ID   JX429891; SV 1; linear; genomic RNA; STD; VRL; 2290 BP.
XX
AC   JX429891;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   17-MAR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Blackberry chlorotic ringspot virus isolate Missouri 1 movement protein and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Blackberry chlorotic ringspot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2290
RX   DOI; 10.1007/s00705-012-1523-4.
RX   PUBMED; 23108578.
RA   Poudel B., Tzanetakis I.E.;
RT   "Population structure of blackberry chlorotic ringspot virus in the United
RT   States";
RL   Arch. Virol. 158(3):667-672(2013).
XX
RN   [2]
RP   1-2290
RA   Poudel B., Tzanetakis I.E.;
RT   ;
RL   Submitted (26-JUL-2012) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Drive, Fayetteville,
RL   AR 72701, USA
XX
DR   MD5; 14de9c562e5849ae4720da07fc6568f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2290
FT                   /organism="Blackberry chlorotic ringspot virus"
FT                   /segment="RNA3"
FT                   /host="Rosa multiflora"
FT                   /isolate="Missouri 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:MO"
FT                   /isolation_source="leaf"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:339420"
FT   CDS             217..1116
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:K0E5T6"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:K0E5T6"
FT                   /protein_id="AFT91219.1"
FT                   /translation="MALTPKMTALTFSADDEASLEKAVTEALAGSMELNMGIRRCAAFP
FT                   ATNTEAFLCELTTKETKTFIGKFTDRVRGRVFVDHAVIHLMYIPVILNTTDAIAELKIK
FT                   NLATGDELYGGTKVNLNEAFILTMTWPRSLFADEVNKHKGLYLGGVVSCAPHVPKSAKI
FT                   GMWSPWWTEKVSAKQPYQDTAKITNTRALETYTRTMISSDKEMRSLLRSRASIDIAAKS
FT                   KENPVLCSQYVNLLDQRVEGVDFTVKQIKPADVESLQLDEGPSSETVVLKPQLVSTDTT
FT                   TVDVDKPAIPASRNLLTA"
FT   CDS             1294..1989
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0E211"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:K0E211"
FT                   /protein_id="AFT91220.1"
FT                   /translation="MSVNRGRNGNSNGNRSCPNCFDGLDAAASNCTRCNPPVSNRQRRN
FT                   ARRAANFRNQRNVGAMGPLRAPIPLPVVPVPQALNQRNLRLPNGQVWVTRKPTDWAAKT
FT                   NDANDAMLLKTIFDGIPEIKPDTKVFRVLIGFVAESDGTFGIVDGVTGDTVPDLPIVGR
FT                   LGFQKNVYRSRDIALEGKPADQLSEKAIVWCLNASKRVEKRVRLADFWVAISKPKPLMP
FT                   PPDFLVEDN"
XX
SQ   Sequence 2290 BP; 610 A; 493 C; 553 G; 634 T; 0 other;
     gtattctctg agcataatac cacttactca aacaactccg aatcggacga tttccaactt        60
     tgaattccta caagttgagg tctttgggcc ggttgtttaa atttgtcaat cagataccac       120
     tatccgatcg gaggatctac cgatacaaac gttttcccaa acgtcggctg ctgttgggat       180
     cgattggtta ggaccgtcat ttcagaaaag gttgaaatgg ctttgacccc aaagatgact       240
     gcgcttacat tctcagctga tgatgaagca tcattagaga aggctgtcac tgaagctctc       300
     gctggttcga tggagctgaa tatgggtata aggcgatgtg ctgcttttcc tgccaccaac       360
     actgaagcgt ttctttgcga attgaccacc aaagaaacga aaaccttcat cggtaaattt       420
     accgataggg ttcgtggtcg agtttttgtc gaccacgctg ttatacattt gatgtatata       480
     ccagtgattt tgaataccac cgatgctatt gctgaattaa agattaagaa tttagctacc       540
     ggtgatgaat tgtatggtgg tacgaaggtt aatttaaacg aggcattcat tttaacaatg       600
     acttggcctc gatcgttgtt cgctgatgag gttaataagc acaaagggct ctacctcggt       660
     ggagtggttt cctgtgctcc tcatgttcct aagtccgcaa aaattgggat gtggtcccca       720
     tggtggactg agaaggtctc tgccaaacag ccgtatcaag atacggctaa aattacaaat       780
     acaagggcat tggagacgta cactcgaaca atgataagca gcgataaaga aatgcgtagc       840
     ctattgagaa gtcgtgcctc aatagatatt gccgccaagt caaaagagaa tcccgtactg       900
     tgctctcagt acgttaattt gcttgatcaa agagttgaag gtgttgattt taccgtcaag       960
     caaattaaac cagcagatgt tgagtccctt caacttgatg aaggacccag tagtgagact      1020
     gttgttttga aacctcaatt ggtttccact gataccacta ctgttgatgt tgataagcct      1080
     gctataccag caagtaggaa cttgctgact gcctgattac cgtttcgacg ttaccatttc      1140
     cagacgtggg gagttcttag aatagggggg agtacctcgg tgtgactcga gtattaagtt      1200
     agtgaattct ttaatgaaag ataagctgct tcttgagctt acctgagatg tacaagtact      1260
     ttgactaaga atccagacca accatccaac gccatgtctg tcaacagggg aagaaatggt      1320
     aactccaacg gtaacagaag ttgcccgaac tgttttgacg gtttggatgc cgctgcttct      1380
     aattgcacgc gatgtaatcc tccagtgtcc aaccgccagc gccgcaatgc gcggcgggct      1440
     gcgaatttcc gcaaccaacg taatgttggt gcgatgggcc ctttaagggc ccctattcca      1500
     ttacctgtgg ttcctgtacc acaagccctc aatcagcgca acttgcgctt acctaatggt      1560
     caggtctggg taaccagaaa accgactgat tgggcggcca agactaatga tgccaacgac      1620
     gctatgttgt tgaagaccat ttttgatggt atacccgaaa tcaaaccgga cactaaggtg      1680
     ttccgtgttt tgattggttt cgtcgccgag tctgatggga cttttgggat agtggatggt      1740
     gttaccggtg acaccgtgcc tgatctgccc attgttggca gattaggttt tcagaaaaat      1800
     gtataccgaa gccgagacat tgctctcgaa ggaaaacctg ctgatcagct ttcagagaaa      1860
     gctatagtat ggtgcctcaa cgctagtaag cgcgttgaga agcgggtgag attggctgac      1920
     ttttgggtcg ccatatcgaa accgaagccg ttgatgcctc ctccagattt tctggtcgag      1980
     gacaattgac aggtgaaata cctcgaaggt gacttcgaga tgcctcacga cttaccagaa      2040
     atagctggtt cgtgcgtgag atgcggattt cgcccacgga gagtgccaga cgcactctac      2100
     tggtggtgtg acatgtgcaa ttatttgcac tatgcatagt tacctcgcat ccgggtataa      2160
     atctatgaat ttcgctagaa cattccgaat cggacgattt ccacctgaaa aggtgagacc      2220
     tttgggtcga tgttctattg gttccgttaa taatatttat tattaacgat gcctccaatt      2280
     aaagagatgc                                                             2290
//