ID   JX259397; SV 1; circular; genomic RNA; STD; VRL; 301 BP.
XX
AC   JX259397;
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DT   16-SEP-2012 (Rel. 114, Created)
DT   31-MAY-2016 (Rel. 129, Last updated, Version 2)
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DE   Hop stunt viroid isolate 06-1.5-HSVd, complete sequence.
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KW   .
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OS   Hop stunt viroid
OC   Viruses; Riboviria; Pospiviroidae; Hostuviroid.
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RN   [1]
RP   1-301
RX   DOI; 10.1007/s10658-013-0231-6.
RX   AGRICOLA; IND500683651.
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T.L., Kyriakopoulou P.E., Vidalakis G.;
RT   "Identification and characterization of known and novel viroid variants in
RT   the Greek national citrus germplasm collection: threats to the industry";
RL   Eur. J. Plant Pathol. 137(1):17-27(2013).
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RN   [2]
RP   1-301
RA   Wang J., Boubourakas I.N., Voloudakis A.E., Agorastou T., Magripis G.,
RA   Rucker T., Kyriakopoulou P.E., Vidalakis G.;
RT   ;
RL   Submitted (25-JUN-2012) to the INSDC.
RL   Plant Pathology and Microbiology, University of California, Riverside, 900
RL   University Ave., Riverside, CA 92521, USA
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DR   MD5; 0c18e4b3e210890ffb420693fb76ff54.
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FH   Key             Location/Qualifiers
FH
FT   source          1..301
FT                   /organism="Hop stunt viroid"
FT                   /host="Citrus reticulata (Page mandarin)"
FT                   /isolate="06-1.5-HSVd"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece:Poros Arboricultural Station"
FT                   /PCR_primers="fwd_name: HSVd-For78-102, fwd_seq:
FT                   cgcccggggcaactcttctcagaatcc, rev_name: HSVd-Rev85-60,
FT                   rev_seq: gccccggggctcctttctcaggtaag"
FT                   /PCR_primers="fwd_name: HSVd-For283-302, fwd_seq:
FT                   ccggatcctctcttgagcccct, rev_name: HSVd-Rev288-271, rev_seq:
FT                   ctggatccgcggcagaggct"
FT                   /note="CV-IIa"
FT                   /db_xref="taxon:12893"
XX
SQ   Sequence 301 BP; 61 A; 86 C; 82 G; 72 T; 0 other;
     ctggggaatt ctcgagttgc cgcatgggca agcaaagaaa aaacaaggca gggaggagac        60
     ttacctgaga aaggagcccc ggggcaactc ttctcagaat ccagcgagag gcgtaggaga       120
     gagggccgcg gtgctctgga gtaaggcttc ttgcttcgaa acaccatcga tcgtcccttc       180
     ttcttttacc ttctcctggc tcttcgagtg agacgcgacc ggtggcatca cctctcggtt       240
     cgtcttccaa cctgcttttt gtctatctga gcctctgccg cggatcctct cttgagcccc       300
     t                                                                       301
//