ID   JX244197; SV 1; linear; genomic RNA; STD; VRL; 1408 BP.
XX
AC   JX244197;
XX
DT   16-SEP-2012 (Rel. 114, Created)
DT   16-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato chlorotic spot virus isolate T18-H nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato chlorotic spot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1408
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   "First record of Tomato chlorotic spot virus in the USA";
RL   Trop Plant Pathol 37:0(2012).
XX
RN   [2]
RP   1-1408
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Plant Pathology, University of Florida, 1453 Fifield Hall Hull Rd,
RL   Gainesville, FL 32611, USA
XX
DR   MD5; 94f5cdb533b02f6630fcf33f2a43149b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1408
FT                   /organism="Tomato chlorotic spot virus"
FT                   /segment="S"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="T18-H"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="May-2012"
FT                   /db_xref="taxon:12851"
FT   gene            complement(472..1248)
FT                   /gene="N"
FT   CDS             complement(472..1248)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:J9SQJ8"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:J9SQJ8"
FT                   /protein_id="AFR53116.1"
FT                   /translation="MSKVKLTKENIISLLTQAGEIEFEEDQNQAAFNFKTFCGENLDSI
FT                   KKMSITSCLTFLKNRQSIMKVVNQSDFTFGKITIKKNSGRVGANDMTFRRLDSMIRVKL
FT                   IEETGKAENLAIIKSKIASHPLVQAYGLPLTDAKSVRLAIMLGGSIPLIASVDSFEMIS
FT                   IILAIYQDAKYKDLGIEPSKYNTKEALGKVCTVLKSKGFTMDEAQIQKGKEYVTILSSC
FT                   NPNAKGSIAMEHYSEHLDKFYAMFGVRKEAKISGVA"
XX
SQ   Sequence 1408 BP; 401 A; 251 C; 204 G; 552 T; 0 other;
     actggatcct tttgtttttg ttttttgtta tttttattta tttttattta acacacacaa        60
     tccacacaaa caattagtat ttaattttta tttatttcaa tttgttttgt ttttatttag       120
     tttttattca acacacacaa tccacacata taatttttat ttaattttta tttaatttta       180
     tttaatttta cttaattttt atttatttta atttgttttg tttttatttt agtttttatt       240
     taacacacac aatccacaca tataattttt atttaatttt tattttattt tacttaattt       300
     tagttaattt ttatttaatg aaatctaaca cacttaatct gaacttaaca cactttaaca       360
     cacttagcta aatttgacac acttaactga acattaacac acttagtatt atgcatctat       420
     agattagcac atttaataac atgcatctct taaatagatt ttaagaagct cttatgcaac       480
     acctgaaatt ttggcttctt tccttactcc gaacattgca tagaatttgt caagatgctc       540
     actgtaatgt tccatagcaa tgcttccttt agcattggga ttgcaagagc tgagtattgt       600
     tacatattct ttccctttct gtatttgtgc ttcatccatt gtaaatcctt tactttttaa       660
     cacagtgcag acctttccta aagcttcttt agtgttatac ttcgaaggct caattccaag       720
     atctttatat ttagcatctt ggtatatggc aaggatgatg ctgatcattt caaagctgtc       780
     cacagaagca atcagaggga tactacctcc tagcattatg gcaagcctca cagactttgc       840
     atctgtcaga ggcagaccat aagcttgaac aagaggatga gaggcaatct tagacttgat       900
     aatagcaagg ttttctgctt tcccagtttc ttcaatcagc ttaactctta tcatactatc       960
     aagccttctg aaagtcatat cgttagctcc aacccttcca gaattctttt tgattgtgat      1020
     tttcccaaag gtaaaatcac tttggttcac aactttcatg atgctctggc gatttttcag      1080
     gaaagtcaaa catgaggtaa tgctcatttt cttgattgaa tcaagatttt ctccgcaaaa      1140
     agtcttgaag ttgaatgcag cttgattttg atcttcttca aactcgattt ctccagcctg      1200
     agttagaaga gagataatgt tctctttggt gagcttgacc ttagacattt tggcagtgta      1260
     gatctagacc gctctcgaga gatgtgattc aaggtaagaa agtacgactc tgtagaccgc      1320
     agtcgctact tatcctggca atgtgatgat ttgtgttgct gagtagtatg tttttgaata      1380
     aaattgacac aattgctctg gatccggg                                         1408
//