ID   JX429894; SV 1; linear; genomic RNA; STD; VRL; 2290 BP.
XX
AC   JX429894;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Blackberry chlorotic ringspot virus isolate Oregon 1 movement protein and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Blackberry chlorotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2290
RX   DOI; 10.1007/s00705-012-1523-4.
RX   PUBMED; 23108578.
RA   Poudel B., Tzanetakis I.E.;
RT   "Population structure of blackberry chlorotic ringspot virus in the United
RT   States";
RL   Arch. Virol. 158(3):667-672(2013).
XX
RN   [2]
RP   1-2290
RA   Poudel B., Tzanetakis I.E.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville,
RL   AR 72701, USA
XX
DR   MD5; 50804921afb58ba6f14e0e45745ab5ee.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2290
FT                   /organism="Blackberry chlorotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="black raspberry 'Munger'"
FT                   /isolate="Oregon 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:OR"
FT                   /isolation_source="leaf"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:339420"
FT   CDS             217..1116
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0E220"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0E220"
FT                   /protein_id="AFT91225.1"
FT                   /translation="MALTPKMTALTFSADDEASLEKAVTEALAGSMELNMGIRRCAAFP
FT                   ATNTEAFLCELTTKETKTFIGKFTDKVRGRVFVDHAVIHLMYIPVILNTTDAIAELKIK
FT                   NLATGDELYGGTKVNLNEAFILTMTWPRSLFADEVNKHKGLYLGGVVSCAPHVPKSAKI
FT                   GMWYPMWTEKVSAKQLYQDTAKITNTRALETYTRTMISSDKEMRSLLRSCASIDIAAKS
FT                   KENPVLCSQHVNLLDQRVEGVDFTVKQIKPADVESLQLDEGPSSETVVLRPQLVSTDTT
FT                   TVDVDKPAIPASRNLLIA"
FT   CDS             1294..1989
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0DYT7"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:K0DYT7"
FT                   /protein_id="AFT91226.1"
FT                   /translation="MSVNRGRNGNSNGNRGCPNCFDGLDAAASNCTRCNPPVSNRQRRN
FT                   ARRAANFRNQRNVGATGALRAPIPLPVVPVPQALNQRNLRLPNGQVWVTRKPTDWAAKT
FT                   NDANDAMLLKTIFDGIPEINSDTKVFRVLIGFVAESDGTFGIVDGVTGDAVPDLPIVGR
FT                   LGFQKNVYRSRDIVLEGKPADQLSEKAIVWCLNTSKRVEKRVRLADFWVAISKPKPLMP
FT                   PPDFLVEDN"
XX
SQ   Sequence 2290 BP; 613 A; 479 C; 553 G; 645 T; 0 other;
     gtattctctg agcataatac cacttattta aacaactccg aatcggacga tttccaactt        60
     tgaattccta caagttgagg tctttggacc ggttgtttaa atttgtcaat cagataccac       120
     tatccgatcg aaggatctac cgatacaaac gttctcccaa acgtcggttg ctgttgggat       180
     cgattggtta ggaccgtcat ttcagaaaag gttgaaatgg ctttgacccc aaagatgact       240
     gcgcttacat tctcagctga tgatgaagca tcattagaga aggctgtcac tgaagctctc       300
     gctggttcga tggagctgaa tatgggtata aggcgatgtg ctgcttttcc tgccaccaac       360
     actgaagcgt ttctttgtga gttgactacc aaagagacga aaacctttat cggtaaattt       420
     actgataagg ttcgtggtcg agtttttgtc gaccatgctg ttatacattt gatgtatata       480
     ccagtgattt tgaataccac cgatgctatt gctgaattga agatcaagaa tttagctacc       540
     ggtgatgaac tgtatggtgg tacgaaggtt aatttaaacg aggcattcat tttaacaatg       600
     acttggcctc gatcattgtt cgctgatgag gttaacaagc ataaagggct ctacctcggt       660
     ggagtggttt cctgtgctcc tcatgttcct aagtccgcaa aaattgggat gtggtacccc       720
     atgtggactg agaaggtctc tgccaaacag ctgtatcaag acacagcaaa aatcacaaat       780
     acaagggcat tggagacgta cactcgaaca atgataagca gcgataaaga aatgcgtagc       840
     ctattgagaa gttgtgcctc aatagatatt gccgccaagt caaaagagaa tcccgtactg       900
     tgttctcagc acgtaaattt gcttgatcaa agagttgaag gtgttgattt taccgtcaag       960
     caaattaaac cagcagatgt tgagtccctt caacttgatg aaggacccag tagtgagact      1020
     gttgttttga gacctcaatt ggtttccacc gataccacta ctgttgatgt tgataagcct      1080
     gctataccag caagtaggaa cttgctgatt gcctgattgc cgtttcgatg ttaccatttc      1140
     cagacgtggg gagttcttag aatagggggg agtacctcgg cgtgactcga gtattaagtt      1200
     agtgaattct ttaatgaaag ataagctgct tcttgagctt acctgagatg tacaagtact      1260
     ttgactaaga atccagacca accatccaac gccatgtctg tcaacagggg aagaaatggt      1320
     aactccaacg gtaacagagg ttgcccaaac tgttttgacg gtttggatgc cgctgcttct      1380
     aactgcacgc gatgtaaccc tccagtgtcc aaccgtcagc gtcgtaacgc gcggcgggct      1440
     gcgaatttcc gcaaccaacg taatgttggt gcgacgggag ctttaagggc tcctattcca      1500
     ttacccgtgg ttcctgtgcc acaagccctc aatcagcgca acttgcgctt gcctaatggt      1560
     caagtctggg taaccagaaa accaaccgat tgggcggcta agactaatga tgccaacgac      1620
     gcgatgttat tgaagaccat atttgatggt atacccgaaa tcaattcaga caccaaggtg      1680
     ttccgtgttt tgattggttt cgttgccgag tctgatggga cttttgggat agtggatggt      1740
     gttaccggtg acgctgttcc tgatctacct attgttggta ggttgggttt tcagaaaaat      1800
     gtgtaccgaa gccgagacat tgttctcgag ggaaaacctg ctgatcagct ttcagagaaa      1860
     gctatagtat ggtgcctcaa cactagtaag cgtgttgaga agcgggtgag attggctgac      1920
     ttttgggttg ccatatcgaa accgaagccg ttgatgcctc ctccagattt tctggtcgag      1980
     gataattgac tggtgaatta cctcgaaggt gacttcgaga tgcctcacga cttaccagaa      2040
     atagctggtt cgtgcgtgag atgcggattt cgcccacgga gagtaccaaa cgcactctac      2100
     tggtggtgtg acatgtgcaa ttatttgcac tatgcatagt tacctcgcat ccgggtataa      2160
     atctatgaat ttcgctagaa cattccgaat cggacgattt ccacctgaaa aggtgagacc      2220
     tttgggtcga tgttctaatg gttccgttaa taatgtttat tattaacgat gcctccaatt      2280
     aaagagatgc                                                             2290
//