ID JX219473; SV 1; circular; genomic DNA; STD; VRL; 2583 BP. XX AC JX219473; XX DT 03-SEP-2012 (Rel. 114, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Okra yellow mosaic Mexico virus - [Herissantia:Colima 1] strain Colima 1 DE segment DNA-B, complete sequence. XX KW . XX OS Okra yellow mosaic Mexico virus - [Herissantia:Colima 1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2583 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT "New Strains of Okra Yellow Mosaic Mexico Virus Isolated from Weeds"; RL Unpublished. XX RN [2] RP 1-2583 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (22-JUN-2012) to the INSDC. RL Molecular Biology of Plants, Instituto Potosino de Investigacion Cientifica RL y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. Lomas 4 RL seccion, San Luis Potosi 78216, Mexico XX DR MD5; 36a5a7e3b8d4e5141fb14ce442a18f5d. XX FH Key Location/Qualifiers FH FT source 1..2583 FT /organism="Okra yellow mosaic Mexico virus - FT [Herissantia:Colima 1]" FT /segment="DNA-B" FT /host="Herissantia crispa" FT /strain="Colima 1" FT /mol_type="genomic DNA" FT /country="Mexico:Colima" FT /collected_by="Gerardo R. Arguello-Astorga" FT /collection_date="01-Jan-2010" FT /db_xref="taxon:756895" FT gene 438..1205 FT /gene="BV1" FT CDS 438..1205 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="nuclear transporter; nuclear import/export of viral FT DNA; BV1; BR1; NSP" FT /db_xref="GOA:J7JUN6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:J7JUN6" FT /protein_id="AFQ60157.1" FT /translation="MYPVRFKRGFTFTPRRFYSRNHVFRRSTPFKRDDGKRRPVTVNKA FT HDEPKMSTQRIHENQYGAEFTMAHNSAISTYISYPNLGKTEPNRIRSYIKLKRLRFNTV FT KIERVSTDVAMDGTIPNTEGVFSLVIVVDRKPHLTAAGCLHTFDELFGAIIHSHGTLSI FT VPALKDRYYIRHVCKRVLSVEKDNVMVDIEGSTSLSNRRYNCWASFKDLDLDSCKGVYD FT NINKNALLVYYSWVSDTVSKASTYVSYDLDYIG" FT gene complement(1243..2124) FT /gene="BC1" FT CDS complement(1243..2124) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="plasmodesmata-associated protein, involved in virus FT cell-to-cell movement; MP; BC1; BL1" FT /db_xref="GOA:J7K1N6" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:J7K1N6" FT /protein_id="AFQ60158.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPIEIRPGESWASRSTVGTGHSDAD FT SEVENELHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMSAAQLNELVRTTVQECIK FT SSCNAPQPKIFK" XX SQ Sequence 2583 BP; 661 A; 544 C; 596 G; 782 T; 0 other; accggatggc cgcgcgattt tttccccccc ccacgtggcg taatcgcgcg ctctctccct 60 ggtgctgtcc tctctctcct ggtgcccttc tatacgtggc cgctcgctac tggtgctccc 120 tcgctacaat gggccatgtt gtcagtaaat tgttttgact gaccctttaa ttcaaattaa 180 aggttaaatc ttttatgact cgcgatatca attccaactt gaattattga ttcgtctttt 240 tcattatgcc ccattgtact atacggtcga cgtggccgat ttgtgacctt gctgctgagt 300 caagttaatc tgttgtttga gttatttttt tctataaatt gggcccggat catgtatatt 360 attcgaagtg actcagcagt ccatcacgtt tatttgaata gctaaatcat caattcatca 420 cattgtatcg gttgatgatg tatcctgtta ggtttaaacg tggttttaca ttcaccccac 480 gacgatttta ttcacgtaat cacgtgttta ggcgttctac acccttcaag cgagatgatg 540 ggaaacgtcg gcctgttact gttaataagg cccatgatga gcccaagatg tcaacccaac 600 ggatccacga gaaccaatat ggcgcagaat ttacaatggc ccataattca gccatttcaa 660 cctatatctc atatccgaat ttgggaaaga ctgaaccgaa ccggataagg tcgtatatca 720 agttgaaacg actacgtttc aatactgtta agattgagcg tgtttctact gacgtggcga 780 tggatggtac tattcccaac acagaaggag tgttctcatt ggtcatagtc gttgaccgaa 840 aacctcatct gactgcagct ggatgcctac acacgtttga cgaattattt ggtgcgataa 900 tccacagcca tggaaccttg tctatagtcc cggcattgaa ggatcgttat tacatacggc 960 atgtatgtaa acgggtactg tccgtggaga aggataacgt aatggtggat attgaaggat 1020 ccacttctct ttcgaacagg cgttataatt gttgggcaag ttttaaagat ctggatttgg 1080 attcatgtaa gggtgtttac gacaacataa acaagaacgc cctgttagtt tattattcat 1140 gggtatctga tactgtgtca aaagcatcga cttatgtatc gtacgacctt gattatattg 1200 gataattaat aataataagt aatttcgaaa taagaaaatt tattatttga atattttggg 1260 ttgaggtgca ttacaactac tcttgataca ttcttggacg gttgtcctaa ccagttcgtt 1320 taattgggct gccgacatgg taatgttgga ttccgctctc tgggccccta caatcgaagc 1380 agactctccc gggtctaaca cactggttcc cagcctactt aggtgcctgt acgggtggag 1440 ctcgttctcc acttctgagt ccgcatctga atgccccgtg ccgaccgtac tcctggaagc 1500 ccacgattca ccaggcctta tttcaattgg gcctctgagt ccaactctcg acatggacgc 1560 gcatctgatg ggcttccttt cccatcttcc gtagtctacg tgcgagaagt ccacatcctt 1620 gtcggtgaat tgtttggaaa ggatcttcac tgttggtgcc cggaaaggga tatccactga 1680 gtgtttcgcc gtcgacagtt tcagtttccc tttgaacttc gcgaagtggg tcctctgatg 1740 aacattcgta tcgcaaactc tgtagtagag tttccaggga attgggtcct ttaacgagaa 1800 gaacgaagcg gaaaagtagt ggagatctat gttgcacctg atgggaaaag tccacgacgc 1860 ttgcagagat tcgttgtccg tcatcctttt gtcgtggatc tccactatca ctgtccctgt 1920 ggcgttaatc ggaacctgct gcctatattc tatgacgcag tggtcgattt tcatgcagct 1980 ccggctaagc cttgccgtca actgtgacgc cgtcgacggg aattgcagaa ttatctcggt 2040 caggtcgtga gaaagctgat actcgtccct gtgagattct atgtaattaa aggcgttcgg 2100 aggatttacc aactgagaat ccatattaag aaaagaaggc cgcgcagcgg aaccttttgc 2160 tgaagttgaa ctgccgatga agaaattagg gtttgtttgg gaaacagtcg acgatcaaca 2220 gttgaagatg aagaaggttt tctgggttta ccagaaatta aatcagtacc tgaggaacaa 2280 ttatgttaga cgtactgatt atgggaagtg tttttgagaa agaggagaaa tctggtaaag 2340 atttcgaaga tgattatggt ttacagtgga tagtctttat atagacccct ttactctctt 2400 atagagagcg ttcgggagaa gtttgtgttt aggtgaaatg atggcagttt tgtaaataag 2460 agggtgtgta ccgattgagc tctctctaaa ctctgtgaat gaattggtac acaggtacac 2520 aatatatagt agaactctca ttaaagggat ttgcaacacg tggcggccat ccgatataat 2580 att 2583 //