ID JX401537; SV 1; linear; genomic RNA; STD; VRL; 2588 BP. XX AC JX401537; XX DT 14-JAN-2013 (Rel. 115, Created) DT 20-MAY-2013 (Rel. 116, Last updated, Version 3) XX DE Sclerotinia sclerotiorum mitovirus 3 RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Sclerotinia sclerotiorum mitovirus 3 OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RP 1-2588 RX DOI; 10.1016/j.virol.2013.03.002. RX PUBMED; 23541082. RA Khalifa M.E., Pearson M.N.; RT "Molecular characterization of three mitoviruses co-infecting a RT hypovirulent isolate of Sclerotinia sclerotiorum fungus"; RL Virology 441(1):22-30(2013). XX RN [2] RP 1-2588 RA Khalifa M.E.; RT ; RL Submitted (19-JUL-2012) to the INSDC. RL School of Biological Sciences, Auckland University, R338 Thomas building RL 110, 3A Symonds street, Auckland 1010, New Zealand XX DR MD5; 5d76f1966cc6a894fd3ef4b30895496a. XX FH Key Location/Qualifiers FH FT source 1..2588 FT /organism="Sclerotinia sclerotiorum mitovirus 3" FT /host="Sclerotinia sclerotiorum str. 16235" FT /isolate="NZ1" FT /mol_type="genomic RNA" FT /country="New Zealand" FT /collection_date="2005" FT /db_xref="taxon:1279099" FT 5'UTR 1..297 FT CDS 298..2436 FT /codon_start=1 FT /transl_table=4 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:L7SVU6" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:L7SVU6" FT /protein_id="AGC24232.1" FT /translation="MMKHLKLTTYKHLDLNINQADRFSNGAFAALSLKLWYPYVRLLIW FT SLRLDKPSFMKFATRIESLWIHNGLIFTVKYLKECLRICQHFVSGNPVLVTTEMPISIV FT RGIPTIIPGNLRLLMHSRDLSVIRGVLSLLSVFRIMKIPSTLKLESITGPFTGLDSTLP FT KYELIKIKQVLPVFPQIKPIKLKLLRSAGPNCKVSMLGIWLDIKAWSQHPNFKVLIEFI FT QLFPNYQDFRDMLLQEAYNLRLSIPSKDLHLGKLAIKEEAAGKARVFAITDSITQSVMG FT PISDAIFKMLRQIPMDGTFNQSAPLDRLVQLSKDGAIPEKDRVFYSYDLSAATDRLPIN FT LQKDILSIYCGESFALKWSILMTDRDWYLTKEKRNLRYSVGQPMGALSSWAMLALTHHF FT IVGLAANRVGKLGFDHYALLGDDIVIADKSVADSYYMIMTEILGVQINLSKSLVSTNSF FT EFAKRLVTLEGEVTPAGPANILLGLRSLNGIPSIILDMVNKGVPVSEESLESWMSTIPT FT VRKSQLEKVKWVVKGPFGFVPTAEGLASFLTMSSSLTPVRANQIIHAVRYTKFQWDLDM FT WTKVVKDNIGYRISISELYFPVGFQDYPLDFNESPIKMEIIKRLSQDLRDLGGQRPTFR FT LIFEGPIIMFNYYRQGYASEIVNYIKYLVHQEPEFKIGGSDPFLPRNFEAFAFSSKFKG FT QKFFEQVKEHLRANQLPF" FT 3'UTR 2437..2588 XX SQ Sequence 2588 BP; 813 A; 455 C; 487 G; 833 T; 0 other; tggggaccaa ccgaagttga tccagagagt aattctctta cgttttatcg cagacgtgag 60 cgaaccaaat ttgttttgat caaggttgga agttcgtcaa tcccccaata ggcgagatcg 120 ggagtaaaat cccgaagtct cacatgagta cttgtattca tctagaccta gacggtcctt 180 atgattaaat gttgttgaat ggtataacca tttccggagt atattatata ctcttagttc 240 ttgttaagaa cctacattta attttaaaga ttcaccaata atattacaaa taatacaatg 300 atgaaacact taaaattaac aacatataaa catcttgatt taaatataaa tcaagcggac 360 cgttttagca atggtgcatt tgcggctctt agtttaaaac tatgatatcc gtatgtgcgc 420 ctattgatct gatcacttcg attagacaag ccttcgttta tgaagtttgc aactcgtatt 480 gagtctttat ggatacacaa tggattaata ttcactgtta agtatcttaa agaatgtttg 540 cgaatttgcc aacactttgt atccggaaat ccagttttgg ttacgactga aatgccgatt 600 tccatagtga gaggtatacc tactattata ccgggaaact tgagactgct tatgcattct 660 cgagatcttt cggttattag aggtgtattg tctttattat cggttttccg tataatgaag 720 atcccctcga ctctgaagct tgaaagtata actggacctt ttacaggttt agattctact 780 cttccgaaat atgaattaat caaaattaaa caagttttac ctgtgtttcc acagattaaa 840 ccgattaaat tgaaacttct tagatcggcg ggccctaatt gtaaagtatc catgcttggt 900 atctgattag atattaaagc atgatctcaa catcctaatt ttaaggtatt aattgaattt 960 attcaactat ttccaaatta tcaggatttt agagatatgc ttttacagga ggcttataac 1020 cttagattat ctataccttc caaagattta catctcggaa aattagcaat caaggaagaa 1080 gctgctggta aagcacgggt ttttgcaatt actgatagta ttacacaatc agttatgggt 1140 cccatctcag atgctatctt caaaatgtta agacaaatcc ctatggatgg tacttttaat 1200 caaagtgccc ccttagatag attagtccaa ctttctaaag atggagcaat ccctgagaaa 1260 gatagagtct tttactctta tgatctttca gctgctaccg atagactacc aataaattta 1320 cagaaagata ttctttcaat ttattgtggt gaaagtttcg ccctaaagtg atcaatattg 1380 atgactgata gggattgata cttaaccaaa gagaaacgta atttacgtta ctctgtaggt 1440 caaccgatgg gagctttaag ttcatgagca atgttagctc ttactcatca tttcatagtt 1500 ggtttagcgg caaatcgagt tgggaaactc ggttttgacc attatgcctt acttggtgat 1560 gatatagtaa ttgctgacaa atctgtagca gattcctatt atatgatcat gactgaaatc 1620 ctcggtgttc aaatcaactt atcaaaatcg ctagttagta caaattcatt tgaatttgca 1680 aaacgattag taactttgga aggagaagtg acaccagcag gaccagcaaa catcttgtta 1740 ggcctaagaa gtcttaatgg aattccttcc attattttag acatggtcaa caagggtgtg 1800 ccggtttctg aggaatctct tgaatcatga atgagtacta tcccaactgt aagaaaatca 1860 cagctggaga aagttaagtg agtggtgaaa ggcccgtttg gatttgttcc tacagcagaa 1920 ggactagcat cgttcttgac gatgtctagt tcgctaactc ctgttagagc aaaccaaatt 1980 atccacgcag ttcgatatac taaatttcaa tgagatttag atatgtgaac taaagtggtt 2040 aaggataata taggttacag aatttcaatt tctgaactat atttcccggt tggattccag 2100 gattaccctc tagattttaa tgaatcacct attaagatgg agatcattaa aagactatct 2160 caagatttgc gggatttagg aggacaacgt cctactttcc gacttatctt tgagggtcct 2220 ataataatgt ttaattatta tagacaaggg tacgctagcg aaatagtgaa ctatattaaa 2280 tatttagttc accaagaacc tgagtttaag attggaggat ccgatccttt cttacctcgg 2340 aatttcgaag cgttcgcgtt ctcatctaag ttcaaaggac aaaagttctt tgaacaggtg 2400 aaagaacact tgagagcgaa tcagctccct ttctaggctt gcttaatcgg attgacaaat 2460 ccgctaaagc gaggcctctt aaaagaggcg gtataagctt tgatttgatt cataactacc 2520 taacgtatta agagcgatat cttaatatat tggataagat gtgagaatca catcagggct 2580 tatacccc 2588 //