ID   JX256249; SV 1; linear; genomic RNA; STD; VRL; 2289 BP.
XX
AC   JX256249;
XX
DT   16-SEP-2012 (Rel. 114, Created)
DT   16-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Citrus leaf rugose virus isolate ATCC PV 195 segment RNA3, complete
DE   sequence.
XX
KW   .
XX
OS   Citrus leaf rugose virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2289
RA   Hajeri S., Gowda S., Garnsey S.M.;
RT   "Complete nucleotide sequence of Citrus leaf rugose virus (CiLRV) Florida
RT   isolate";
RL   Unpublished.
XX
RN   [2]
RP   1-2289
RA   Hajeri S., Gowda S., Garnsey S.M.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Plant Pathology, Citrus Research & Education Center, Institute of Food &
RL   Agricultural Sciences, University of Florida, 700 Experiment Station Road,
RL   Lake Alfred, FL 33850, USA
XX
DR   MD5; 7d8d49e0a56380283229db6c6ef9c918.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2289
FT                   /organism="Citrus leaf rugose virus"
FT                   /segment="RNA3"
FT                   /host="Citrus limon L. (Eureka lemon)"
FT                   /isolate="ATCC PV 195"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Florida"
FT                   /collected_by="Subhas Hajeri"
FT                   /collection_date="02-May-2011"
FT                   /db_xref="taxon:37126"
FT   5'UTR           1..358
FT   CDS             359..1213
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:J9S7D9"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:J9S7D9"
FT                   /protein_id="AFR46585.1"
FT                   /translation="MALSSFKAISVEHKDFLSLMNEVCGVMREHVADSSTSGLSAKEAL
FT                   IKANSAWELVSKDFSVLATKWNKMVKKMINVSHRNIYLIYIPRILSDTACTDRCMLINA
FT                   ATMEKKPVGLLPMNKMFILKTGWPRSLRVKDILAHKGLFLTHSFIAPTLPPDCSVGRWI
FT                   PFWEEDFGLPMVYQKDVTADMAIRNEESVRDAISNDVAASLMNSLLERTMNAQRRAIDV
FT                   GLVSSGEEQMMPDFTTETVKVTKDRIDAANTDNTFGKVISGDGRYEDLSTASKGRGQNT
FT                   PTP"
FT   misc_feature    1214..1330
FT                   /note="intergenic region"
FT   CDS             1331..1984
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:J9S4M8"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:J9S4M8"
FT                   /protein_id="AFR46586.1"
FT                   /translation="MANRSNAIEVNGVWYSRADSAPVANARGRRRPTNRSRNWAQGQRS
FT                   QPQRMVVGSMPIDTITWKSFPGEQWHEVSGFSFPDAWGSGKIAYASMRTELGKIKSLHH
FT                   TTKVYSVMYGFTCKADGYAGFMDNFDSANATGPVAPNRIRVKAGKYCARQLVLPPGSTV
FT                   ADLRDNYNFVWEFDAAPAAGTANIISVTKFYVSTVPLPGIKPPPNFLVCEMDDK"
FT   3'UTR           1985..2289
XX
SQ   Sequence 2289 BP; 583 A; 496 C; 560 G; 650 T; 0 other;
     gtattcatct gagcataaat accctttgag aacgaaagac catctgtcaa ccaagcaagt        60
     tgtccattcc gaaatttcta ataggcgtca gaatttcgat tcccactacc tacttaactg       120
     tggattcagt ggaagtttcg cttgtggaca gcttctgaga acagtttaac gagtggaggc       180
     tcgggttttt ctgatcttag aaagtgcatt cagcgtgttt tatccgctgt gcaacattgg       240
     aatacttcct cgtctagtac gggatagccc tcattttcaa gtgttacctc tgcacttagg       300
     gttctgttga ggtgtactcg ttcgagaaga gcttttaaaa tcgcaaaagc tatttatcat       360
     ggcactttcc agtttcaagg caatctctgt cgaacataaa gatttcttgt ctctgatgaa       420
     tgaggtttgt ggtgtgatgc gagagcacgt cgcggattcc tccacttccg ggttgtcagc       480
     caaggaagcg ctaatcaagg caaattccgc ttgggagtta gtctcaaaag acttctccgt       540
     tttagcgacg aagtggaata agatggtgaa gaagatgatt aatgtttctc atagaaacat       600
     ttatctaata tatattccac gaatacttag tgacacagca tgcacggaca ggtgcatgtt       660
     gattaatgca gcgacaatgg agaagaaacc ggtcggatta ctacccatga ataaaatgtt       720
     tattttaaaa actgggtggc ctcgttcatt gagggtgaag gatattttag cccataaagg       780
     cttgttttta actcattcct tcatagcgcc gactttacct cccgattgtt ccgttgggag       840
     atggattccc ttctgggaag aagactttgg tttaccaatg gtctaccaga aggatgttac       900
     cgcagatatg gcgattcgta atgaggagtc agtccgtgat gccatttcta atgatgtagc       960
     tgcttcattg atgaactccc tgttagagag aacaatgaat gcacagcgac gtgccataga      1020
     cgtaggcctc gtttcatctg gtgaggaaca gatgatgcct gattttacca cagaaactgt      1080
     gaaggttacc aaagatcgta ttgatgctgc taatactgat aacacatttg gtaaagtgat      1140
     tagtggtgat ggtaggtatg aggatctgtc aaccgcttca aaggggcgtg gacagaatac      1200
     cccgactccg tgatgtatat gcgttgtggg atggataccc ttatttgggt cccccagacg      1260
     cgcgttgcgt gggggttcat gtcttgagaa gccttttcct ctactaagcg ttccatccaa      1320
     ccactgatcc atggcaaata gaagcaatgc tatcgaagtc aacggtgtgt ggtacagccg      1380
     agccgatagt gcccccgtag caaacgcacg gggacgccgc cgacctacaa atagatcgcg      1440
     caattgggcg caaggtcagc gaagtcaacc tcagcgtatg gtcgtgggtt ctatgcccat      1500
     tgacacaatc acctggaagt cttttccagg tgagcagtgg catgaggttt ccgggttttc      1560
     ttttcccgat gcttggggta gtggcaaaat cgcctacgcc tcaatgagaa ctgagttggg      1620
     gaagattaaa tccctccacc atactacgaa ggtttattcc gtaatgtatg gatttacttg      1680
     caaagccgat ggttatgccg gctttatgga taatttcgac agtgccaatg ccacaggtcc      1740
     agttgctcct aaccggatcc gagtgaaggc gggcaaatat tgcgcgcgcc agttggtctt      1800
     acctccagga tcgactgttg ccgacctacg cgacaactac aacttcgtgt gggaattcga      1860
     tgcggcacca gctgccggca ctgcgaatat tatttccgtg acaaaatttt atgtgtctac      1920
     ggtgcctcta cctggtatta agcctccgcc taatttcctg gtatgtgaga tggatgataa      1980
     atgaccacaa gaatgtgaat cttgtggtta tattccatac tgccactgtg aatgttggcc      2040
     gtacagatgc tacaccattg ggtgtaatgc taatgatcta tggtttatag attcttaaag      2100
     tctcactttc gtgagctgat gaagggccct ccggggtgtg ctcagcactt aacctaagtc      2160
     aagttcatat gcccaccttt gctgctccgg gtggatgctt cgtgcaaatg ctatgaatgc      2220
     ctacgtatat gtgcgtagat gcctatattt tctctcctga gaaaatatag atgcctccca      2280
     aggagatgc                                                              2289
//