ID JX315325; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC JX315325; XX DT 25-SEP-2012 (Rel. 114, Created) DT 25-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Dolichos yellow mosaic virus clone JD18, complete genome. XX KW . XX OS Dolichos yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Jyothsna P., Malathi G.V.; RT "First record of Luffa leaf distortion betasatellite association with RT Dolichos yellow mosaic disease"; RL Unpublished. XX RN [2] RP 1-2761 RA Jyothsna P., Malathi G.V.; RT ; RL Submitted (17-JUL-2012) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute RL (IARI), Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; e1df90df12455b5eb85755cd2ee6b5b9. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Dolichos yellow mosaic virus" FT /host="Dolichos" FT /mol_type="genomic DNA" FT /country="India:Bihar, Samastipur, Aadharpur" FT /collection_date="07-Dec-2011" FT /identified_by="Jyothsna P" FT /clone="JD18" FT /db_xref="taxon:333968" FT gene 123..410 FT /gene="AV2" FT CDS 123..410 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:J9XRA9" FT /db_xref="InterPro:IPR002048" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:J9XRA9" FT /protein_id="AFS32145.1" FT /translation="MWDPLVNDFPDTLHGLRCMLAVKFVQELLETYPRDSNGRILLEEL FT IQVLRCKSYAKAQFRYGVFFSKAHNTSKGNLRRSVRNTDDSSSNSEQQSS" FT gene 283..1056 FT /gene="AV1" FT CDS 283..1056 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J9XR71" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J9XR71" FT /protein_id="AFS32144.1" FT /translation="MPKRNFDMAFSSPRPTTRRRVTLDVPSATQMTVRRTPSSNRRKSW FT QNRPMYRKPRLYRLYRSRDVPYGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNNLTH FT RVGKRFCVKSVYIMGKIWMDENIKTKNHTNTVMFWLVRDRRPFGTPMDLGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFDSTVTGGQYASREANIIKRFWRVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN" FT gene complement(1073..1483) FT /gene="AC3" FT CDS complement(1073..1483) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:J9XX75" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9XX75" FT /protein_id="AFS32147.1" FT /translation="MTDSRTGESITAAQLQNGVFIWELKNPLSFKILEHHEGFLFDPNQ FT HRTKIRIMFNHGLKKALGIHKAFLDFVIYHRLTPHSGRILNVFRNFLFRFLNNLGIISV FT NNVLRGCEYVLYDVFQRVEAVDFEYNVQWKLY" FT gene complement(1203..1631) FT /gene="AC2" FT CDS complement(1203..1631) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:J9XTD4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9XTD4" FT /protein_id="AFS32143.1" FT /translation="MRSSSPSNSHCSLPSIKVQHRQAKKRKTIRRKRIDLTCGCSYYLN FT INCRNDGFTHRGIHHCSSTTEWRVYLGAKESPVFQNPGASRGVPVRSEPTQNQDPHNVQ FT PRVEESVGDTQGIFGLCDLPSIDSAFWADLECIQELPV" FT gene complement(1537..2634) FT /gene="AC1" FT CDS complement(1537..2634) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /db_xref="GOA:J9XV57" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9XV57" FT /protein_id="AFS32146.1" FT /translation="MRTPGFRISARNIFLTYPKCSLSKEEALDQLCRIECPSDKLFIRV FT AQEAHQDGTMHLHALVQFKGKAQFRNARHFDLTHPHSTQIFHGNVQGAKSSSDVKSYIT FT KDGDYVDWGTFQIDGRSARGGRQTADDAVASALNSGTVQGALSIIKELLPHNYVFQYHN FT LRCNLERIFAPPISVYTSYYKPSDFSQVPSVMTDWAENNVVDPSWRSDPAARPRRPISI FT VVEGATRTGKTLWARSLGAHNYMCGHLDLSPKIFSNDAWYNVIDDVDPHYLKHFKEFMG FT AQMDWQSNIKYGKPTQIKGGIPTIFLCNPGPRSSYKEFLDEEQNESLKEWAYKNAIFIT FT LEQPLFSTEHQGTASTSEEAQNDSA" FT gene complement(2235..2480) FT /gene="AC4" FT CDS complement(2235..2480) FT /codon_start=1 FT /gene="AC4" FT /product="PTGS suppressor" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9XTD8" FT /protein_id="AFS32148.1" FT /translation="MGLCISMPSSSSRVRPSSEMQDISTLPILIAHRFSMEMSREQRAH FT LMSNPTSPRTVTTSTGEHFRSTDDLLEEVVRQLTML" XX SQ Sequence 2761 BP; 743 A; 613 C; 612 G; 793 T; 0 other; accggatggc cgcccgcccg ccacgtgtct taatcctgac gctccgtgga gtcttattta 60 gcgctttcac atttcaaatt tcactataaa acttgcgctc gaagtcttgc gcaactatct 120 aaatgtggga cccattggtc aatgattttc ctgacacact gcatggattg cggtgtatgt 180 tggctgtgaa atttgtgcag gaattattgg agacctatcc gcgtgactct aatgggcgca 240 tcctattgga ggaactaatc caggtgttgc gttgtaagag ttatgccaaa gcgcaatttc 300 gatatggcgt tttcttctcc aaggcccaca acacgtcgaa gggtaacctt agacgttccg 360 tccgcaacac agatgacagt tcgtcgaact ccgagcagca atcgtcgtaa atcatggcag 420 aatcgcccca tgtaccgcaa accgcggtta tatcgtttat atcgctctcg cgatgtacca 480 tatggctgcg agggtccttg taaggtccaa tcatttgaac aaagacatga cgttagtcat 540 actggtaagg tcatgtgtat ttccgatgtt actagaggaa ataatctaac tcatcgtgtt 600 ggtaaacgat tttgtgtgaa atctgtttac attatgggca agatctggat ggacgagaac 660 atcaagacta aaaaccatac aaataccgtc atgttttggt tagtccgtga tcgacgacct 720 tttggaacgc caatggattt aggtcaagtt ttcaacatgt atgataatga accctcgacc 780 gccacaatca aaaacgatct acgcgatcgt taccaagtct tacgcaagtt cgattcaact 840 gttaccggag gtcaatatgc gtcgagggaa gcaaatataa tcaagagatt ttggcgtgtc 900 aacaactatg tggtatacaa ccaccaagaa gctgctaagt atgagaatca tacagaaaat 960 gcattattat tgtacatggc atgtactcat gcctcaaatc ctgtgtatgc aacattaaag 1020 atcaggatct atttctatga ttcgatctca aattaataaa acgatacttt tattaatata 1080 acttccattg tacattatat tcgaaatcaa ctgcttcgac tctttgaaat acatcataca 1140 acacatattc gcaaccgcgt aatacattgt tcactgaaat aattcctaaa ttatttagaa 1200 atctaaacag gaagttcctg aatacattca agatccgccc agaatgcgga gtcaatcgat 1260 ggtaaatcac aaagtccaaa aatgccttgt gtatccccaa cgctttcttc aacccgtggt 1320 tgaacattat gcggatcttg gttctgtgtt ggttcggatc gaacaggaac ccctcgtgat 1380 gctccaggat tttgaaagac aggggattct ttagctccca aataaacacg ccattctgta 1440 gttgagctgc agtgatggat tcccctgtgc gtgaatccgt catttcggca gttgatattc 1500 aggtaatacg aacagccaca cgtcagatcg attcgcttac gccgaatcgt tttgcgcttc 1560 ttcgcttgtc gatgctgtac cttgatgctc ggtagagaac aatggctgtt cgagggtgat 1620 gaagatcgca tttttgtaag cccactcctt caatgattcg ttctgttcct cgtcaaggaa 1680 ctctttatag gacgaacgtg gtcctggatt gcagagaaag atggtgggta ttccaccttt 1740 aatttgagtg ggcttaccgt atttgatatt gctttgccag tccatctggg cccccataaa 1800 ctctttaaaa tgctttaaat aatggggatc aacgtcatca atgacgttat accaagcatc 1860 gttcgaaaat atctttggac taagatccag atgtccacac atgtaattat gggcccctaa 1920 tgaccgggcc cacaatgtct tccctgttct cgttgctcct tcaacgacga tgcttatcgg 1980 tctcctcggc cgcgcagcgg gatcgctcct ccaagacgga tcaacaacgt tattttctgc 2040 ccagtctgtc ataacagacg gcacttgact aaagtcgctt ggcttgtaat acgaggtgta 2100 aactgaaatt ggaggagcga atatacgttc aaggttacat ctcagattgt ggtactggaa 2160 cacataattg tgtggaagta attctttaat aatgctcaga gcaccttgaa ccgtaccgga 2220 attcaacgcc gatgctacag catcgtcagc tgtctgacga cctcctctag cagatcgtcc 2280 gtcgatctga aatgttcccc agtcgacgta gtcaccgtcc ttggtgatgt aggatttgac 2340 atcagatgag ctctttgctc cctggacatt tccatggaaa atctgtgtgc tatgaggatg 2400 ggtaaggtcg aaatgtcttg catttcggaa ctgggcctta cccttgaact ggacgagggc 2460 atggagatgc atagtcccat cctggtgtgc ttcttgtgcg actctgatga acaatttgtc 2520 cgatggacac tcaatgcgac agagctgatc gagagcttct tctttagaga gcgagcattt 2580 gggataggtc agaaatatat ttctggcaga tatgcggaag cctggagttc tcattataaa 2640 aatgagatta atgccacgtc atcggtgtat cggtgtcgct tcaaagttcc cagaattggt 2700 gtcattggtg tcgcatatat aggggtctct aataaggggt acggccatcc gctataatat 2760 t 2761 //