ID JX297511; SV 1; linear; genomic RNA; STD; VRL; 2334 BP. XX AC JX297511; XX DT 24-SEP-2012 (Rel. 114, Created) DT 22-AUG-2014 (Rel. 121, Last updated, Version 2) XX DE Sclerotinia sclerotiorum partitivirus 1 strain SsPV1-WF-1 RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Sclerotinia sclerotiorum partitivirus 1 OC Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae. XX RN [1] RP 1-2334 RX DOI; 10.1128/JVI.01036-14. RX PUBMED; 24965462. RA Xiao X., Cheng J., Tang J., Fu Y., Jiang D., Baker T.S., Ghabrial S.A., RA Xie J.; RT "A novel partitivirus that confers hypovirulence on plant pathogenic RT fungi"; RL J. Virol. 88(17):10120-10133(2014). XX RN [2] RP 1-2334 RA Xie J., Xiao X., Fu Y., Jiang D., Ghabrial S.A.; RT ; RL Submitted (10-JUL-2012) to the INSDC. RL Plant Pathology, College of Plant Science and Technology, Huazhong RL Agricultural University, Shizishan No. 1, Wuhan, Hubei 430070, China XX DR MD5; ade090d2043664691fa05250ef87411f. DR EuropePMC; PMC4136314; 24965462. XX FH Key Location/Qualifiers FH FT source 1..2334 FT /organism="Sclerotinia sclerotiorum partitivirus 1" FT /segment="1" FT /host="Sclerotinia sclerotiorum strain WF-1" FT /strain="SsPV1-WF-1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="20-May-2010" FT /db_xref="taxon:1232468" FT CDS 93..2207 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:J9UVL6" FT /db_xref="UniProtKB/TrEMBL:J9UVL6" FT /protein_id="AFR78160.1" FT /translation="MDSIRNIFQELRQTNVLEWKLFQKFGQTTTNPTYSHPDADLRRIQ FT ETFRDPHLERSQTQEFKLHYTDTYSGFRESDLSKNEDFEFYKPIDPSSIPASRLPAPGI FT SVLPIRTHAEQVITATEQVPETGYQLHPLLRHLIVSKYPLYMQHATKLCRPLGTTDATF FT DDFNREQKQYPPIEPELALRIVRIIIHLLYALPFLPLHYIDTFFCKMPLHTGTSYFYRH FT SYELRTHVAFSAPSEYENKQTSKGYFFNAFTSWARTVAHRIKEFGYPFDPTQLTPSEIT FT DKLRSFFMEHATMLFTRNHISDRDGALKQRPVYAMDTLFLHLEAMITFPLHVLARSSRS FT AIMYSMETIRGGCARMDALASSCQSYLCIDWSSFDQRMPWIIVDLFFTLFLPLLLIISH FT GYQPTAEYSEYLGLTPDKMFSRLFNIISFLRLWYYNCVFVTADGYAYVRRFAGIASGML FT NTQYLDSFCNLFLMIHALLHFGCTNEEILDFIYFVMGDDNVILTQWTIDRLFSFLTFFE FT SHSLSRFGMVISTKKSVITSLRSRIEMLGYQCNCATPKRPISKLVAQLCYPEHGPNDKY FT MSSRAVGMAWASAGYDAEFFAFCKDVHTLFTPFAAPPSEQTTQTILKHLPGLFKMLDDV FT TEFTNPQAFPDIMTVRNRYATWQGELSPDKKWSRAHFLRRPDDTPLPFQTMFEYMSEHG FT ITFPEPQQLF" XX SQ Sequence 2334 BP; 628 A; 728 C; 357 G; 621 T; 0 other; agaaaacttg caacgcgccc gcagactttc tacaagcgcc ccttcaagca gatttattct 60 gaccctattc tacacaactc tctcccgtca acatggattc tatccgtaac atctttcaag 120 aactccgcca aacaaatgtt ttggaatgga aactcttcca gaaatttgga cagactacca 180 cgaacccgac ctactcgcac cccgacgctg acctccgacg aattcaagaa accttccgtg 240 acccacatct cgaacgctca caaactcaag aattcaaact gcattatacc gacacttact 300 ctggcttccg cgaatccgat ctctccaaaa atgaagactt cgaattctac aaacccattg 360 acccgtcatc tatccccgcc tcaagactcc ccgctcctgg catctccgta cttccaatcc 420 gtacgcacgc agaacaagtc atcaccgcaa ccgaacaagt ccccgaaact ggttatcaac 480 tccatcccct tctccgtcac cttattgtat caaagtatcc cctttacatg caacacgcta 540 caaaactctg ccgaccactt ggcactactg acgctacctt cgacgatttc aatcgcgaac 600 aaaaacagta tcctccgatc gaaccagaac ttgctctccg cattgtacgc atcataatcc 660 acttgttata cgcacttcct tttcttcccc tccactacat cgacactttc ttttgtaaaa 720 tgcccttgca cactggaact tcctacttct accgacattc ttacgaatta cgtacccacg 780 ttgccttctc agccccttcc gaatacgaaa acaagcaaac ctctaaaggt tacttcttta 840 acgctttcac atcatgggcc cgcaccgtcg ctcacaggat taaagaattt ggatatccct 900 tcgacccgac tcaactcact ccttctgaaa ttacagacaa gttacgctcc ttttttatgg 960 aacatgcaac tatgctcttc actcgcaatc acatctctga ccgcgatggc gcattaaagc 1020 aacgacctgt ttacgcaatg gacacactct ttttgcactt agaagcaatg attaccttcc 1080 ccctccacgt actcgcacga tcttcccgat ccgccataat gtacagcatg gaaacaatcc 1140 gtggtggatg tgcccgaatg gacgcacttg catcctcatg ccaatcatat ttatgtattg 1200 actggtcctc ctttgaccaa cgcatgcctt ggataatagt cgatctcttc ttcactctct 1260 tcctcccact cctgctcatc atttcacatg gctatcagcc cactgctgaa tactccgaat 1320 acctaggact cacccccgac aagatgttct caagactctt caacatcatc tcattcctta 1380 gactatggta ttacaactgt gtcttcgtta ctgccgatgg ctacgcttat gtacgccgct 1440 ttgctggcat cgcatctggt atgcttaaca cacagtacct cgactccttt tgcaatctat 1500 tcctaatgat acacgctctt ttgcactttg gatgtaccaa tgaagaaatt cttgacttta 1560 tctatttcgt tatgggcgac gacaacgtca tccttacgca atggacaatc gaccgcctct 1620 tctctttctt aaccttcttc gaatcacact ctctctccag atttggtatg gttatctcga 1680 ccaaaaagtc agtcattaca agcctacgct cccgcatcga aatgcttggt taccaatgta 1740 actgtgcaac tccgaaacgg cctatctcaa agctagtcgc tcaactctgc tacccagagc 1800 acggacccaa cgacaaatac atgtcgtccc gcgctgttgg aatggcatgg gcctccgctg 1860 gctatgacgc tgaattcttt gccttttgca aagacgtcca caccctgttt actccgtttg 1920 cagctcctcc aagcgaacag acaacacaga ctattttgaa acaccttccc ggtttattca 1980 aaatgctcga cgacgtcaca gaattcacga atcctcaggc tttccccgac atcatgaccg 2040 tccgcaaccg gtacgccact tggcaaggtg aactctcacc cgacaagaaa tggtcccgcg 2100 cgcacttcct ccgccggcct gatgatactc ccctcccctt ccagactatg tttgaataca 2160 tgtccgaaca tggcatcaca ttccctgaac cgcaacagct gttctaaaac aagtcactcc 2220 ttcacctcgt taattatacg ttttaggtag tacatgctca atctttgact catactcatt 2280 ttgatttaaa acaaaaaaaa aaaaaaaaaa attaaaataa acctaataaa ataa 2334 //