ID   JX392808; SV 1; linear; genomic RNA; STD; VRL; 1584 BP.
XX
AC   JX392808;
XX
DT   31-JUL-2012 (Rel. 113, Created)
DT   31-JUL-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Alphacryptovirus JF-2012 RNA-dependent RNA polymerase (RdRp) gene, complete
DE   cds.
XX
KW   .
XX
OS   Alphacryptovirus JF-2012
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1584
RA   Liang Y.;
RT   "Studies of Chlorella vulgaris virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1584
RA   Liang Y.;
RT   ;
RL   Submitted (12-JUL-2012) to the INSDC.
RL   College of Life Science, Institute of Bioengineering, Zhejiang Sci-Tech
RL   University, Xiasha Road #2, Hangzhou, Zhejiang 310018, China
XX
DR   MD5; d58515fcda534fd05d067d0f9098e371.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1584
FT                   /organism="Alphacryptovirus JF-2012"
FT                   /host="Chlorella vulgaris"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="10-Aug-2011"
FT                   /clone="dsRNA6"
FT                   /db_xref="taxon:1211779"
FT   gene            106..1542
FT                   /gene="RdRp"
FT   CDS             106..1542
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:I7C245"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:I7C245"
FT                   /protein_id="AFO65948.1"
FT                   /translation="MRPSITGYDYTNFTQDLLKSDRKHPHVVRRETATTYRDDFAFKEV
FT                   VSFDRLAYIQRLEGWSRSYYLPEKHLEALLQYATPNVPCTALNLNVYCQAIQVVENGLR
FT                   SLQPVRAFDVLTELNQISYKQSSAAGYDYIGAKGPIDGENHKRTISRAKAVLWSVVKED
FT                   GEGIDHAIETSVPDVGYTRTQLADLTEKTKVRQVWGRAFHYILLEGLVAQPFIQSIMEG
FT                   PSFIHTGRDPTLSVPQSLAKVSSQCKYIYSLDWKSFDATVNRFEINTSFDIIKSKVIFP
FT                   NYETEQAFEITRQLFLHKKVAAPDGYIYEAHKGIPSGSYYTSMVGSIVNRLRIEYIWRI
FT                   ATGHGPIHCETLVDDSLCGDDIFVPATQLADIANRIGWYFNADKTEYSTIPEGVTFLGR
FT                   TSTGNLNSRDLTKCLRLLVYPEYPVTSGRISAYRARSIADDSGGLSDLLNQVAIRLERS
FT                   YGIASEEEIPAYFKRYVPFM"
XX
SQ   Sequence 1584 BP; 476 A; 350 C; 319 G; 439 T; 0 other;
     agaattttcc cctgataaat tatttatccg tgttgaactt acagcttcac ggcttatatc        60
     aggttggatt attatattca atacactcat ctgtttacat acaagatgag acccagcatt       120
     acaggttatg attacacaaa tttcacacag gatttgctta aatctgaccg taagcaccca       180
     cacgtcgtac gtcgcgagac tgcgactact tacagagacg actttgcttt caaggaagta       240
     gtttctttcg ataggttagc ttacatacag agattggaag gatggtcacg aagttactat       300
     ctaccagaga agcatttaga ggctttactc cagtatgcta cacctaatgt cccatgcact       360
     gctttgaacc ttaacgttta ttgtcaagct attcaagtag tagagaatgg gcttcgtagc       420
     cttcaaccag tgagggcctt tgatgttcta actgaactca atcaaatttc atacaagcag       480
     tcctcagctg caggttacga ttacatcggt gcgaaaggac ctattgatgg tgaaaaccac       540
     aaaaggacta tatcccgtgc taaagctgta ttgtggtctg tcgttaaaga agacggcgaa       600
     ggcatagatc atgctattga gacctcagta ccagacgtcg ggtacactcg cacacagttg       660
     gcagatttga ccgaaaagac aaaggttaga caagtttggg gccgtgcatt tcattacatc       720
     cttttagaag gacttgtagc acaaccattt attcaatcaa taatggaagg accctcgttt       780
     atccacaccg gtcgagatcc aacactcagc gttccgcaat cattggctaa agttagctcg       840
     caatgcaaat acatctattc attagattgg aagtcgtttg acgcaaccgt taatcggttc       900
     gaaatcaaca catcttttga catcattaaa tcaaaggtca tctttcctaa ctatgaaact       960
     gaacaagcat ttgagataac cagacagctc tttcttcaca agaaggtagc cgcacccgat      1020
     ggttatattt acgaagcgca caaaggaatt ccatcaggaa gttactacac ctcaatggtc      1080
     ggatcaatcg tgaatcgact aaggatcgag tacatctgga gaatcgcaac aggacatggt      1140
     ccgatacact gcgagacttt agtagacgac tctctctgcg gagatgatat cttcgttcca      1200
     gctacacagt tggccgatat cgcaaaccgc ataggttggt acttcaatgc cgataagacg      1260
     gaatactcaa ctataccaga aggcgtcacc tttctaggac gaacgtcaac cggaaactta      1320
     aactcaagag atttaaccaa atgtcttcga ctattagttt accccgagta tcctgttaca      1380
     tcaggccgaa tttccgccta tagagctagg tcaatagctg acgactcagg aggtctcagc      1440
     gatttgctta accaagttgc tattaggtta gagcgtagtt atggcattgc ttcggaagaa      1500
     gaaattccag cttattttaa acgttatgta ccatttatgt aactttattt ataaacgctt      1560
     tggaggcttt ataaaccccc tact                                             1584
//