ID   JX259429; SV 1; circular; genomic RNA; STD; VRL; 294 BP.
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AC   JX259429;
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DT   16-SEP-2012 (Rel. 114, Created)
DT   31-MAY-2016 (Rel. 129, Last updated, Version 2)
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DE   Citrus dwarfing viroid isolate 15-1.14-CDVd, complete sequence.
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KW   .
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OS   Citrus dwarfing viroid
OC   Viruses; Riboviria; Pospiviroidae; Apscaviroid.
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RN   [1]
RP   1-294
RX   DOI; 10.1007/s10658-013-0231-6.
RX   AGRICOLA; IND500683651.
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T.L., Kyriakopoulou P.E., Vidalakis G.;
RT   "Identification and characterization of known and novel viroid variants in
RT   the Greek national citrus germplasm collection: threats to the industry";
RL   Eur. J. Plant Pathol. 137(1):17-27(2013).
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RN   [2]
RP   1-294
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T., Kyriakopoulou P.E., Vidalakis G.;
RT   ;
RL   Submitted (25-JUN-2012) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, Riverside, 900
RL   University Ave., Riverside, CA 92521, USA
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DR   MD5; 7894d92e8332136bcc6c25053ba72e93.
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FH   Key             Location/Qualifiers
FH
FT   source          1..294
FT                   /organism="Citrus dwarfing viroid"
FT                   /host="Citrus sinensis (Navelina navel orange)"
FT                   /isolate="15-1.14-CDVd"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece:Poros Arboricultural Station"
FT                   /PCR_primers="fwd_name: CDVd-For87-107, fwd_seq:
FT                   ctgtcgacgaaggcagctaagtt, rev_name: CDVd-Rev92-70, rev_seq:
FT                   cagtcgacgacgacaggtaagtttc"
FT                   /PCR_primers="fwd_name: CDVd-For264-287, fwd_seq:
FT                   ctccagggtaaaacacgattggtg, rev_name: CDVd-Rev270-253,
FT                   rev_seq: cctggaggcccaatyycc"
FT                   /note="possible recombinant"
FT                   /db_xref="taxon:551523"
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SQ   Sequence 294 BP; 73 A; 75 C; 86 G; 60 T; 0 other;
     ggaggaaact ccgtgtggtt cctgtggggc acaccccctt gccgaaaata aaacgcagag        60
     agggaaaagg aaacttacct gtcgtcgtcg acgaaggcag ctaagttggt gaagccgagt       120
     ggagtaaaga cggagagtct ccgctagtcg gaaagactcc gcatcctccg gcagaccctc       180
     cttgctcgcc gctagtcgag cggacttcag gagagtagcc ccaatcctaa tctgttttta       240
     tctaggctag aaggggattg ggcctccagg gtaaaacacg attggtgttt cccc             294
//