ID JX294075; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC JX294075; XX DT 24-SEP-2012 (Rel. 114, Created) DT 24-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Papaya leaf curl China virus isolate ageratum segment DNA-A, complete DE sequence. XX KW . XX OS Papaya leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Tang Y.F., He Z.F.; RT "Molecular characterization of begomovirus infecting ageratum in Guangxi, RT China"; RL Unpublished. XX RN [2] RP 1-2754 RA Tang Y.F., He Z.F.; RT ; RL Submitted (10-JUL-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; dc42b6ee4ca28127034e5c897935caf1. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Papaya leaf curl China virus" FT /segment="DNA-A" FT /host="Ageratum conyzoides L." FT /isolate="ageratum" FT /mol_type="genomic DNA" FT /country="China:Guangxi" FT /collected_by="Z.F. He" FT /collection_date="08-Jan-2012" FT /db_xref="taxon:229634" FT gene 128..478 FT /gene="AV2" FT CDS 128..478 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:J9VDB2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:J9VDB2" FT /protein_id="AFR78186.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDL FT ILVIRARDYVEATRRYSHFHTRIQGASPSEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVPDVQKP" FT gene 288..1064 FT /gene="AV1" FT CDS 288..1064 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J9VB53" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J9VB53" FT /protein_id="AFR78185.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRIFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1061..1465) FT /gene="AC3" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:J9V752" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9V752" FT /protein_id="AFR78189.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHDERPFNTNHDI FT ITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACNHVLWDVLEKTEYVTHSHIIKFNLY" FT gene complement(1206..1613) FT /gene="AC2" FT CDS complement(1206..1613) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:J9V9C3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9V9C3" FT /protein_id="AFR78188.1" FT /translation="MRNSSPSTAHCTQVPIKVQHRIAKRRPIRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQARRETIQHQPRHHNDPNTIQPQ FT PEESIGNTPVFSDLPDLDSLTTSDLAFLKSI" FT gene complement(1513..2601) FT /gene="AC1" FT CDS complement(1513..2601) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:J9UVP1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9UVP1" FT /protein_id="AFR78187.1" FT /translation="MPRPKKFLINAKNYFLTYPHCSLTKEEALSQISALSTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINAGSKAAALNILKEKAPKDFVLQFH FT NLNSNLDRIFAPTIEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPL FT YSGTNQSATQNSQEEAHSETES" FT gene complement(2151..2444) FT /gene="AC4" FT CDS complement(2151..2444) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9V7M4" FT /protein_id="AFR78190.1" FT /translation="MGLLTCMSSSSSKANSSAKTTDSSISPPQAGQHISIRTFRELKAQ FT QMLKHTWKKTETSLIMEFSKSMEDQLEEVANLQTTHMPRQSMQGPKQRPSIY" XX SQ Sequence 2754 BP; 729 A; 558 C; 607 G; 860 T; 0 other; accggatggc cgcgattttt tttaaagtgg tccccgcatg cgctcctgtc caatcctatc 60 cgctccttaa agcttaatta ttagttggtc ccctatataa cttggtcccc aagtagtcac 120 gtcaaacatg tgggatcctt tactaaacga gtttcccgag accgtacatg gttttaggtg 180 tatgctagca attaagtatt tgcaactggt agaaaatacg tactctccag atacattagg 240 gcacgattta attcgtgatt taattttagt tattcgtgct agagattatg tcgaagcgac 300 ccgccgatat agtcatttcc acacccgcat ccaaggtgcg tcgccgtctg aatttcgaca 360 gcccgtatgt cagccgtgct gctgccccca ctgtcctcgt cacaaacaaa aggaggtcat 420 gggtgaatcg gcccatgtac cgaaagccca ggatgtaccg gatgtacaaa agccctgatg 480 ttcctcgtgg ttgtgaggga ccatgtaagg tccagtcgta tgaacagcgt catgatgtag 540 ctcacgtagg taaggtcatt tgtgtgtcgg atgttacccg tggtaatggt ttgacgcatc 600 gagtcggtaa gaggttttgc gttaaatctg tctatgtttt gggtaagata tggatggatg 660 agaacattaa gaccaagaat cataccaaca cagtcatgtt ttttctagtt cgtgacagga 720 gaccttttgg cactccccag gattttggcc aggtgtttaa catgtacgat aatgagccga 780 gtacagctac tgtgaagaat gacaacaggg atcgtatttt tcaagttctc cgtcgttttc 840 aggcgactgt tactggtggc cagtatgcaa gtaaggagca agcaatagtc aggaaattca 900 tgaaggtgaa caaccatgtg acttataacc atcaagaggc tgcgaagtat gataaccaca 960 cagagaatgc tttgttattg tatatggcat gtactcatgc tagtaatcca gtgtatgcta 1020 ctttgaagat cagaatctat ttctatgatt ctgttcagaa ttaataaaga ttgaatttta 1080 ttatatgaga atgtgttaca tattctgttt tttctaatac atcccataat acatgattac 1140 atgctctgat tacattgtta atactaatta cacccaaatt atctaaatat ttcatacatt 1200 gaaccctaaa tactcttaag aaacgccaag tctgaggttg taagcgagtc cagatctgga 1260 agatcagaaa acactggtgt attcccaatg ctttcctcag gttgtggttg aattgtattt 1320 ggatcgttat gatgtcgtgg ttggtgttga atggtctctc gtcgtgcttg gttatcttga 1380 aatatagggg atttttgatc gtccaggtat acacgccact ctcgcattga gttgcagtga 1440 gtaattcccc tgtgcgaaaa tccatgattt gcacagtcta tgccgaagta gtacgagcac 1500 ccgcacgtta gatcaactct ccgtctccga atgggcctcc tcttggctat tctgtgttgc 1560 actttgattg gtacctgagt acaatgggct gttgagggtg atgaattccg cattctttaa 1620 tgcccaatct tttaaagctg aatttttatc ctcattcaag tactctttat atgatgatgt 1680 tgggcctgga ttgcaaagga agatagttgg gattccacct ttaatttgaa ttggtttccc 1740 gtacttagtg ttgctttgcc agtccctttg ggcccccatg aattctttaa agtgctttag 1800 atagtgggga tctacgtcat caatgacgtt ataccaagca tcattactgt atatttttgg 1860 gcttagatca agatgtccac acaaataatt gtgtggtccc agtgatctgg cccacattgt 1920 tttacccgta cgactatcac cttctatcac aatactcttg ggtctccacg gccgcgcagc 1980 ggcaccactc acattctcag aaacccactc ttcaagttct tctggaactt gatcgaatga 2040 agaagaaaga aaaggacaaa caaacacctc tatagtaggt gcaaaaatcc tgtctaaatt 2100 actatttaaa ttatgaaact gtaaaacaaa atctttagga gccttctcct ttaatatatt 2160 gagggccgct gctttggacc ctgcattgat tgcctcggca tatgcgtcgt ttgcagattg 2220 gcaacctcct ctagctgatc ttccatcgat ttggaaaact ccatgatcaa ggacgtctcc 2280 gtctttttcc atgtatgctt taacatctgt tgagctttta gctccctgaa tgttcggatg 2340 gaaatgtgct gacctgcttg gggaggtgag atcgaagaat ctgttgtttt ggcacttgaa 2400 tttgccttcg aactggatga ggacatgcag gtgaggagac ccatcttcgt gtagttccct 2460 gcaaatacgt atgaataatt tattagttgg ggttgataag gctgagattt gggaaagtgc 2520 ctcttcttta gtaagggagc agtgtggata agtgaggaaa taattcttgg catttattaa 2580 aaattttttt ggccgaggca tattgactgg tcaatcgggt cctctcaaac ttggctatgc 2640 aatcggggaa tgggtcctta tttatagttc aggacctaaa tggcattatc gtaattccca 2700 aaagaaattc aaaattcgaa tttggaatcg aaaagcggcc atccgtataa tatt 2754 //