ID   JX244196; SV 1; linear; genomic RNA; STD; VRL; 1454 BP.
XX
AC   JX244196;
XX
DT   16-SEP-2012 (Rel. 114, Created)
DT   16-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato chlorotic spot virus isolate T11-MD nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato chlorotic spot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1454
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   "First record of Tomato chlorotic spot virus in the USA";
RL   Trop Plant Pathol 37:0(2012).
XX
RN   [2]
RP   1-1454
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Plant Pathology, University of Florida, 1453 Fifield Hall Hull Rd,
RL   Gainesville, FL 32611, USA
XX
DR   MD5; 1a087cc60ba2715f09fd007e19edcc12.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1454
FT                   /organism="Tomato chlorotic spot virus"
FT                   /segment="S"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="T11-MD"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Apr-2012"
FT                   /db_xref="taxon:12851"
FT   gene            complement(518..1294)
FT                   /gene="N"
FT   CDS             complement(518..1294)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:J9SW37"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:J9SW37"
FT                   /protein_id="AFR53115.1"
FT                   /translation="MSKVKLTKENIISLLTQAGEIEFEEDQNQAAFNFKTFCGENLDSI
FT                   KKMSITSCLTFLKNRQSIMKVVNQSDFTFGKITIKKNSGRVGANDMTFRRLDSMIRVKL
FT                   IEETGKAENLAIIKSKIASHPLVQAYGLPLTDAKSVRLAIMLGGSIPLIASVDSFEMIS
FT                   IILAIYQDAKYKDLGIEPSKYNTKEALGKVCTVLKSKGFTMDEAQIQKGKEYATILSSC
FT                   NPNAKGSIAMEHYSEHLDKFYAMFGVRKEAKISGVA"
XX
SQ   Sequence 1454 BP; 408 A; 251 C; 210 G; 585 T; 0 other;
     actggatcct tttgtttttg ttttttgttt ttatagtttt ttgttgtttt ttgtttttat        60
     atatagtttt ttgttatttt tatttatttt tatttaacac acacaatcca cacaaacaat       120
     tagtatttaa tttttattta tttcaatttg ttttgttttt atttagtttt tattcaacac       180
     acacaatcca cacatataat ttttatttaa tttttattta attttattta attttactta       240
     atttttattt attttaattt gttttgtttt tattttagtt tttatttaac acacacaatc       300
     cacacatata atttttattt aatttttatt ttattttact taattttagt taatttttat       360
     ttaatgaaat ctaacacact taatctgaac ttaacacact ttaacacact tagctaaatt       420
     tgacacactt aactgaacat taacacactt agtattatgc atctatagat tagcacattt       480
     aataacatgc atctcttaaa tagattttaa gaagctctta tgcaacacct gaaattttgg       540
     cttctttcct tactccgaac attgcataga atttgtcaag atgctcactg taatgttcca       600
     tagcaatgct tcctttagca ttgggattgc aagagctgag tattgtagca tattctttcc       660
     ctttctgtat ctgtgcttca tccattgtaa atcctttact ttttaacaca gtgcagacct       720
     ttcctaaagc ttctttagtg ttatactttg aaggctcaat tccaagatct ttatatttag       780
     catcttggta tatggcaagg atgatgctga tcatttcaaa gctgtccaca gaagcaatca       840
     gagggatact acctcctagc attatggcaa gcctcacaga ctttgcatct gtcagaggca       900
     gaccataagc ttgaacaaga ggatgagagg caatcttaga cttgataata gcaaggtttt       960
     ctgctttccc agtttcttca atcagcttaa ctcttatcat actatcaagc cttctgaaag      1020
     tcatatcatt agctccaacc cttccagaat tctttttgat tgtgattttc ccaaaggtaa      1080
     aatcactttg gttcacaact ttcatgatgc tctggcgatt tttcaggaaa gtcaaacatg      1140
     aggtaatgct cattttcttg attgaatcaa gattttctcc gcaaaaagtc ttgaagttga      1200
     atgcagcttg attttgatct tcttcaaact cgatttctcc agcctgagtt agaagagaga      1260
     taatgttctc tttggtgagc ttgaccttag acattttggc agtgtagatc tagaccgctc      1320
     tcgagagatg tgattcaagg taagaaagta cgactctgta gaccgcagtc gctacttatc      1380
     ctggcaatgt gatgatttgt gttgctgagt agtatgtttt tgaataaaat tgacacaatt      1440
     gctctggatc cggg                                                        1454
//