ID   JX429892; SV 1; linear; genomic RNA; STD; VRL; 2290 BP.
XX
AC   JX429892;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Blackberry chlorotic ringspot virus isolate Missouri 2 movement protein and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Blackberry chlorotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2290
RX   DOI; 10.1007/s00705-012-1523-4.
RX   PUBMED; 23108578.
RA   Poudel B., Tzanetakis I.E.;
RT   "Population structure of blackberry chlorotic ringspot virus in the United
RT   States";
RL   Arch. Virol. 158(3):667-672(2013).
XX
RN   [2]
RP   1-2290
RA   Poudel B., Tzanetakis I.E.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville,
RL   AR 72701, USA
XX
DR   MD5; f6fd361bcd54924effcb8a26b6d3d216.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2290
FT                   /organism="Blackberry chlorotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="Rosa multiflora"
FT                   /isolate="Missouri 2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:MO"
FT                   /isolation_source="leaf"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:339420"
FT   CDS             217..1116
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0DYT1"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0DYT1"
FT                   /protein_id="AFT91221.1"
FT                   /translation="MALTPKMTALTFSADDEASLEKAVTEVLAGSMELNMGIRRCAAFP
FT                   ATNTEAFLCELTTKETKTFIGKFTDKVRGRVFVDHAVIHLMYIPVILNTTDAIAELKIK
FT                   NLATGDELYGGTKVNLNEAFILTMTWPRSLFADEVNKHKGLYLGGVVSCAPHVPKSAKI
FT                   GMWSPMWTEKVSAKQLYQDTAKITNTRALETYTRTMISSDKEMRSLLRSRASIDIAAKS
FT                   KENPVLCSQYVNLLDQRVEGVDFTVKQIKPADVESLQLDEGPSSETVVLKPQLVSTDTT
FT                   TVDVDKPAIPASRNLLIA"
FT   CDS             1294..1989
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0E3F7"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:K0E3F7"
FT                   /protein_id="AFT91222.1"
FT                   /translation="MSVNRGRNGNSNGNRGCPNCFDGLDAAASNCARCNPSVSNRQRRN
FT                   ARRAANFRNQRNVGATGALRAPIPLPVVSVPQALNQRNLRLPNGQVWVTRKPTDWAAKT
FT                   NDANDAMLLKTIFDGIPEIKPDTKVFRVLIGFVAESDGTFGIVDGVTGDAVPDLPIVGR
FT                   LGFQKNVYRSRDIVLEGKPADQLSEKAIVWCLNTSKRVEKRVRLADFWVAISKPKPLMP
FT                   PPDFLVEDN"
XX
SQ   Sequence 2290 BP; 618 A; 483 C; 547 G; 642 T; 0 other;
     gtattctctg tgcataatac cacttactta aacaactccg aatcggacga tttccaactt        60
     tgaattccta caagttgagg tctttgggcc ggttgtttaa atttgtcaat cagataccac       120
     tatccgatcg aaggatctac cgatacaaac gttttcccga acgtcggttg ctgttgggat       180
     cgattggtta ggaccgtcat ttcagaaaag gttgaaatgg ctttgacccc aaagatgact       240
     gcgcttacat tctcagctga tgatgaagca tcactagaga aggctgtcac tgaagttctc       300
     gctggttcga tggagctgaa tatgggtata aggcgatgtg ctgcttttcc tgccaccaac       360
     actgaagcgt ttctttgtga attgactacc aaagaaacga aaacctttat cggtaagttc       420
     actgataagg ttcgtggtcg agttttcgtc gaccacgctg ttatacattt gatgtatata       480
     ccagtgattt tgaataccac cgatgctatt gctgaattaa agattaaaaa tttggctacc       540
     ggtgatgaat tgtatggtgg tacgaaggtt aatttaaacg aggcattcat tttaacaatg       600
     acttggcctc gatcattgtt cgctgatgag gtcaataagc acaaaggact ctacctcggt       660
     ggagtggttt cctgtgctcc tcatgttcct aagtccgcaa aaattgggat gtggtccccc       720
     atgtggactg agaaggtctc tgccaaacag ctgtatcaag atacagcaaa aatcacaaac       780
     acaagggcat tggagacgta cactcgaaca atgataagca gcgataaaga aatgcgtagc       840
     ctattgagaa gtcgtgcctc aatagatatt gccgccaagt caaaagagaa tcccgtactg       900
     tgctcccagt acgttaattt gcttgatcaa agagttgaag gtgttgattt taccgtcaag       960
     caaattaaac cagcagatgt tgaatccctt cagcttgatg aaggtcccag tagtgagact      1020
     gttgttttga aacctcaatt ggtttccact gataccacta ctgttgatgt tgataagcct      1080
     gctataccag caagtaggaa cttgctgatt gcctgaatac cgttttgatg ttaccatttc      1140
     cagatgtggg gagttcttag aagaaggggg tgtacctcgg tgtgactcga gtattaagtt      1200
     agtgaattct ttaatgaaag ataagctgct tcttgagctt acctgagatg tactagtact      1260
     ttgactaaga atccagacca accatccaac gccatgtctg tcaacagggg aaggaatggt      1320
     aactccaacg gtaacagagg ttgcccaaac tgtttcgacg gtttggatgc cgctgcttct      1380
     aattgcgcgc gatgtaatcc ctcagtatcc aaccgccagc gccgtaatgc gcggcgggct      1440
     gcaaatttcc gcaaccaacg taatgttggt gcgacgggag ctttgagagc tcctattcca      1500
     ttacctgtgg tttctgtacc acaagccctc aatcagcgca atctgcgctt gcctaatggt      1560
     caagtctggg taaccagaaa accaaccgat tgggcggcta agacaaatga tgccaacgac      1620
     gctatgttgt tgaagaccat ttttgatggt atacccgaaa tcaaaccgga caccaaggtg      1680
     ttccgtgttt taatcggttt cgtcgccgag tctgatggga cttttgggat agtggatggt      1740
     gttaccggtg acgctgtacc tgatctaccc attgttggta gattgggttt tcagaaaaat      1800
     gtgtaccgaa gccgagacat tgttcttgag ggaaaacctg ctgatcagct ttcagagaaa      1860
     gctatagtat ggtgcctcaa cactagtaag cgtgttgaga agcgggtgag attggctgat      1920
     ttttgggtcg ccatatcaaa accgaagccg ttaatgcctc ctccagattt tctggtcgag      1980
     gacaattgac tggtgaaaca cctcgaagga gacttcgaga tgcctcacga cttaccagaa      2040
     atagctggtt cgtgcgtgag atgcggattt cgcccacgga gagtgccaga cgcactctac      2100
     tggtggtgtg acatgtgcaa ttatttgcac tatgcatagt tacctcgcat ccgggtataa      2160
     atctatgaat ttcgctagaa cattccgaat cggacgattt ccacctgaaa aggtgagacc      2220
     tttgggtcga tgttctattg gttccgttaa taatattaat tattaacgat gcctccaatt      2280
     aaagagatgc                                                             2290
//