ID JX232220; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC JX232220; XX DT 03-SEP-2012 (Rel. 114, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Tomato leaf curl virus isolate Raebareli segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2736 RA Aslam M., Mukherjee S.K.; RT ; RL Submitted (26-JUN-2012) to the INSDC. RL Plant Molecular Biology Group, International Centre for Genetic Engineering RL and Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX DR MD5; 039617e9eda2c1a989d463c7006c1915. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Tomato leaf curl virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="Raebareli" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="Mohammad Aslam" FT /collection_date="Mar-2012" FT /db_xref="taxon:28350" FT CDS 41..427 FT /codon_start=1 FT /product="AV3" FT /db_xref="UniProtKB/TrEMBL:J7K3C1" FT /protein_id="AFQ62670.1" FT /translation="MKFTLHGLFSAWGPINRLAHQVWIHKHVGSIIARISRKRSWSKVH FT ASCKISPRDREELFPRHSRLRSCPRSNSCSPSKELWRSDQQISSFQRPHRRYADVSTST FT APMELVQLSPLPASQKQRPGPTGR" FT CDS 120..458 FT /codon_start=1 FT /product="AV2" FT /db_xref="GOA:J7K146" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:J7K146" FT /protein_id="AFQ62671.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /codon_start=1 FT /product="AV1" FT /db_xref="GOA:J7JXI6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J7JXI6" FT /protein_id="AFQ62672.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(310..795) FT /codon_start=1 FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:J7K403" FT /protein_id="AFQ62673.1" FT /translation="MHVLHRCCARFIVKHVKNFPKILWGSCRTTVTDQEKHDTVSMVFC FT LDVFIHPYLSQHIDRFHTKSLPYAMCESSSTGNITNAHDFTNMRDIVPGFKGLHLARAF FT TAPWHVGTSIHSVHSGFSVHRPVGPGLCFCDAGNGDNCTSSIGAVEVETSAYLRCGR" FT CDS complement(1047..1454) FT /codon_start=1 FT /product="AC3" FT /db_xref="GOA:J7JWG8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J7JWG8" FT /protein_id="AFQ62674.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLKVFKTQVLRYLDMLGVIGI FT YNGIRAVYHVLDKVWDQLLMYDFYELKLDIY" FT CDS complement(1174..1593) FT /codon_start=1 FT /product="AC2" FT /db_xref="GOA:J7K3C3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7K3C3" FT /protein_id="AFQ62675.1" FT /translation="MQSSSHSRNHSIPVAKTSLPQKQKKSIRRRRVDLPCGCTYYISIN FT CHDHGFTHRGVHHCGSSREWRIYLGNSKSPVFQNFEARQQALPNTTRHHQDSNTIQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT CDS complement(1496..2581) FT /codon_start=1 FT /product="AC1" FT /db_xref="GOA:J7K151" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7K151" FT /protein_id="AFQ62676.1" FT /translation="MASPRRLRVNAKNYFLTYPKCSLTKEEALSQLQTLETPTKKKFIK FT ICRELHEDGSPHIHVLIQFEGKYQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQHTANDAYAKAINTGNKDDALNVLKELAPKDYVLQFH FT NLNTNLDRIFQPPSEVYVSPFSISSFDRVPADLVDWVSSNVVCAAARPFRSISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPTEAEEEHSQEAS" FT CDS complement(2248..2424) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7JXJ1" FT /protein_id="AFQ62677.1" FT /translation="MGLRISMFSSNSKGNTSARITDSSTWFPQVGQHISIRTFRELNQH FT RTSKHTSTRTETS" XX SQ Sequence 2736 BP; 739 A; 596 C; 620 G; 781 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cttatttagt gcgtggggac caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag atagagaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctaattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgcaaggt gcagtccttt gaatccaggc acgatgtctc tcatattggt 540 aaagtcatgt gcgttagtga tgttacccgt ggaactggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctg ggaaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt ttcttggtcc gtgaccgtcg tcctacagga 720 tccccacagg attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctag ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgtagttt ataatcaaca agaggccggc aagtatgaga atcatactga aaatgcctta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcaa gctttaattc atagaagtcg 1080 tacatcaata gttggtccca taccttatcc aaaacatgat aaactgctct tattccatta 1140 taaattccta ttacaccaag catatccagg tacctaagga cctgggtttt gaagactttc 1200 aagaaaatcc caatctgagg gcgtaagccc gtccagattt tgaaagttag aaaacacttg 1260 tgaagtccca gggctttccg caggttgtgg ttgaattgta tttgaatctt gatgatgtcg 1320 tgttgtgtta ggaagggcct gctgtcgtgc ttcaaaattt tgaaatacag gggatttcga 1380 atttcccagg tatatacgcc actctctgct cgatccgcag tgatgtactc ccctgtgcgt 1440 gaatccgtga tcatggcagt tgatcgatat gtaatatgta cacccacacg ggagatcaac 1500 tcgcctcctg cgaatgctct tcttctgctt ctgtgggagc gatgttttcg cgaccggaat 1560 agagtggttc ctcgagtgtg atgaagactg cattcttgat tgcccactgc ttcagtgctg 1620 catttttttc ttcgtccaga tattccttat agctgctgtt tggaccttta ttgcacagga 1680 agatagtggg aattccacct ttaatcatga ctggctttcc gtacttggtg ttgctttgcc 1740 agtcacgctg ggcccccatg aattctttaa agtgctttag atagtgggga tcaacgtcat 1800 caatgacgtt gtaccatgca tcattgctat acacctttgg gctcagatca agatgtccac 1860 acaagtaatt gtgtggtccc aaacaacgag cccacattgt tttgcccgtt ctactatccc 1920 cctctatgac tatgcttatg gacctaaaag gccgcgcagc ggcacacacc acattggacg 1980 agacccaatc gacgaggtct gccggaactc tgtcgaagga tgaaattgaa aatggagaaa 2040 cataaacctc ggaaggaggt tgaaaaatgc gatctaaatt tgtattcaaa ttgtgaaact 2100 gcagaacata atcctttggg gctaattcct ttaatacgtt caatgcatcg tctttattcc 2160 ccgtgttaat cgcctttgca tatgcatcgt tggccgtatg ctgaccacca cgagcagagc 2220 gtccatcgat ctggaaaaca ccccattcta ggacgtctcc gtccttgtcg atgtatgctt 2280 tgacgtccga tgctgattta gctccctgaa tgttcggatg gaaatgtgct gaccgacttg 2340 gggaaaccaa gtcgaagaat ctgttattct tgcactggta tttcccttcg aattggatga 2400 gaacatggat atgcggagac ccatcctcgt gaagctctcg acagatcttg atgaatttct 2460 tcttcgtcgg ggtttctagg gtttgcaatt gggaaagtgc ctcttcttta gttagagagc 2520 actttggata tgtgaggaaa tagtttttgg catttactct aagacgacgt ggcgaagcca 2580 taaaacctgt cgttttgatt cggcgtccct caacttatct atgtgattgg tgtctggagt 2640 cctatatata ggtaagacac catatggcag aattgtaatt ttgaaaagaa aattacttta 2700 attcaaattc cctatagtgg ccattcgtct aatatt 2736 //