ID JX183064; SV 1; circular; genomic DNA; STD; VRL; 2583 BP. XX AC JX183064; XX DT 29-JUL-2012 (Rel. 113, Created) DT 02-JUL-2013 (Rel. 117, Last updated, Version 2) XX DE Chickpea chlorotic dwarf virus isolate D320, complete genome. XX KW . XX OS Chickpea chlorotic dwarf virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2583 RX AGRICOLA; IND500619376. RA Kanakala S., Sakhare A., Verma H.N., Malathi V.G.; RT "Infectivity and the phylogenetic relationship of a mastrevirus causing RT chickpea stunt disease in India"; RL Eur. J. Plant Pathol. 135(2):429-438(2013). XX RN [2] RP 1-2583 RA Surapathrudu K., Akshay S., Verma H.N., Malathi V.G.; RT "Characterization of mastrevirus causing Chickpea chlorotic stunt disease RT in India"; RL Unpublished. XX RN [3] RP 1-2583 RA Surapathrudu K., Akshay S., Verma H.N., Malathi V.G.; RT ; RL Submitted (14-JUN-2012) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa, RL New Delhi, Delhi 110012, India XX DR MD5; bd2605b058a6f4116ffec8e7306561cf. XX FH Key Location/Qualifiers FH FT source 1..2583 FT /organism="Chickpea chlorotic dwarf virus" FT /host="Cicer arietinum" FT /isolate="D320" FT /mol_type="genomic DNA" FT /country="India:New Delhi" FT /isolation_source="leaf" FT /collected_by="VG Malathi" FT /collection_date="Jan-2011" FT /identified_by="Surapathrudu K" FT /note="genotype: Pusa 362" FT /db_xref="taxon:463360" FT CDS 132..410 FT /codon_start=1 FT /product="movement protein" FT /note="ORF V2" FT /db_xref="GOA:B4ERB7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B4ERB7" FT /protein_id="AFO38344.1" FT /translation="MERILYQVFPTDTNYSYDPPPVNTNSQGSSQTDFGKVVIALVVIL FT VSVGVFYLAYSLFLKDCILLFKAKKQRTTTEIGFGQTPARNQDHPQP" FT CDS 423..1160 FT /codon_start=1 FT /product="capsid protein" FT /note="ORF V1" FT /db_xref="GOA:B4ERB8" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B4ERB8" FT /protein_id="AFO38345.1" FT /translation="MSTVTWGNKRKRSDRSSKAKSKSSGSYVPRSVSSRRESLQVATFS FT WTSSGSGIKFSTGGAAYLVSNFPQGANDNCRHTNKTVLYKFMAKNTVYLDPSHYPKVFK FT CPFTFWLVYDKAPGASVPSTGDIFEGPSLFPANPWTWTVSRAACHRFVVKKTWSVVVES FT NGVDPGKAQSSSYYGPGPCNQIKSCNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVGA FT PSQKSDVYVNGYFRVYFKSVGNQ" FT gene complement(<1318..>2408) FT /gene="C1:C2" FT CDS complement(join(1318..1732,1819..2408)) FT /codon_start=1 FT /gene="C1:C2" FT /product="replication associated protein" FT /db_xref="GOA:I7BF47" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I7BF47" FT /protein_id="AFO38346.1" FT /translation="MPSANKNFRFQSKYVFLTYPKCSSQRDDLFEFLWEKLTPFLIFFL FT GVATELHQDGTTHYHALIQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGD FT IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWATKLQWLEYSANK FT LFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQEPRRTGARVPSLYICGPTRTGKTTW FT ARSLGRHNYWNGTIDFTTYDEHATYNVIDDIPFKFVPLWKQLIGCQFDFTVNPKYGKKK FT KIKGGVPSIILTNRDEDWIPAMSEHQKEYFTDNCEIHYMDDGETFFARESSSH" FT CDS complement(1318..1752) FT /codon_start=1 FT /gene="C1:C2" FT /product="Rep B" FT /note="ORF C2" FT /db_xref="GOA:I7BBN3" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I7BBN3" FT /protein_id="AFO38347.1" FT /translation="MDGRSNQEPRRTGARVPSLYICGPTRTGKTTWARSLGRHNYWNGT FT IDFTTYDEHATYNVIDDIPFKFVPLWKQLIGCQFDFTVNPKYGKKKKIKGGVPSIILTN FT RDEDWIPAMSEHQKEYFTDNCEIHYMDDGETFFARESSSH" FT CDS complement(1530..2408) FT /codon_start=1 FT /gene="C1:C2" FT /product="Rep A" FT /note="ORF C1" FT /db_xref="GOA:I7BBN8" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I7BBN8" FT /protein_id="AFO38348.1" FT /translation="MPSANKNFRFQSKYVFLTYPKCSSQRDDLFEFLWEKLTPFLIFFL FT GVATELHQDGTTHYHALIQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGD FT IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWATKLQWLEYSANK FT LFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQVSIDAYTLVHPVSYQQAQSDLEWMA FT DLTRNREGLELESPASTSADQLVPERPPGLEASDDTTTGMGPSTSPRTTNTRPTMSLTT FT SPSSSSHCGSN" XX SQ Sequence 2583 BP; 661 A; 517 C; 651 G; 754 T; 0 other; accggcgtgg cccacctttt cgcgagcact ttagtgcgag cggttcagat ttaaagtgga 60 aaagttcccg cccactaggg tttgctttac cttttgcttt ataaaaggcg cactaatggg 120 tagaccgtag aatggaacgt attctgtatc aggtatttcc tacggatacg aattattcgt 180 acgatcctcc tcctgtgaat acgaattccc agggatcctc tcaaacggat ttcgggaagg 240 tggttatcgc cttggtggtt attctggtta gtgttggtgt gttctatctg gcttatagtc 300 tgttcttgaa ggattgtatc cttctgttca aggcgaagaa gcagaggacc accactgaaa 360 tcgggtttgg tcaaaccccg gctcgaaacc aggatcatcc tcaaccttag gcggggtgca 420 tcatgtcaac tgttacgtgg ggaaacaaga ggaagcgtag cgataggtcc tcgaaggcga 480 agagtaagtc ctctgggtct tatgtgccga gatctgtgtc ctccaggagg gaatcgttgc 540 aggtggctac cttttcctgg accagttctg gttcgggtat caagttctct actggtggtg 600 ctgcctacct tgtgagtaat tttccacagg gtgccaacga taactgtcgt cacaccaaca 660 agaccgtgct atacaaattc atggccaaga atacggtgta cttggaccct agtcattatc 720 ctaaggtctt taagtgcccg ttcacttttt ggctggtgta cgacaaggct cctggtgcaa 780 gtgtccctag tactggggac atatttgaag gcccttctct attccctgct aatccctgga 840 cgtggactgt gtctagggct gcctgccatc gttttgttgt caaaaaaacg tggtcagtgg 900 tggtggagag caatggtgtt gatccaggaa aggcccaatc cagttcctat tatgggcctg 960 gaccttgtaa tcagattaag tcctgcaata agttctttaa gaggctgggt gtgtcaacgg 1020 agtggaaaaa tagttccacg ggggatgttg gtgatataaa ggaaggagcc ctttacattg 1080 taggtgctcc ttcccagaag tctgatgtat atgtaaatgg ttatttccga gtgtacttca 1140 agtccgttgg caatcaataa aaatttatta ttatgaatat tttacattgt gcaagtaggt 1200 agaaattcaa tatgttacat tacacacgaa ataagcaaaa aaacacacct aaaacaaaag 1260 tacactaccc acgataactt ataactttag cttaaccccg tatgaggaga ggcacgttca 1320 gtgactcgac gattcccggg caaaaaaagt ttcgccgtca tccatataat ggatctcaca 1380 attgtctgta aagtattctt tctgatgctc agacatagca ggaatccagt cctcatctct 1440 atttgttaaa attatggaag ggacaccacc ttttattttc ttcttttttc catacttagg 1500 gttgacagtg aagtcgaact ggcaacctat taattgcttc cacaatggga cgaacttgaa 1560 ggggatgtcg tcaatgacat tgtaggtcgc gtgttcgtcg tacgtggtga agtcgatggt 1620 cccattccag tagttgtgtc gtccgaggct tctagcccag gtggtctttc cggtacgagt 1680 tggtccgcag atgtagaggc tggggactct agctccagtc cttctcggtt cctggttaga 1740 tcggccatcc attcaaggtc agattgagct tgctgatatg aaactggatg gacaagagtg 1800 taggcgtcga tgcttacttg gtacaggtgt gtatccctcc attgtgcgag atcctcgtgg 1860 cagcggagat ctgactcagt gaacggcgac acatatgctt caggttgtgg agggaatagc 1920 ttgtttgcgg agtattcaag ccattgaagc ttggtagccc attcatgtgg gaattcctcc 1980 ttgatcatgt caagatattc ctccttagac gttgcagtct ggataatagt tcgccatcgt 2040 gcgtcagatt tgcgaggaga gactttatga tctctgaaat ctcctcttgt tttaatatct 2100 ccgtccttgg aaatgtattc aaggacttgt ttagagtttc tagctggctg gatattaggg 2160 tgatttcctt caaaatcgaa aaaagaagga tccctaatcc aaggtttttt atcaagctgg 2220 ataagagcat gatagtgggt agtgccatct tgatgaagct cagtagcaac accaaggaag 2280 aaaataagaa aaggtgtgag tttctcccag agaaactcga ataaatcatc tctttgagat 2340 gagcatttag ggtaggtaag gaaaacatat tttgattgga atctgaagtt cttgtttgca 2400 gaaggcatgt ttgttgtgac tccaagggtt ggcttgaaac tctatcttat aaccggcgtg 2460 gagacttgga gacaagggta gtttggtcat ttaggctggg tagtggaata atgacatggc 2520 agtgacttaa agacgaagtc tttgcgaaag cgaataaggt ggagccacgc cgaaattaat 2580 att 2583 //