ID   JX294487; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
XX
AC   JX294487;
XX
DT   24-SEP-2012 (Rel. 114, Created)
DT   24-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tobacco streak virus isolate tsv-onion-Tamilnadu nucleocapsid protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-717
RA   Sujitha A., Bhaskara Reddy B.V., Sivaprasad Y., Usha R.,
RA   Giridhar Krishna T.;
RT   "Molecular characterization of Tobacco streak virus infecting various crops
RT   in India";
RL   Unpublished.
XX
RN   [2]
RP   1-717
RA   Sujitha A., Bhaskara Reddy B.V., Sivaprasad Y., Usha R.,
RA   Giridhar Krishna T.;
RT   ;
RL   Submitted (10-JUL-2012) to the INSDC.
RL   Genomics Lab, Institute of Frontier Technology, Regional Agricultural
RL   Research Station, Acharaya N.G. Ranga Agricultural University, Tirupati,
RL   Andhara Pradesh 517502, India
XX
DR   MD5; 6239218dbe4d1031fedecdf7065c8356.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..717
FT                   /organism="Tobacco streak virus"
FT                   /host="Allium cepa (onion)"
FT                   /isolate="tsv-onion-Tamilnadu"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tamilnadu"
FT                   /collection_date="Mar-2012"
FT                   /db_xref="taxon:12317"
FT   CDS             1..717
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q8UYC4"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UYC4"
FT                   /protein_id="AFR78248.1"
FT                   /translation="MNTLIQGPDHPSNAMSSRTNNRFNNNSRCPTCFDELDAVARGCPA
FT                   HAPANTVSRRQRRNAARAAAFRNANARMTAPIPVVPVSRPQAKTSLKLPNNQVWVTRKA
FT                   SEWSAKTIDTNDAIPFKTIVEGIPEINSETKFYRLLIGFVAVSDGTFGMVDGVTGDVIP
FT                   DPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAIVWCLDERRRDAKRVQLAGYWIAIS
FT                   KPAPLMPPEDFLVNQD"
XX
SQ   Sequence 717 BP; 178 A; 190 C; 185 G; 164 T; 0 other;
     atgaatactt tgatccaagg tccagaccat ccatccaacg ccatgtcttc ccgtactaac        60
     aaccgcttta acaacaacag cagatgccca acttgtttcg acgagttgga tgcagtagcg       120
     aggggttgcc ccgctcacgc tcccgcgaac actgtttcgc gacgtcagcg gcgaaacgcc       180
     gctagagctg ccgcgtttag gaacgcgaat gctcgaatga ccgcaccaat tcctgtggtg       240
     ccggtttccc gccctcaagc gaagacatcg ttgaagctac ccaacaatca agtttgggta       300
     actcgcaaag cgagtgaatg gtctgcaaag accattgata ccaacgatgc tatccccttc       360
     aagaccatag tcgaggggat tcccgaaatc aattcggaga cgaagtttta ccgtctccta       420
     attggttttg tcgccgtctc tgatgggacg tttgggatgg ttgatggagt gacgggagat       480
     gtcattccgg acccaccggt cgttggacgg ttgggtttca agaagaatac ctaccgcagc       540
     cgagattttg atctcggcgg taagcttctc aaccaactag acgatagagc tatcgtctgg       600
     tgcctcgacg aaaggcgtcg agatgccaag agggttcagc tggcgggata ttggattgcc       660
     atatccaaac cagctccctt gatgccacca gaagatttcc tggtgaatca agactga          717
//