ID JX297510; SV 1; linear; genomic RNA; STD; VRL; 2292 BP. XX AC JX297510; XX DT 24-SEP-2012 (Rel. 114, Created) DT 22-AUG-2014 (Rel. 121, Last updated, Version 2) XX DE Sclerotinia sclerotiorum partitivirus 1 strain SsPV1-WF-1 putative capsid DE protein gene, complete cds. XX KW . XX OS Sclerotinia sclerotiorum partitivirus 1 OC Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae. XX RN [1] RP 1-2292 RX DOI; 10.1128/JVI.01036-14. RX PUBMED; 24965462. RA Xiao X., Cheng J., Tang J., Fu Y., Jiang D., Baker T.S., Ghabrial S.A., RA Xie J.; RT "A novel partitivirus that confers hypovirulence on plant pathogenic RT fungi"; RL J. Virol. 88(17):10120-10133(2014). XX RN [2] RP 1-2292 RA Xie J., Xiao X., Fu Y., Jiang D., Ghabrial S.A.; RT ; RL Submitted (10-JUL-2012) to the INSDC. RL Plant Pathology, College of Plant Science and Technology, Huazhong RL Agricultural University, Shizishan No. 1, Wuhan, Hubei 430070, China XX DR MD5; 344405d92329b31366258f661a4c1889. DR EuropePMC; PMC4136314; 24965462. XX FH Key Location/Qualifiers FH FT source 1..2292 FT /organism="Sclerotinia sclerotiorum partitivirus 1" FT /segment="2" FT /host="Sclerotinia sclerotiorum strain WF-1" FT /strain="SsPV1-WF-1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="20-May-2010" FT /db_xref="taxon:1232468" FT CDS 83..2119 FT /codon_start=1 FT /product="putative capsid protein" FT /db_xref="UniProtKB/TrEMBL:J9VD97" FT /protein_id="AFR78159.1" FT /translation="MSSSVATRAARIPNKNSTVEFKAVDVPDNSLDILAQFKTATSAST FT QFANEYVIDFFPNMIVPIMYIMLIANRVSQDSGSRAHPKVSSATISAYLVSLLYGYFLG FT SDAYVRPSPSSHARVWKNSTYKTEFMEFLMTLPVPDCLLPILNQYAPAQTTRSTNIFCI FT PSAAGFTLETHFGRFIPVNFFTTLHDLGATLPGNSSPQAVLHELATTILHGFVSNELYV FT ADILGYAYSSSGNGTYINSKFYQIFSSVFNPVLFRDQQRRPTLAATDLIAPSAGTDHPN FT AYDVLFAASPDNLPELQIVFQTVSAYLDGQLKCSSTLGSLLSKPEGTKIFDHGYSAYAL FT PIWIKNDPTSIGHHTATTRLRLASPAVRAATISFLSPPATRPTAATAVTDVIYDEANPP FT VTHDLPADTAIHHTWPFSLLSSAAAATVFPVLSTTNAPNGNTVIFNSELHTTPKVMVLD FT TSDISTIAADLVTLSGKIIESFEIDGSTIEMPNEFKNLGLQNSMFADSAVPYVHCISAT FT AFYPRTAGSILPPLHRSNPTTGRSLPASSLMIDRTMVYLPQVDATDYAHGNMSTSIIDA FT PAPTGLAGLTQTRRTDWLRYLQSFLGFKTATTVNTTTKLAHMEEQRLLAWSPYSYNPAR FT SSDDHTPAYDAEPHYFLLNLRTFFGTDCKLVMTQHPYKAMPVA" XX SQ Sequence 2292 BP; 488 A; 870 C; 357 G; 577 T; 0 other; cccggacaga attctacaac tgtctcaagc cccttacaag caattaactt tgaccctttt 60 ctacacaaac ctctcgaaca atatgtcttc ctccgtcgcc acccgcgccg ctcgcatccc 120 taacaagaac tccaccgtcg aattcaaggc cgttgacgtc cccgacaact ccctcgacat 180 cctcgcccag ttcaagaccg caacctccgc ctccacccag tttgccaatg aatatgttat 240 cgacttcttt cctaacatga tcgtccccat catgtatatc atgctcatcg ccaaccgtgt 300 ctcccaagac tctggatccc gcgcccaccc aaaggtctcc tccgccacca tctctgccta 360 cctggtctcc ctcctctatg gctatttcct tggctccgat gcttacgtcc gcccctctcc 420 gtcctcccac gcccgcgtct ggaaaaactc tacttataag actgaattca tggaatttct 480 catgaccctc cctgttcctg actgcctcct cccgattctg aaccaatatg ctcccgccca 540 aaccactcga tctacaaaca tcttctgcat cccctctgct gctggattca ccctcgaaac 600 ccactttggc cgcttcatcc ccgtcaactt cttcaccact ctccacgatc tcggtgcaac 660 tctccctgga aattcgtctc cccaagccgt tctccacgaa cttgccacca ccatcctcca 720 cggattcgtg tcgaatgaac tctatgttgc cgacatcctt ggatacgctt actctagctc 780 tggaaatggt acttacatca actctaagtt ttaccaaatc ttcagctccg tattcaaccc 840 cgtcctcttc cgcgatcaac agcgccgccc caccctcgcc gccactgatc tcatcgctcc 900 tagcgccgga accgaccacc ccaacgcata cgacgttctt tttgccgcct ctcccgacaa 960 cctccccgaa ttgcaaatcg tgttccaaac cgtctctgct tacctcgatg gacaattaaa 1020 gtgctcctca actctcggct ctctcctctc taagcccgaa ggcaccaaga ttttcgacca 1080 tggctactca gcctacgccc tccccatctg gattaagaac gaccctacct ccattggaca 1140 ccataccgca acgactcgcc tccgcctcgc ttcccccgcc gtccgcgccg caaccatttc 1200 gttcctctct ccccccgcaa ctcgtcccac cgccgcaacc gccgttactg acgtcattta 1260 tgacgaagcc aaccctccag taacccacga ccttcccgcc gacaccgcca ttcaccacac 1320 ctggcccttc tcgctcttgt cgtctgccgc tgccgctact gtcttccccg tgctctcgac 1380 caccaacgcc ccaaatggta acactgtcat tttcaactct gagctccaca ctaccccaaa 1440 agtaatggtc ctcgacacct ccgacatctc caccatcgcc gccgacctcg tcacgctctc 1500 tggtaaaatt attgaatctt ttgaaatcga tggctctacc atcgaaatgc ccaatgagtt 1560 taagaacctc ggacttcaaa actccatgtt cgccgactct gccgttcctt atgtacactg 1620 catttccgct accgctttct acccccgcac cgctggctcg atccttcccc ccctccaccg 1680 atccaacccc accaccggtc gctccctccc cgcctcctct cttatgattg accgtacaat 1740 ggtttatctt ccccaagttg atgcaactga ctatgcccat ggaaacatga gtactagcat 1800 catcgacgct cccgccccca ctggtctcgc tggtcttact cagacccgcc gcactgactg 1860 gctccgctac ttgcaatcct tccttggatt caagaccgcc accacagtca atacgaccac 1920 caagctggcc cacatggaag aacagcgcct cctcgcctgg tccccgtact cgtacaatcc 1980 cgcccgctca tccgacgacc acactcccgc ctatgacgcc gagccccact acttcctcct 2040 taacctcaga accttcttcg gtactgactg caagttagtg atgactcagc atccctacaa 2100 ggccatgccc gtcgcttgaa tctcttccgc tctcctttag ttcgttccga ctcttgattt 2160 ctttttagtc gtgttcacta tgctttagtt tgctggatat aggccaaatt atgcccgaat 2220 tgtttttgtt cttttttgaa ttttacaaat atgaacatca ttcccttttc tacgaaaaaa 2280 aaaaaaaaaa aa 2292 //