ID JX237459; SV 1; linear; genomic RNA; STD; VRL; 3404 BP. XX AC JX237459; XX DT 19-SEP-2012 (Rel. 114, Created) DT 19-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Citrus leaf rugose virus strain ATCC PV-195 replicase protein 1a gene, DE complete cds. XX KW . XX OS Citrus leaf rugose virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-3404 RA Garnsey S.M.; RT "Purification and Properties of Citrus-Leaf-Rugose Virus"; RL Phytopathology 65:50-57(1974). XX RN [2] RP 1-3404 RA Hajeri S., Gowda S., Garnsey S.M.; RT "Complete nucleotide sequence of Citrus leaf rugose virus (CiLRV) Florida RT isolate"; RL Unpublished. XX RN [3] RP 1-3404 RA Hajeri S., Gowda S., Garnsey S.M.; RT ; RL Submitted (27-JUN-2012) to the INSDC. RL Plant Pathology, Citrus Research & Education Center, Institute of Food & RL Agricultural Sciences, University of Florida, 700 Experiment Station Road, RL Lake Alfred, FL 33850, USA XX DR MD5; 1e2688f47e7d329ea64c2d0bf49a5b41. XX FH Key Location/Qualifiers FH FT source 1..3404 FT /organism="Citrus leaf rugose virus" FT /strain="ATCC PV-195" FT /mol_type="genomic RNA" FT /country="USA:Florida" FT /db_xref="taxon:37126" FT /culture_collection="ATCC:PV-195" FT 5'UTR 1..73 FT CDS 74..3229 FT /codon_start=1 FT /product="replicase protein 1a" FT /db_xref="GOA:J9UF50" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:J9UF50" FT /protein_id="AFR69344.1" FT /translation="MDSFVASPSNVLRLDDILNDVVRRNAANASTDVGRLISDAAVNVV FT RRQVDLSPAKPLNVSFALTPEDQNSLRRDFPGRELQFRNSASSSHAYAAAHRVCETDYI FT YSRFQTENTTIIDIGGNFSTHAKMGRSNVHSCCPILDVRDGARYTDRFMSIAGALEKQP FT DRELNLNYCDHKFEDCDVKAPWAMAIHSISDIPITTVVKHCFRRGVKKLIASIMDGSND FT VNRHRSFIPRLNVRWEVETIDKERKISFHFVDAPGLSYTHNFDVLMQYMTCNQVIVTGK FT AAYRVERVADLSGVFIVEITLASTNSHRLDLIPMRDVSCAWLSSLRRKTLVRVAIPQLK FT NSWEIKHVIMDTDFVRRVAEVSFRQYKPDTPLENLVQSVATMISSASNHCVINGVTMQT FT GSPVMIDYYVPLAVTFVAFARSRYRMIKPGMEMVRQRGVSIVDPNADVDFVNVKGEAIA FT TKSMVKTAIRGLLFPTRTKVDDNTVLLYTCPILESIVDEIKTALGWDCWATDDAVIQSL FT PSFYKMEDVFEVTSDHFCLSHTLNVDYWLEGLYDSYDELRQAHKIRLAQEEARKTKVEN FT ALLKIAEVLESDTCPSGLLPLKLEPLVSSLIEKKTDEIITKPQCSDASKPHINPHADAI FT KEAISYYNELEVVATRNLRGVGDYLFWRQKSNYASVWGADDSRCVLEPLSRRWFNRQNR FT TEYERGMSVDGFVRLAWKDGDLTPDTWASISKYNVLLFDSTCVFDARSRLLPGLNKALV FT MDCKASVIIEDGVAGCGKTTSLLKQAKIESDMLLSANRETARDARESGAIPDVLKYRVR FT TLDSYLMLKKWFTADRLLVDECFLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPT FT FSLKHPSIRGKLKPKTITYRCPRDATAVLSEKFYKTNVKTFNPTSSSLSLIDISSSMEI FT PAEKDTLYIMHTQADKCAMLRHPGINPDNVMTTHEAQGKTFNHVILVRLSKTTNLLYSG FT KMPDAGPSHNLVGLSRHKSTLRYYSVYADDPDDMIATGIRWSKTLDEQALARYRAGDLV FT SLS" FT 3'UTR 3230..3404 XX SQ Sequence 3404 BP; 927 A; 673 C; 790 G; 1014 T; 0 other; gtattgtgaa acgttatttc gttcacgacc cggattaatc agttattctg agtatatacc 60 cgttagttgc tcaatggatt catttgttgc ttcgccttca aatgtgcttc gtttagatga 120 tatcttaaat gatgttgtca gacgaaatgc cgctaatgcc tctaccgatg ttggtagatt 180 aattagcgat gccgccgtta acgtggttcg ccgacaggtg gatctcagtc cggccaagcc 240 cttaaacgtt tcgttcgcgt tgactcctga agatcagaat agtttaagga gagattttcc 300 aggtagggaa ttacaatttc gtaattctgc ttcctcttca cacgcatacg ctgctgcgca 360 tcgtgtatgc gagactgatt atatttactc cagatttcag accgagaata cgacaattat 420 tgatattgga ggtaatttca gtactcatgc caaaatgggt aggagtaatg ttcattcctg 480 ttgtccaatt ttggatgtcc gcgatggtgc gcggtatacc gacaggttta tgtcaattgc 540 cggtgcgctt gaaaaacaac ccgataggga gttaaatttg aattattgtg accataaatt 600 tgaagattgt gatgtcaagg cgccttgggc catggcaatt cactcaattt ccgatattcc 660 catcacgaca gtggtcaaac attgttttcg tagaggagtt aagaaattga tcgcttcaat 720 tatggatgga tccaatgatg ttaatcgcca ccgaagtttt attcctcgtc tcaatgttag 780 atgggaagtt gaaactattg ataaggagag gaaaatttct ttccattttg tcgatgctcc 840 tggtttgtca tacactcaca attttgatgt tttgatgcag tatatgactt gcaatcaagt 900 tattgttacc gggaaagccg cgtacagagt tgagcgcgta gctgacttga gtggagtgtt 960 tatcgttgaa ataacactcg catccactaa tagtcataga ttggatttga ttcccatgcg 1020 agatgtttct tgtgcatggt tgagttcatt gcgacgaaag actcttgtta gagtggccat 1080 tccgcagttg aaaaattctt gggagataaa acatgtgatt atggacacag atttcgtcag 1140 acgtgttgcc gaagtttcat tccggcaata caagcccgat acacccttgg agaacctagt 1200 tcagagcgtt gctactatga tttcatcagc atcgaatcac tgcgttatta atggtgttac 1260 gatgcaaact gggtctccag ttatgattga ttactacgta ccgttagccg tcacttttgt 1320 ggcttttgcg cgtagtaggt atcgcatgat caaaccaggg atggaaatgg tgaggcaacg 1380 aggagtgtcc attgtcgatc caaatgctga tgttgatttt gtcaacgtca aaggagaagc 1440 catcgccacc aaaagcatgg tgaaaacagc gattcgaggg cttctctttc cgaccagaac 1500 taaggtcgat gataataccg tcttgttata tacatgccca attcttgaat ccatcgtcga 1560 tgagataaaa accgccttag ggtgggattg ttgggcaacg gacgacgccg taattcagtc 1620 attaccttcc ttttataaga tggaagatgt ttttgaagtc acctcagacc atttttgctt 1680 aagtcatacc ttaaatgtcg attattggtt ggagggactt tatgattcgt atgatgaatt 1740 acgacaggcg cataaaatca gacttgcgca agaggaagca aggaagacca aagttgagaa 1800 tgccttgtta aaaattgctg aggttttaga gtctgatact tgtcctagtg gtttattgcc 1860 tctcaaactt gaaccgttag taagcagttt gattgagaag aagaccgatg agatcattac 1920 caagcctcaa tgctctgatg catccaagcc ccatatcaat cctcatgcgg atgctatcaa 1980 ggaagccata tcatactaca acgaattgga ggttgtagcg acgcgcaatt taagaggtgt 2040 gggagattac cttttttggc gtcagaaatc gaactatgcc agcgtgtggg gcgctgacga 2100 ttcaagatgt gtgttggagc cattatcccg cagatggttc aaccggcaaa accgaactga 2160 atatgaaaga ggcatgtcag ttgatggttt tgttcgacta gcctggaagg atggggattt 2220 aacacctgat acctgggcgt caatttccaa atacaatgtg ttattgttcg attccacatg 2280 tgtgtttgat gccagatcac gactgttacc aggcttgaat aaagccttgg taatggattg 2340 taaagcttcc gtgatcattg aggacggggt ggctggatgt ggaaaaacca cgtctctgtt 2400 gaagcaggcc aaaattgagt ctgatatgtt gttatctgcc aacagagaaa ctgcgagaga 2460 tgcccgcgag agcggagcga ttccagatgt tttgaagtac cgagtgagaa cattagattc 2520 ttacttgatg ttaaagaaat ggttcaccgc cgaccgttta ttggtcgatg aatgtttctt 2580 agttcattct gggatcattt atgccgccgc caccttggga caagtgaagg agataattgc 2640 ttttggtgat actaagcaga ttccatttgt ctcgcgtatc ccaactttct cgttgaagca 2700 tccgtccatc cgaggaaagt tgaagcccaa aaccataact taccgatgtc cacgggatgc 2760 cacagctgtt ttgagtgaga agttttataa aactaatgtg aaaacattta atccaacttc 2820 ctcctcatta tcgctgatag acattagttc cagcatggaa atcccagcag aaaaggatac 2880 gttatatatt atgcacacac aagctgataa gtgtgctatg cttcgtcatc caggtatcaa 2940 tccggataat gttatgacta ctcatgaagc tcaagggaaa acgtttaatc acgtgatttt 3000 agtacgattg agtaagacga ccaatttatt gtattccggg aaaatgcccg atgctggtcc 3060 ttcacacaat ttagttggtt tgtcacgaca taaatccacg ttacgatact atagtgtcta 3120 tgctgatgat ccagatgaca tgattgccac tggaattcgt tggtctaaaa ctttagacga 3180 acaagctcta gctcgttatc gagctggtga tttagtctca ctttcgtgag ctgatgaagg 3240 gtcctccggg atgtgctcag cacttaacct aagtcaagtt catatgccca cctttgctgc 3300 tccgggtgga tgcttcgtgc aaatgctatg aatgcctacg tatacatacg tagataccta 3360 tattttctct cctgagaaaa tatagatgcc tcccaaggag atgc 3404 //