ID   JX259410; SV 1; circular; genomic RNA; STD; VRL; 299 BP.
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AC   JX259410;
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DT   16-SEP-2012 (Rel. 114, Created)
DT   31-MAY-2016 (Rel. 129, Last updated, Version 2)
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DE   Hop stunt viroid isolate 13-1.27-HSVd, complete sequence.
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KW   .
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OS   Hop stunt viroid
OC   Viruses; Riboviria; Pospiviroidae; Hostuviroid.
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RN   [1]
RP   1-299
RX   DOI; 10.1007/s10658-013-0231-6.
RX   AGRICOLA; IND500683651.
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T.L., Kyriakopoulou P.E., Vidalakis G.;
RT   "Identification and characterization of known and novel viroid variants in
RT   the Greek national citrus germplasm collection: threats to the industry";
RL   Eur. J. Plant Pathol. 137(1):17-27(2013).
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RN   [2]
RP   1-299
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T., Kyriakopoulou P.E., Vidalakis G.;
RT   ;
RL   Submitted (25-JUN-2012) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, Riverside, 900
RL   University Ave., Riverside, CA 92521, USA
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DR   MD5; e20bee7c86d2250143b8b43fcdcbdba7.
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FH   Key             Location/Qualifiers
FH
FT   source          1..299
FT                   /organism="Hop stunt viroid"
FT                   /host="Citrus sinensis (Lane Late navel orange)"
FT                   /isolate="13-1.27-HSVd"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece:Poros Arboricultural Station"
FT                   /PCR_primers="fwd_name: HSVd-For78-102, fwd_seq:
FT                   cgcccggggcaactcttctcagaatcc, rev_name: HSVd-Rev85-60,
FT                   rev_seq: gccccggggctcctttctcaggtaag"
FT                   /PCR_primers="fwd_name: HSVd-For283-302, fwd_seq:
FT                   ccggatcctctcttgagcccct, rev_name: HSVd-Rev288-271, rev_seq:
FT                   ctggatccgcggcagaggct"
FT                   /note="CV-IIa"
FT                   /db_xref="taxon:12893"
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SQ   Sequence 299 BP; 60 A; 85 C; 83 G; 71 T; 0 other;
     ctggggaatt ctcgagttgc tgcatgggca agcaaagaaa aaacaaggca gggaggagac        60
     ttacctgaga aaggagcccc ggggcaactc ttctcagaat ccagcgagag gcgtggagag       120
     agggccgcgg tgctctggag tagaggcttc tgcttcgaaa caccatcgat cgtcccttct       180
     tctttacctt ctcctggctc ttcgagtgag acgcgaccgg tggcatcacc tctcggttcg       240
     tcttccaacc tgctttttgt ctatctgagc ctctgccgcg gatcctctct tgagcccct        299
//