ID   JX429893; SV 1; linear; genomic RNA; STD; VRL; 2290 BP.
XX
AC   JX429893;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Blackberry chlorotic ringspot virus isolate North Carolina 1 movement
DE   protein and coat protein genes, complete cds.
XX
KW   .
XX
OS   Blackberry chlorotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2290
RX   DOI; 10.1007/s00705-012-1523-4.
RX   PUBMED; 23108578.
RA   Poudel B., Tzanetakis I.E.;
RT   "Population structure of blackberry chlorotic ringspot virus in the United
RT   States";
RL   Arch. Virol. 158(3):667-672(2013).
XX
RN   [2]
RP   1-2290
RA   Poudel B., Tzanetakis I.E.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville,
RL   AR 72701, USA
XX
DR   MD5; e81bdcf1472e4f00099ad114088ea5c1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2290
FT                   /organism="Blackberry chlorotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="Rubus sp. (blackberry)"
FT                   /isolate="North Carolina 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:NC"
FT                   /isolation_source="leaf"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:339420"
FT   CDS             217..1116
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0E410"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0E410"
FT                   /protein_id="AFT91223.1"
FT                   /translation="MALTPKTTALTFSADDEASLEKAVTEALAGSMELNMSIRRCAAFP
FT                   ATNTEAFLCELTTKETKTFIGKFTDKVRGRVFVDHAVIHLMYIPVILNTTDAIAELKNK
FT                   NLATGDELYGGTKVNLNEAFILTMTWPRSLFADEVNKHKGLYLGGVVSCAPHVPKSAKI
FT                   GMWYPMWTEEVSAKQLYQDTAKITNTRALETYTRTMISSDKEMRSLLRSRASIDIAAKS
FT                   KEKPVLCFQYVNLLDQRVEGVDFTVKQIKPADVESLQLDEGPSSKAVVLKPQLVSTDTT
FT                   TVDVDKPAVPASRNLLIA"
FT   CDS             1294..1989
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0E1V4"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:K0E1V4"
FT                   /protein_id="AFT91224.1"
FT                   /translation="MSVNRGRNGNSNGNRGCPNCFDGLDAAASNCTRCNSPVSNRQRRN
FT                   ARRAANFRNQRNVGATGALRAPIPLPVVPVPQALNQRNLRLPNGQVWVTRKPTDWAAKT
FT                   NDANDAMLLKTIFDGIPEIKPDTKVFRVLIGFVAESDGTFGIVDGVTGDTVPDLPIVGR
FT                   LGFQKNVYRSRDIVLEGKPADQLSEKAIVWCLNTSKRVEKRVRLADFWVAISKPKPLMP
FT                   PPDFLVEDN"
XX
SQ   Sequence 2290 BP; 615 A; 484 C; 553 G; 638 T; 0 other;
     gtattctctg agcataatac cacttactct aaacaactcc gaatcggacg atttccaact        60
     ttgaattcct acaagttgag gtctttgggc cggttgttta aatttgtcaa tcagatacca       120
     ctatccgatc gaagggtctt ccgatcaaac gtgttcccaa acgtcggttg ctgttgggat       180
     cgattggtta ggaccgtcat ttcagaaaag gttgaaatgg ctttgacccc gaagacgact       240
     gcgcttacat tctcagctga tgatgaagca tcattagaga aggctgtcac tgaagctctc       300
     gctggttcga tggagctgaa tatgagtata aggcgatgtg ctgcttttcc tgccaccaac       360
     actgaagcgt ttctttgtga attgactacc aaggaaacga aaacctttat cggtaaattt       420
     accgataagg ttcgtggtcg agttttcgtc gatcacgctg ttatacattt gatgtatata       480
     ccagtgattt tgaataccac cgatgcaatt gctgaattaa agaataagaa tttagctacc       540
     ggtgatgaat tatatggtgg tacaaaggtt aatttaaacg aggcattcat tttaacaatg       600
     acttggcctc gatcgttgtt cgctgatgag gttaataagc acaaaggact ctaccttggt       660
     ggagtggttt cctgtgctcc tcatgttcct aagtccgcaa aaattgggat gtggtacccc       720
     atgtggactg aggaggtctc tgccaaacag ctgtaccaag atacagctaa gattacgaac       780
     acaagggcat tagagacgta cactcgaaca atgataagca gcgataaaga aatgcgtagc       840
     ctattgagaa gtcgtgcctc aatagatatt gccgccaagt caaaagagaa acccgtactg       900
     tgcttccagt acgtaaattt gcttgatcaa agagttgaag gtgttgattt taccgtcaag       960
     caaattaaac cagcagatgt tgaatccctt caacttgatg aaggtcccag tagtaaggcg      1020
     gtcgttttga aacctcaatt ggtttccact gataccacta ctgttgatgt tgataagcct      1080
     gctgtcccag caagtaggaa cttgctgatt gcctgaatac cgttctgatg ttgccatttc      1140
     cagacgtggg gagttcttag aaaagggggg agtaccacgg tgtgactcga gtattaagtt      1200
     agtgaattct ttaatgaaag ataagctgct tcttgagctt acctgagatg tacaagtact      1260
     ttgactaaga atccagacca accatccaac gccatgtctg tcaacagggg aagaaatggt      1320
     aactccaacg gtaacagagg ttgcccaaac tgttttgacg gtttggatgc cgctgcttct      1380
     aactgcacgc gatgtaattc tccagtgtct aaccgccagc gtcgtaatgc gcggcgggct      1440
     gcgaatttcc gcaaccaacg taatgttggt gcgacgggag ctttaagggc tcctattcca      1500
     ttacctgtgg ttcctgtacc acaagccctc aatcagcgca acctgcgcct acctaatggt      1560
     caagtctggg taaccagaaa accaaccgat tgggcggcta agactaatga tgccaacgac      1620
     gctatgttgt tgaagaccat ttttgatggt atacccgaaa tcaaaccgga caccaaggtg      1680
     ttccgtgttt tgattggttt cgtcgccgag tctgatggga cttttgggat agtggatggt      1740
     gttaccggtg acactgtgcc cgatctaccc attgttggta gattgggttt tcagaaaaat      1800
     gtgtaccgaa gccgagacat tgttctcgag ggaaaacctg ctgatcagct ttcagagaaa      1860
     gctatagtat ggtgcctcaa cactagtaag cgtgttgaga agcgggtgag attggctgac      1920
     ttttgggtcg ccatttcgaa accgaagccg ttgatgcctc ctccagattt tctggtcgag      1980
     gataattgac tggtgaatca cctcgaaggt aacttcgaga tgcctcacga cttaccagaa      2040
     gtagctggtt cgtgcgtgag atgcggattt cgcccacgga gagtgccaga tgcactctac      2100
     tggtggtgtg acatgtgcaa ttatttgcac tatgcatagt tacctcgcat ccgggtataa      2160
     atctatgaat ttcgctagaa cattccgaat cggacgattt ccacctgaaa aggtgagacc      2220
     tttgggtcga tgttctattg gttccgttaa taatattaat tattaacgat gcctccaatt      2280
     aaagagatgc                                                             2290
//