ID JX177647; SV 1; linear; genomic RNA; STD; VRL; 8914 BP. XX AC JX177647; XX DT 11-JUN-2013 (Rel. 117, Created) DT 11-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Watermelon silver mottle virus isolate GZ segment L, complete sequence. XX KW . XX OS Orthotospovirus citrullomaculosi OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-8914 RX PUBMED; 23515944. RA Rao X., Wu Z., Li Y.; RT "Complete genome sequence of a Watermelon silver mottle virus isolate from RT China"; RL Virus Genes 46(3):576-580(2013). XX RN [2] RP 1-8914 RA Wu Z.-Y., Rao X.-Q.; RT ; RL Submitted (14-JUN-2012) to the INSDC. RL Laboratory of Plant Virology, South China Agricultural University, 483 RL Wushan Rd., Guangzhou, Guangdong 510642, P.R. China XX DR MD5; 52b129cb6a5e14b648890e2b2a44b9a9. XX CC GenBank Accession Numbers JX177645-JX177647 represent sequences CC from the 3 segments of Watermelon silver mottle virus isolate GZ. XX FH Key Location/Qualifiers FH FT source 1..8914 FT /organism="Orthotospovirus citrullomaculosi" FT /segment="L" FT /host="watermelon" FT /isolate="GZ" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="15-Jun-2011" FT /db_xref="taxon:3052571" FT CDS 33..8297 FT /codon_start=1 FT /product="L protein" FT /note="RNA polymerase" FT /db_xref="GOA:R9QZT1" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:R9QZT1" FT /protein_id="AGH32784.1" FT /translation="MNIQTINSFLDTSGEITVYLQAIKDDIMAMSNIVERSYPEGRGVI FT ESGLNSIMSMNYILDKIEDMKSKYHQSSSSIDQKEMETEIYLFLDKYKELELMRHDLFG FT VLAGRRLHFAPKHRSDVFLKDCLMSYIEFCNTSTSIINQIDDIDGLKEKLVFQHLTPDN FT YTIYKETKGEKACLMIYDWKVSVDTMSETKTSENYYTSVWKTFKDINIDGQPFLERHPI FT FITIVILNPSGNMSITATTSRVIQEFRNSPYKTFADRNRAAIASKLISVNSLGQLIGLG FT ADHFRRFYSETQAFKNSLLAKVGEYMNRSSEVFFSHWSYEYRKTNLSNNQICQDIIDLI FT DAMPTDTIGKDMLVHFLFGNYLYFKETMSDLHLKDKFEGYKAHCEMMKIVPIEKEEKLK FT EYLDENEQLFESLYESHLGKIKSDVLSAKAKEIEIESIESAFNINAEEYQKGYPGCFTN FT NLQETKTNFSICWSPMTQELEMNELNYNNAIIQSFRDTFNDQVKLIHHKSYGGDKMDIH FT FSMTLFNLVRTCLIDLSTDTTGHSEAALEDVVDVKDGSIQVKRTENSQKWREIGDIKTR FT NGNEFTLSPLTSHEARKHFFKGLSLMYVDMGKKKKIDIKNDLKSKIQESIAKQKDEELS FT NVSGEYDVSKANIPFQMGLKEITHNKKLIRHDNPDVKYHCESMIESMYVLYGMDERKNK FT NSKVSSVYNEYCSNPSLLFTKGNLIETEMVISKNIHEVAKELSVYTYSEDMMQMAKGLM FT VADRFMKKTDFKILTCANTSMICLAFKGDGINTGKSGVPYITLHKVEKDIQPYFVSLYT FT KELIVSFKHGNHFINIMRPQRLNQVRLLSLFKAPSKVPILFSQYSLLSTEIKKWLNQPS FT VDVFTCPENKIQYLQKILFSSVIIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIAE FT KFDPDITNVIDCFFVSGIKNLLLKMEGINLSNSIKPLTIDQENDMSGGISDLDIVCPIT FT GSTLKTIECLYNNVYLAIYMMPKSLHTHVHNLTTLLSVPAEWEIKFREKMGFLIGDEIK FT PKKEMFNDSGPFSINGVLNVKTLFDYYKKNIINVGACRSNIEDKEDFLSAPYKIKTLTS FT SKKCSKADIIKNSEIVSALKSAFGKKPDDIKGSDLYILKGVLKCFEEDRESLMNFMEVE FT SLDESKYLHFFSNMMSGDNKVLMKTNQDKFYYKSHPLTVETFMKVRYGYFKTTTVLKSK FT KVSEELYDLIKEFNKITEVDLEALEKLGRGLKGNRVTFIQLLEFILMKSRTNAGNTDFL FT VSVFEKMQRTKMDREIYLMSMKTKMMLYFIEHTYKHIAQSDPSEAISISGDYKIKNLAS FT LSYDTITNYNTALQKNLECKMAFLSADQSKWSASDLTYKYILAVIMNPILTTGEINLMC FT ECIMMYVKLKRVCIPTDIFLNLKRGQTEYGSYGTALSVLTDNLETNTFPVSMNWLQGNL FT NYLSSVYHSCAMMGYEKAMKKMKDYDFTIRWMVHSDDNATSIVVRGDIKKLLSSFNCFS FT LSELLFRSIQSHFKSYCITLNPKKSYASESEVEFISERIINGAVIPLYCRHLANCSTES FT SHNSYFDDLMSLSIHITMLLRKGCPNELIPFAYAAIQIQSLSIYSMLPGEENDIDSIVK FT GIDFPLTKKEIPICAGGWMYAPIELLSILGPSSNDQLIYYKILLDFFNLKDFNSLKKNV FT NSLGYIDLRINELFKRMKYQKMTSADKKMICMVNLFKTSLMSEDCDSLNVGMKFQSMIT FT QIIKLPSFVSEGSLLKNSSFQDFCKLFPNLKKNTDILNALKPINFDERDSDEPNESRFL FT SQIQLEELSRHMSCHPESFLIAPMNDKDYILTNLYMYSSVSKRNQMSNQSTEKLALDRI FT LRSKAKTFLDSNSKEMVSYKDNMSLKMAEIMNPAGNDFKIINTISGLMVRDMNFEMVVS FT LMENTVANASIPKANYNFRWFITEKVPSVIEGSPGLIVMSAVYGMDYLIELGLKKLPLT FT ETSISILHDIFGNRKTFDDVRECIRNVNNQYKTEEFQDANDLKRYVLSINYMIQSQNKL FT LSINTCFSRKNFPFYSKYNLGKTFITNTLAIWSTIYSRLTNINFYTNLNFVIDRSSRLI FT ISLQRDMNLEKLIDCCAYISDRLQSLFPDMTIESIKQVLNRLNFNGVDLMRKMKSEITE FT VKRAINNIKTSTHVTLSFRPQMIAMSKHAAWLYNFGYVNEKEFKFVIDQIRQSEVHYIK FT TDEQDVRGYYVSGHTYKIGIKTQYNYGQLAMSNQDISIHLHSPYEYQREDDGKIWEVHV FT KSAYKLLQKLLIDKQSAIKTFLNIRTDLMPNQFCIHESSNKTLLILINDTTKPITLERI FT KFKGDIKYIPSSDFAWNMMSNQSKYKLRMAETGECYTELYKMIDNNDSLMNTILTNLRK FT SLEYGNEMENLIEQSTRGIDDEETVEYIRDSVDQIHKLAVEGLETCKTSEEFENYLKRV FT DFQSTVDFHKDLLEQIVEEKYGSTDRLNTAVEKLTRWTNSLSTFKDVCTMLKFSMVNDS FT KGIKTYKANGADFHSLSASEVMTSQGFDLFELLKLIKACEACHTSNSVLNLIAFKNIKN FT KTFIPGFKRTLPNTVHFDYEMKLNNEIMNKFYEYKTISLQDIKVSDRVKAVLETHGFSV FT TGQNLKLEEVDLELNPVEIIDDSSTYDQIAKQMRLTKKKSSYLIPANTLLLGELMKFLM FT LCIKGEEHDIMKLLRSHFAMKPVRENRLLCIQDAVMTCRISGFIQRHFLNDKKK" XX SQ Sequence 8914 BP; 3294 A; 1366 C; 1635 G; 2619 T; 0 other; agagcaatcg tgcaacaata agaatatcag taatgaacat ccaaactata aacagtttcc 60 tagatacttc aggcgaaatt actgtgtatc tccaagcaat aaaagatgac attatggcaa 120 tgtcaaacat tgtggaaaga agttaccctg aaggcagagg ggtgattgaa tcaggactta 180 attcaataat gtcaatgaat tacatcctgg acaagattga ggacatgaag tctaaatacc 240 atcaaagttc ttcttctatt gatcaaaaag agatggaaac agaaatctat ctgtttcttg 300 ataaatacaa ggaactagag ttgatgaggc atgatctttt tggtgtttta gctggaagaa 360 gattgcattt tgctcccaag cacagatctg atgttttcct taaagactgc cttatgtctt 420 acatagagtt ttgcaacact tccacatcta taataaacca gatagatgac attgatggcc 480 tgaaagagaa acttgtcttt cagcatttga cccctgacaa ttacacaata tacaaagaaa 540 ccaaaggtga gaaagcatgt ttgatgatat atgattggaa agtctctgtt gataccatgt 600 cagaaactaa aacatctgaa aactattaca caagtgtatg gaaaacattc aaagatatca 660 atatagacgg gcagcctttc ttagaaagac atcctatatt tataaccatt gttatattga 720 acccaagtgg aaacatgtca attacagcta caactagcag agtcattcaa gagttcagaa 780 attcacctta caagactttt gctgaccgga acagagctgc tattgcatca aagcttatat 840 ctgttaattc attaggtcaa ctcataggtt taggagctga tcatttccgg cgattttatt 900 cagagacaca agcattcaaa aactcccttc tggccaaagt tggagaatat atgaacagat 960 catcagaagt tttctttagt cattggtcat atgagtatag gaaaaccaat ctatcaaaca 1020 atcaaatctg tcaagatatt attgatttga ttgatgccat gcctactgat acaataggaa 1080 aagacatgct tgttcatttt ctgttcggta attacctgta cttcaaagaa accatgagtg 1140 atctccacct taaagataag tttgaagggt ataaagcgca ttgtgaaatg atgaagattg 1200 tccctataga gaaagaagaa aaactcaaag aatacttgga tgaaaatgaa caattatttg 1260 aaagtttgta cgaaagccat ttagggaaaa taaagtctga tgttttgtct gcaaaagcta 1320 aagagataga aatagaaagt attgaaagtg cttttaatat taatgcagaa gaatatcaaa 1380 agggataccc tgggtgcttt acaaacaacc tccaggaaac taaaacaaat ttttcaattt 1440 gctggtcacc aatgactcag gaattagaaa tgaatgaact taactataac aatgcaataa 1500 tacagtcttt tagagacact ttcaatgatc aagtgaagct gattcaccat aagtcatatg 1560 gaggtgacaa aatggacatc catttctcta tgactctttt taatttagta agaacttgcc 1620 taatagatct aagtacagat acaacaggtc attcagaagc agctttagag gatgttgtcg 1680 atgttaaaga cggtagcatt caggtaaaga gaactgaaaa ctctcaaaaa tggagagaaa 1740 taggagatat aaagacaagg aatggcaatg aattcacatt gtcaccgttg actagtcatg 1800 aagcaagaaa gcatttcttt aaaggtttaa gcttgatgta tgttgacatg ggaaaaaaga 1860 agaaaattga cataaaaaat gatctgaaga gcaaaattca ggaatctata gctaaacaaa 1920 aggatgaaga gttaagcaat gttagtggag aatatgatgt gtctaaagct aacatacctt 1980 tccaaatggg tcttaaagaa atcacacaca ataaaaaact tatcagacat gataatcctg 2040 atgtaaaata tcattgtgag tcgatgattg aatctatgta tgtcctttat ggtatggatg 2100 aaaggaaaaa caagaatagt aaagtaagct ctgtttacaa tgaatattgc tcaaaccctt 2160 cattgctttt tactaaaggc aatctgatag agacagaaat ggtgatttct aaaaacattc 2220 acgaggtagc caaagaatta tctgtatata catacagtga agacatgatg cagatggcta 2280 aagggttgat ggtggctgat aggtttatga agaagacaga ttttaagatt ctaacttgcg 2340 ctaacacaag catgatatgc ttggcattca aaggtgatgg cattaacaca gggaaatcag 2400 gagttccata tattacttta cataaggttg aaaaggacat acagccttat tttgtttctt 2460 tatacacaaa ggagttgatt gtctcattca aacatggtaa tcattttatt aatattatgc 2520 ggccacagag attaaaccaa gtcaggcttc ttagtttgtt taaagctcct agcaaagttc 2580 ccatcctttt ttcacagtat tctttgctga gtacagaaat aaaaaaatgg ttaaatcagc 2640 catctgtgga tgtattcaca tgcccagaaa acaagatcca atatctccaa aaaatattat 2700 tctcttctgt gatcataggc actgtcacca agcttagcag gatgggaatt tttgatttca 2760 tgagatatgc aggatttcta ccgctatcag attattctaa cataaaagaa tatattgcag 2820 aaaaatttga ccctgatata acaaatgtta ttgattgctt ctttgtctca gggataaaaa 2880 atcttctttt gaaaatggaa ggtataaatt taagtaatag cataaaaccc ttgactattg 2940 atcaggaaaa tgatatgtca ggaggaatat cagatctaga tattgtctgc cctatcacag 3000 gatcgacatt aaagactata gaatgtttat acaacaatgt ctatcttgcc atctatatga 3060 tgccaaaatc cctccacacc catgttcata atctcaccac acttctgagt gttcccgcag 3120 aatgggaaat taagtttaga gagaaaatgg gttttcttat aggtgatgaa attaagccaa 3180 aaaaagaaat gttcaatgac tctggtccgt tttctatcaa tggagtacta aatgtgaaaa 3240 ctctattcga ttattacaag aaaaatatta tcaatgtagg tgcttgcagg tcaaacatag 3300 aagataagga ggattttttg tctgcaccat acaaaataaa aaccttgaca tcctctaaaa 3360 aatgctcgaa ggctgatatt ataaaaaatt ctgaaatagt ttcagctctg aaatcagcat 3420 ttgggaaaaa gcctgacgat ataaaaggat ctgatcttta catattgaaa ggagttctta 3480 aatgctttga agaagataga gaatcattaa tgaatttcat ggaggttgag agtctggatg 3540 aatcaaaata cctacatttc ttttctaata tgatgtcagg agataacaaa gttctgatga 3600 agacaaacca agataaattt tattacaaga gtcatccttt gacagttgag acatttatga 3660 aagtcagata cggttacttt aaaacaacca cagttttgaa atcaaagaaa gtaagtgaag 3720 aactttatga cttgatcaaa gaattcaaca aaataacaga agttgattta gaagctttag 3780 aaaaattggg tagaggtctg aagggcaaca gagttacatt catacaatta ctggaattta 3840 ttttaatgaa atctagaact aatgctggaa atacagattt tcttgtgtcg gtctttgaaa 3900 aaatgcaaag gacaaagatg gatagagaaa tttatcttat gagcatgaag acaaaaatga 3960 tgttgtattt tattgaacac acgtataagc acattgctca atctgacccc tctgaggcaa 4020 tatcaatatc tggagattat aaaataaaga atttggcatc cctatcatat gatactataa 4080 ccaactataa tacagcactt caaaagaatc tagaatgcaa aatggctttc ttatcagcag 4140 atcaatcgaa atggtctgca tcagatttaa cctataaata catattagct gttataatga 4200 accctatatt gactactgga gagataaatt taatgtgtga gtgcataatg atgtatgtaa 4260 agttgaaaag ggtgtgcatt cctactgaca tttttcttaa cctcaaaaga ggtcagacag 4320 aatacgggtc ttatgggact gctttatctg tattaacaga caatttagag acaaacacat 4380 ttcctgtttc catgaattgg cttcaaggga atttgaatta tttatcatct gtctaccatt 4440 cttgtgcaat gatgggttat gagaaagcca tgaagaaaat gaaagattat gacttcacta 4500 taagatggat ggtacactcc gatgataatg ccacatcaat agttgtcaga ggagacataa 4560 aaaagctctt atctagcttc aactgtttta gtttgtcaga attactattt cgtagcatcc 4620 aatcccactt taaaagttat tgcataacac tgaatcctaa gaagagctat gcatcagaat 4680 cagaggttga gttcatatca gaaagaatca taaatggtgc tgtaatacct ttgtattgca 4740 gacatctggc taattgtagc acggaaagtt ctcacaatag ctatttcgat gatttaatgt 4800 ctctttctat tcacattaca atgcttttga ggaaaggttg cccaaatgaa ttgataccat 4860 ttgcttatgc agcaatacaa attcagtcac ttagtatata ttcaatgtta ccaggagaag 4920 agaatgatat agattcaatt gtcaaaggaa ttgatttccc tctaacaaag aaagagatcc 4980 ccatatgtgc tggaggttgg atgtatgccc ctattgaatt gttatctatt ttaggacctt 5040 catctaatga tcagttgatc tattataaaa ttttactaga tttcttcaac ttaaaagatt 5100 ttaatagttt aaaaaagaat gtcaattccc tgggttatat tgacttgagg attaatgaac 5160 tattcaaaag aatgaaatac cagaaaatga caagtgctga caagaaaatg atatgtatgg 5220 tgaatctgtt taagacaagc ttaatgtctg aagattgcga tagcttgaac gtaggaatga 5280 aatttcaatc catgataaca cagattataa aactgcctag ttttgtcagt gaaggttctc 5340 tgctaaagaa ttctagtttc caagatttct gtaagctatt cccaaatctg aaaaagaaca 5400 cagacatact taatgcatta aagcccatta actttgatga aagggattca gatgagccga 5460 atgagtccag gtttctatcc cagattcagt tagaggaatt aagcaggcat atgtcatgtc 5520 acccagagtc atttttaatt gcaccaatga atgacaaaga ttatattttg acaaacctct 5580 atatgtacag tagtgtaagc aagagaaatc aaatgtctaa tcagtcaacc gagaaactgg 5640 cattagatag aatacttagg tcaaaagcta agacattcct agactcaaat tcaaaagaaa 5700 tggtctccta taaagacaac atgtcattga aaatggcaga aataatgaac ccagctggaa 5760 atgattttaa aatcataaac acaatatctg gattgatggt gagggatatg aacttcgaga 5820 tggtggtgtc tctaatggaa aacacagttg ctaatgcttc tatccctaaa gcgaactaca 5880 atttcaggtg gttcattaca gaaaaagtgc caagtgtaat tgaaggatca cctggtttga 5940 ttgtcatgtc agctgtttat ggtatggatt atttgataga gctgggttta aagaaacttc 6000 ctctgacaga aacttctatc tcaatattgc atgatatttt tgggaacaga aaaacatttg 6060 atgatgtcag agaatgcatt cggaatgtca acaatcaata taaaacagaa gaattccaag 6120 atgctaatga tctaaaaaga tatgttttga gtatcaatta tatgattcag tctcaaaata 6180 agcttttatc catcaacaca tgtttttcta ggaaaaattt cccgttctat tctaaataca 6240 atctgggaaa gacattcatt accaacactt tagccatatg gagcactata tatagtcgct 6300 tgacaaatat aaatttctat actaacttga actttgttat tgacagaagt tctcgactca 6360 tcatatcttt acagagagac atgaacttag aaaaactgat tgactgctgt gcttatattt 6420 ctgatagact gcaaagcttg tttcctgaca tgaccataga atccatcaaa caagttttga 6480 atagattaaa tttcaatgga gtagatctta tgaggaaaat gaaatctgaa ataacagaag 6540 taaaaagagc tataaacaac ataaaaacgt ctactcatgt cactctttca ttcagaccac 6600 aaatgattgc aatgagtaaa catgcagcat ggttatacaa ctttggatac gtgaatgaaa 6660 aagaattcaa atttgtgatc gatcaaatca ggcagagtga agttcattat attaaaacag 6720 atgaacaaga tgtcagaggt tactatgttt caggtcacac atataagatt gggataaaaa 6780 ctcaatataa ttatgggcag ctagccatgt caaatcaaga tatatcaata catttacact 6840 caccttatga atatcaaaga gaagatgatg gaaagatatg ggaagttcat gttaaatctg 6900 cctataaact gcttcaaaaa ctgttgatag ataagcaaag tgctattaaa acattcctca 6960 acatcaggac tgatctgatg ccaaatcagt tttgcattca tgaaagctca aataaaaccc 7020 ttttaatatt aatcaatgat acaacaaaac cgattacact ggagagaatt aaattcaaag 7080 gtgatataaa atatatacct tcttctgatt ttgcttggaa catgatgagc aaccaatcaa 7140 aatacaagtt gcgtatggct gagacgggag aatgttatac agaattatac aaaatgatag 7200 ataataatga tagcctgatg aataccatct tgaccaactt aagaaaaagc ctggagtatg 7260 gaaatgagat ggagaatttg atagagcagt cgacgagagg tatagatgat gaagaaactg 7320 tcgagtatat cagagattca gtagaccaga ttcataaact ggcagtagaa ggtttagaga 7380 catgtaaaac atcagaggaa tttgaaaatt accttaagag agttgatttc cagtccactg 7440 ttgatttcca taaagattta ttagagcaaa ttgttgaaga aaaatatggg tccacagata 7500 gattgaatac tgctgtagaa aagctgacta gatggacaaa tagcttgtca acatttaaag 7560 atgtttgcac tatgttgaaa ttctccatgg ttaatgattc taaagggatt aagacataca 7620 aagctaatgg agcagacttc cattcattgt ctgcaagtga agtcatgact tcacaaggat 7680 ttgatttatt tgaacttttg aaattgataa aagcttgtga agcttgtcac actagcaatt 7740 cagtcttgaa ccttattgct tttaaaaata taaaaaacaa aacatttata ccaggattca 7800 aaaggacttt acccaacact gttcattttg attatgagat gaaactaaat aatgagataa 7860 tgaataaatt ttatgaatat aaaaccatct ctctccagga tataaaagtc tctgatagag 7920 tcaaggcagt tctagaaacc catgggttta gtgtaactgg gcagaatctg aaactagaag 7980 aagtggattt ggagctaaat ccagtggaga tcatagatga ttcttccaca tacgatcaaa 8040 ttgcaaagca aatgagatta acaaagaaaa aaagctcata cctgatacct gcaaatactt 8100 tattattagg agagctaatg aaatttctaa tgctatgcat taaaggagaa gaacatgata 8160 taatgaaatt gttgagaagt cattttgcaa tgaaaccggt aagagagaat aggctacttt 8220 gcattcaaga tgctgtcatg acttgcagaa taagtggatt catccaaagg cattttctta 8280 acgataaaaa gaaatagttt tgttaggtgt ctcagatagt ttggaaaatt ttatctcttt 8340 agcaactcca aactattcag tccaggagcc atttgaagca gaggctttaa taaagaaagc 8400 tctgctagaa gtgtatgatt ctggaaaata caaaatattg aagaatataa gaagctacat 8460 agttgcagat gtagagttcc ttacagagaa atgcttgtac tcaaatataa ctaatgaaga 8520 aataagtagc atgatattca atgctgttag caaaatcgat ctagaactat ctaatttgaa 8580 gccaaaaaag agaaaaaaga ggttggacct gcatgatgta ttcaataaat ttttaggatc 8640 aggtgcaacc tcttcagaac aagaataaga ggaagttaac ttatgggcga gaggaaaggg 8700 ataaaccata gaataggaaa ccagacttta gaagcaggaa aagagcacaa tgtcaaaggg 8760 catatttagg aacaagagga taaaaatatt ctaactcggt ctaggatgaa acgtagtcat 8820 aatttctcca cccgatagtg aggtctgaag tagtatttct taattaaatt gagactgagt 8880 ttagaatact tttattttgt tgctcgattg ctct 8914 //