id="AFT91228.1"
FT                   /translation="MSVNRGRNGNSNGNRGCPNCFDGLDAAASNCTRCNSPVSNRQRRN
FT                   ARRAANFRNQRNVGATGALRAPIPLPVVPVPQALNQRNLRLPNGQVWVTRKPTDWAAKT
FT                   NDANDAMLLKTIFDGIPEIKPDTKVFRVLIGFVAESDGTFGIVDGVTGDTVPDLPIVGR
FT                   LGFQKNVYRSRDIVLEGKPADQLSEKAIVWCLNTSKRVEKRVRLADFWVAISRPKPLMP
FT                   PPDFLVEDN"
XX
SQ   Sequence 2290 BP; 614 A; 483 C; 551 G; 642 T; 0 other;
     gtattctctg agcataatac cacttattta aacaactccg aatcggacga tttccaactt        60
     tgaattccta caagttgagg tctttgggcc ggttgtttaa atttgtcaat cagataccac       120
     tatccgatcg aaggatctac cgatttaaac gttttcccaa acgtcggttg ctgttgggat       180
     cgattggtta ggaccgtcat ttcagaaaag gttgaaatgg ctttgacccc aaagatgact       240
     gcgcttacat tctcagctga tgatgaagca tcattagaga aggctgtcac tgaagctctc       300
     gctggttcga tggagctgaa tatgggtata aggcgatgtg ctgcttttcc tgccaccgac       360
     actgaagcgt ttctttgtga gttaactacc aaagaaacga aaacctttat cggtaaattt       420
     accgataagg tccgtggtcg agtttttgtc gaccacgctg ttatacattt gatgtatata       480
     ccagtgattt tgaataccac cgatgctatt gctgaattaa agattaagaa tttagctacc       540
     ggtgatgaat tgtatggtgg tacgaaggtc aatttaaacg aggcattcat tttaacaatg       600
     acatggcctc gatctttgtt cgctgatgag gttaataagc acaaagggct ctacctcggt       660
     ggagtggttt cctgtgctcc tcatgttcct aagtccgcaa aaattgggag gtggtacccc       720
     atgtggactg agaaggtctc tgccaaacag ctgtatcaag atactgctaa aatcacaaat       780
     acaagggcat tagagacgta tactcgaaca atgataagca gcgataaaga aatgcgtagc       840
     ctattgagaa gtcgtgcctc aatagatatt gccgccaagt caaaagagaa tcccgtactg       900
     tgctctcagt acgtaaattt gcttgatcaa agagttgaag gtgttgattt taccgtcaag       960
     caaattaaac cagcagatgt tgagtccctt cagcttgatg aaggacccag tagtgagacc      1020
     gttgttttga aacctcaatt ggtttccact gataccacta ctgtcgatgt tgataagcct      1080
     gctataccag caagtaggaa cttgctgact gcctgatcac cgttttgatg ttaccatttc      1140
     cagacgtggg gagttcttag aatagggggg agtacctcgg agtgactcga gtattaagtt      1200
     agtgaattct ttaatgaaag ataagctgct tcttgagctt acctgagatg tacaagtact      1260
     ttgactaaga atccagacca accatccaac gccatgtctg tcaacagggg aagaaatggt      1320
     aactccaacg gtaacagagg ttgcccaaac tgttttgacg gtttggatgc cgctgcttct      1380
     aactgcacgc gatgtaattc tccagtgtct aaccgccagc gtcgtaatgc gcggcgggct      1440
     gcgaatttcc gcaaccaacg taatgttggt gcgacgggag ctttaagggc tcctattcca      1500
     ttacctgtgg ttcctgtacc acaagccctc aatcagcgca acctgcgcct acctaatggt      1560
     caagtctggg taaccagaaa accaaccgat tgggcggcta agactaatga tgccaacgac      1620
     gcgatgttat tgaagaccat ttttgatggt atacccgaaa tcaaaccgga caccaaggtg      1680
     ttccgtgttt tgattggttt cgtcgccgag tctgatggga cttttgggat agtggatggt      1740
     gttaccggtg acactgtgcc cgatctaccc attgttggta gattgggttt tcagaaaaat      1800
     gtgtaccgaa gccgagacat tgttctcgag ggaaaacctg ctgatcagct ttcagagaaa      1860
     gctatagtat ggtgcctcaa cactagtaag cgtgttgaga agcgggtgag attggctgac      1920
     ttttgggtcg ccatttcgag accgaagccg ttgatgcctc ctccagattt tctggtcgag      1980
     gataattgac tggtgaatca cctcgaaggt aacttcgaga tgcctcacga cttaccagaa      2040
     gtagctggtt cgtgcgtgag atgcggattt cgcccacgga gagtgccaga tgcactctac      2100
     tggcggtgtg acatgtgcaa ttatttgcac tatgcatagt tacctcgcat ccgggtataa      2160
     atctatgaat ttcgctagaa cattccgaat cggacgattt ccacctgaaa aggtgagacc      2220
     tttgggtcga tgttctattg gttccgttaa taatattaat tattaacgat gcctccaatt      2280
     aaagagatgc                                                             2290
//