Dbfetch
ID JX286655; SV 1; circular; genomic DNA; STD; VRL; 2828 BP. XX AC JX286655; XX DT 27-SEP-2012 (Rel. 114, Created) DT 27-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Sweet potato leaf curl virus isolate XN01 segment DNA-A, complete sequence. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2828 RA Tang Y.F., He Z.F.; RT "Molecular characterization of Sweet potato leaf curl virus in Guangdong, RT China"; RL Unpublished. XX RN [2] RP 1-2828 RA Tang Y.F., He Z.F.; RT ; RL Submitted (06-JUL-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; e3fd90d71584ded92b9df58555673d3b. XX FH Key Location/Qualifiers FH FT source 1..2828 FT /organism="Sweet potato leaf curl virus" FT /segment="DNA-A" FT /host="sweet potato" FT /isolate="XN01" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Z.F. He" FT /collection_date="26-May-2012" FT /db_xref="taxon:100755" FT gene 71..469 FT /gene="AV2" FT CDS 71..469 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:J9YNW8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR007275" FT /db_xref="UniProtKB/TrEMBL:J9YNW8" FT /protein_id="AFS44521.1" FT /translation="MITLLYKDQSGFRPWRPSMAELWDPLQNPLPDTLYGFRCMLSVKY FT LQGILKKYEPGTLGFELCSELIRIFRVRQYDRANARYAEISSVWGETGKTEAELRDSYR FT ALHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 294..1058 FT /gene="AV1" FT CDS 294..1058 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J9YNV1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:J9YNV1" FT /protein_id="AFS44520.1" FT /translation="MTGRMRVTQRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQVFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1074..1508) FT /gene="AC3" FT CDS complement(1074..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:J9YMM7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J9YMM7" FT /protein_id="AFS44524.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSVGRTAPFFLRLMYVHESAQ FT GRTILKFQMRVNYRERRALGFHKIFLQFRISTIRLTGAIHSWTGILERLKWRICNELAN FT LGFFSLINLVFVIRSLPRSCPWIDEVDTIDCNDDVKVLLY" FT gene complement(1225..1671) FT /gene="AC2" FT CDS complement(1225..1671) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:J9YLD7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J9YLD7" FT /protein_id="AFS44523.1" FT /translation="MSNLPSGYKRKCPIQEPSHAEAKKAKRKVPEQRTRIVWKGCGCSA FT FITPTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPQTDVCPRERTGENHP FT QIPNEGQLQGEKSTGIPQDLPAIPDIDDPSNWCYSQLDWYFGTP" FT gene complement(1580..2674) FT /gene="AC1" FT CDS complement(1580..2674) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:J9YLV6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J9YLV6" FT /protein_id="AFS44522.1" FT /translation="MAPPRRFRISSKNYFITYPRCSLSKEDCLSQLLNIQTPTNKKYIH FT IAKELHEDGEPHLHVLVQFEGKFVCTNSRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTLTWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYCSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGGQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQEALKNWALKNAIFCDVQSPF FT WVQEEVSHSGAITRRGEEGQEESS" FT gene complement(2260..2517) FT /gene="AC4" FT CDS complement(2260..2517) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J9YLC3" FT /protein_id="AFS44525.1" FT /translation="MGNLTSMCWCSSKANSSAQIADSSTLFPHQGRLTFTPTSRELNPR FT PMSSPTLTRTEIPSHGVNSRSTADLLEEVSRLLTTQPQRL" XX SQ Sequence 2828 BP; 740 A; 601 C; 684 G; 803 T; 0 other; accggtgccc gccgcgccct ttaaatgtgg gccctacaag gggccacgcg cattttccgt 60 actgtcttta atgattactt tgctttataa ggaccaatca ggtttccgcc cttggcgccc 120 aagtatggct gaattgtggg accctttgca aaacccactg ccagatactt tatacggttt 180 taggtgtatg ctatccgtaa aatacctgca gggtattttg aagaaatacg agccaggaac 240 cctagggttc gagctctgct cggagctcat ccgcatcttc agggtgaggc agtatgacag 300 ggcgaatgcg cgttacgcag agatttcatc cgtatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgat cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttccccaca 540 cgggaacgtt tgtctgtgtc tcggatttta caaggggtac tgggcttacc catcgtctgg 600 gtaagcgtgt ttgtgtgaag tctatgggaa tagatgggaa ggtctggatg gatgacaatg 660 ttgccaagag agaccacacc aatatcatca cgtattggtt gattcgggac agaaggccca 720 ataaggatcc gctgaacttt ggtcaagtat tcactatgta cgacaatgag cccactactg 780 ctaagatccg aatggatctg agggatagaa tgcaggtctt gaagaagttt tctgttacag 840 tttcaggagg tccatattcc cacaaggaac aggctttggt taggaagttt tttaagggtc 900 tgtataacca tgtaacttac aatcacaagg aagaagctaa gtacgagaat catttagaga 960 atgctctcat gctgtatagt gctagtagtc atgctagtaa tcctgtatat cagaccctgc 1020 gttgcagggc ttatttctat gattcgcata ataattaata aaattatatt ttattaatac 1080 agtaatacct tcacatcatc attacaatct attgtgtcta cttcgtcaat ccaaggacat 1140 gatcttggta gactcctaat tacaaaaact aaattaatta aactaaaaaa acctaaattt 1200 gctaattcat tacagatgcg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gacggatcgt cgatatccgg aattgcagga agatcttgtg gaatcccagt 1320 gctcttctct ccctgtaatt gaccctcatt tggaatttga ggatggttct cccctgtgcg 1380 ctctcgtgga catacatcag tctgaggaag aatggtgcag tccgacccac agacatgggg 1440 ttggtgtcga attctagtgc tctcatagtc tgagcacgac ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttggtgt tatgaaggct gaacagccgc agcccttcca 1560 cactatcctc gtcctttgtt caggaacttt cctcttggcc ttcttcgcct ctgcgtgtga 1620 tggctcctga atgggacact tcctcttgta cccagaaggg agattggaca tcgcagaata 1680 ttgcgttctt taatgcccaa ttcttgagtg cttcttgctc tggtttgtcc aaccagagtt 1740 taaatgagga tccctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagttggatt gccagtcctt ctggcccccc atgaattcct 1860 taaagtgctt taagtattga ggattgacgt catcaatgac gttataccaa gcactgttgc 1920 tgtacacttt aggacttaga tctaaatgcc cacacaaata attgtgaggg cccaaagacc 1980 tggcccatac tgttttgcct attctgcttg ggccttcaat aacaatggat atgggtctat 2040 ctggccgcgc agcggaatcc atgacatttt cagcggccca gtcgctgata atgtcaggaa 2100 cggcattgaa agaagaagaa gaaaaaggag aacaatatac ggaaggtgga ggagaaaaaa 2160 tcctatctaa atttgaaact aaattatgat attgaaataa atatttttca gggagtttct 2220 ccctgattat ttgcaacgca gcttctttag aacctgcgtt tagagcctct gcggctgcgt 2280 cgttagcagt ctgctgacct cctctagcag atctgccgtc gacctggaat tcaccccatg 2340 tgagggtatc tccgtccttg tcaacgtagg acttgacatc ggacgaggat ttagctccct 2400 ggatgttggg gtgaaagtga gccgaccttg atggggaaac aaggtcgaag aatctgctat 2460 ttgtgcagac gaatttgcct tcgaactgca ccagcacatg gaggtgaggt tccccatcct 2520 cgtgcagttc tttggcgatg tgtatgtatt ttttgtttgt aggggtttgg atgttaagaa 2580 gttgggatag gcagtcctct ttagagagag aacagcgtgg gtaagtaata aaatagtttt 2640 ttgaagaaat tctaaaacgt ctaggcggag ccatttggtg acactcagac ttccaaatga 2700 attggtgact ggtgacaatt tatagtatgt caccaaatgg cattatggta atttagaaga 2760 tccttttagc tttaattcaa attccgacaa atctgggtcc accaaaaggc gggcaccgta 2820 ttaatatt 2828 //