ID   JX244195; SV 1; linear; genomic RNA; STD; VRL; 1428 BP.
XX
AC   JX244195;
XX
DT   16-SEP-2012 (Rel. 114, Created)
DT   16-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato chlorotic spot virus isolate T9-MD nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato chlorotic spot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1428
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   "First record of Tomato chlorotic spot virus in the USA";
RL   Trop Plant Pathol 37:0(2012).
XX
RN   [2]
RP   1-1428
RA   Londono A., Capobianco H., Zhang S., Polston J.E.;
RT   ;
RL   Submitted (27-JUN-2012) to the INSDC.
RL   Plant Pathology, University of Florida, 1453 Fifield Hall Hull Rd,
RL   Gainesville, FL 32611, USA
XX
DR   MD5; de9c233efb2daef72564b0bb5a33e7de.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1428
FT                   /organism="Tomato chlorotic spot virus"
FT                   /segment="S"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="T9-MD"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Apr-2012"
FT                   /db_xref="taxon:12851"
FT   gene            complement(492..1268)
FT                   /gene="N"
FT   CDS             complement(492..1268)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:J9SYC1"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:J9SYC1"
FT                   /protein_id="AFR53114.1"
FT                   /translation="MSKVKLTKENIISLLTQAGEIEFEEDQNQAAFNFKTFCGENLDSI
FT                   KKMSITSCLTFLKNRQSIMKVVNQSDFTFGKITIKKNSGRVGANDMTFRRLDSMIRVKL
FT                   IEETGKAENLAIIKSKIASHPLVQAYGLPLTDAKSVRLAIMLGGSIPLIASVDSFEMIS
FT                   IILAIYQDAKYKDLGIELSKYNTKEALGKVCTVLKSKGFTMDEAQIQKGKEYATILSSC
FT                   NPNAKGSIAMEHYSEHLDKFYAMFGVRKEAKISGVA"
XX
SQ   Sequence 1428 BP; 406 A; 251 C; 206 G; 565 T; 0 other;
     actggatcct tttgtttttg ttttttgttt ttatatatag ttttttgtta tttttattta        60
     tttttattta acacacacaa tccacacaaa caattagtat ttaattttta tttatttcaa       120
     tttgttttgt ttttatttag tttttattca acacacacaa tccacacata taatttttat       180
     ttaattttta tttaatttta tttaatttta cttaattttt atttatttta atttgttttg       240
     tttttatttt agtttttatt taacacacac aatctacaca tataattttt atttaatttt       300
     tattttattt tacttaattt tagttaattt ttatttaatg aaatctaaca cacttaatct       360
     gaacttaaca cactttaaca cacttagcta aatttgacac acttaactga acattaacac       420
     acttagtatt atgcatctat agattagcac atttaataac atgcatctct taaatagatt       480
     ttaagaagct cttatgcaac acctgagatt ttggcttctt tccttactcc gaacattgca       540
     tagaatttgt caagatgctc actgtaatgt tccatagcaa tgcttccttt agcattggga       600
     ttgcaagagc tgagtattgt agcatattct ttccctttct gtatttgtgc ttcatccatt       660
     gtaaatcctt tactttttaa cacagtgcag acctttccta aagcttcttt agtgttatac       720
     ttcgaaagct caattccaag atctttatat ttagcatctt ggtatatggc aaggatgatg       780
     ctgatcattt caaagctgtc cacagaagca atcagaggga tactacctcc tagcattatg       840
     gcaagcctca cagactttgc atctgtcaga ggcagaccat aagcttgaac aagaggatga       900
     gaggcaatct tagacttgat aatagcaagg ttttctgctt tcccagtttc ttcaatcagc       960
     ttaactctta tcatactatc aagcctcctg aaagtcatat cattagctcc aacccttcca      1020
     gaattctttt tgattgtgat tttcccaaag gtaaaatcac tttggttcac aactttcatg      1080
     atgctctggc gatttttcag gaaagtcaaa catgaggtaa tgctcatttt cttgattgaa      1140
     tcaagatttt ctccgcaaaa agtcttgaag ttgaatgcag cttgattttg atcttcttca      1200
     aactcgattt ctccagcctg agttagaaga gagataatgt tctctttggt gagcttgacc      1260
     ttagacattt tggcagtgta gatctagacc gctctcgaga gatgtgattc aaggtaagaa      1320
     agtacgactc tgtagaccgc agtcgctact tatcctggca atgtgatgat ttgtgttgct      1380
     gagtagtatg tttttgaata aaattgacac aattgctctg gatccggg                   1428
//