ID   JX310549; SV 1; linear; genomic RNA; STD; VRL; 920 BP.
XX
AC   JX310549;
XX
DT   25-SEP-2012 (Rel. 114, Created)
DT   11-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Cowpea mild mottle virus isolate Venezuela coat protein gene, partial cds;
DE   and nucleic acid binding protein gene, complete cds.
XX
KW   .
XX
OS   Cowpea mild mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-920
RX   DOI; 10.3390/v4123804.
RX   PUBMED; 23242372.
RA   Brito M., Fernandez-Rodriguez T., Garrido M.J., Mejias A., Romano M.,
RA   Marys E.;
RT   "First Report of Cowpea Mild Mottle Carlavirus on Yardlong Bean (Vigna
RT   unguiculata subsp. sesquipedalis) in Venezuela";
RL   Viruses 4(12):3804-3811(2012).
XX
RN   [2]
RP   1-920
RA   Brito M., Thaly F.-R., Mario G., Alexander M., Mirtha R., Marys E.;
RT   ;
RL   Submitted (15-JUL-2012) to the INSDC.
RL   Centro de Microbiologia y Biologia Celular, Instituto Venezolano de
RL   Investigaciones Cientificas, C Panamericana Km 11, San Antonio de los
RL   Altos, Miranda 1020, Venezuela
XX
DR   MD5; 6ebb5072ef9d28630ce31dae41dc72c2.
DR   EuropePMC; PMC3528291; 23242372.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..920
FT                   /organism="Cowpea mild mottle virus"
FT                   /host="Vigna unguiculata subsp. sesquipedalis (L.) Verdc"
FT                   /isolate="Venezuela"
FT                   /mol_type="genomic RNA"
FT                   /country="Venezuela"
FT                   /collection_date="10-Feb-2010"
FT                   /PCR_primers="fwd_name: carla cp, fwd_seq:
FT                   ggbytnggbgtnccncanga, rev_name: m4t, rev_seq:
FT                   gttttcccagtcacgactttttttttttttttt"
FT                   /db_xref="taxon:67761"
FT   CDS             <1..492
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:J9XVJ1"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:J9XVJ1"
FT                   /protein_id="AFS33782.1"
FT                   /translation="EHVAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILSDSVIAAL
FT                   RKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKWDDRYAAFDCFEYVENPAAIQ
FT                   PAEGLIRKPTPSEKIAHNTYKRLALDRSNRNEIYSNLNTEVTGGTLGPEISRNFNHAKK
FT                   "
FT   CDS             495..803
FT                   /codon_start=1
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="GOA:J9XXT0"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:J9XXT0"
FT                   /protein_id="AFS33781.1"
FT                   /translation="MIGYKRIAILLYLCSLKLNKVLPFDLCVLIALKAGPTSLYSGSSS
FT                   YARRRRAKLIGRCHRCYRVNPGFYFTTRCDGLTCVPGLSYKHWVESFIRFGYFAREE"
FT   3'UTR           804..920
XX
SQ   Sequence 920 BP; 244 A; 177 C; 217 G; 282 T; 0 other;
     gagcatgtag ctgaggtatt gctgcaggtg gccatttact gtaaagatgt gagctcttca        60
     agttttatgg actcaagtgg tacatttgat tggaaaggtg gatccatact gtctgattct       120
     gttatagctg ctttgcgcaa ggatgataat accctgagga gagtgtgtcg cctctatgca       180
     cccattactt ggaactttat gctgacccat aaagctcccc cttctgattg ggctgctatg       240
     ggtttcaaat gggatgatcg atatgcagca tttgattgct ttgaatacgt tgaaaatccg       300
     gcagcaattc aaccagctga gggattgata agaaaaccca cgccaagcga gaaaattgct       360
     cataatactt acaaacggct ggcacttgat aggtcaaaca gaaacgaaat atattcaaac       420
     ttgaacactg aagttacagg tggcaccttg ggcccggaga tttcaagaaa tttcaaccac       480
     gctaaaaagt gatcatgatt ggatacaagc gcatagccat cctgctttat ctatgctcat       540
     taaaattaaa taaagtgttg ccttttgatt tgtgtgtttt aattgccctt aaggctggac       600
     ctactagttt gtactcaggg tcttccagct acgctcgtcg tcggcgggct aagttgatag       660
     gtcggtgtca tcgttgctat cgagtcaatc ctggttttta ctttactact agatgtgatg       720
     gtttaacttg tgtgccgggt ttaagctaca aacattgggt cgagtctttc attagatttg       780
     gctacttcgc gagggaggag taactgaggt gataccccct cttaactcta gaaccaagga       840
     gagagtataa agagtccttg tgtagcttca gacctaactg ttgaagtgtg aaccggtttt       900
     aaagttattt tcctggtttt                                                   920
//