ID JX131283; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC JX131283; XX DT 26-AUG-2012 (Rel. 113, Created) DT 26-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Watermelon chlorotic stunt virus segment DNA-A, complete sequence. XX KW . XX OS Watermelon chlorotic stunt virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Anfoka G.H., Haj Ahmad F.W., Adwan H.J., Abu Mallouh S.A., Al-Taleb M.M., RA Odeh W.H.; RT "Sinapis arvensis is a natural host of five begomoviruses in Jordan"; RL Unpublished. XX RN [2] RP 1-2753 RA Anfoka G.H., Haj Ahmad F.W., Al-Taleb M.M.; RT ; RL Submitted (03-JUN-2012) to the INSDC. RL Department of Biotechnology, Faculty of Agricultural Technology, Al-Balqa' RL Applied University, Al-Salt 19117, Jordan XX DR MD5; e11f8b06a9bcd5f5173f1b564558d43b. XX CC GenBank Accession Numbers JX131283-JX131284 represent the complete CC genome of Watermelon chlorotic stunt virus. CC ##Assembly-Data-START## CC Assembly Method :: CLC Main Workbench v. 6.6.2 CC Coverage :: Complete CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Watermelon chlorotic stunt virus" FT /segment="DNA-A" FT /host="Sinapis arvensis" FT /mol_type="genomic DNA" FT /country="Jordan" FT /collection_date="2011" FT /db_xref="taxon:35341" FT CDS 156..515 FT /codon_start=1 FT /product="AV2" FT /db_xref="GOA:A2THD6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A2THD6" FT /protein_id="AFQ00058.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVESTYEPNTLGHELIRDL FT ILVLRARDYGEANRRYSHFHSRFEGSSKTELRQPLHEPCSCPHCPRHKQASTMGQQAHV FT SKAQDVQDVSKPRCP" FT CDS complement(220..987) FT /codon_start=1 FT /product="AC5" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B2CZP2" FT /protein_id="AFQ00059.1" FT /translation="MILILRSLLVVVYHMIVHTIEAFYQRLLLHPRGATDHGGMKLSHN FT LETIAKIVLNCRSAGLVVEHIKNLSEVHWTGPIWTTITNKKEHDLIRMILFFYVLIHPD FT LAKNIYRLHTKPFSDTMSDSTPPSNITDTPDDTGVFNVVSLFVRLNFARAFAALRDIWA FT SIHPVHPGLSIHGPVGPLSTLACDEDSGGKSTAHVGAVEVQFSTNLRNGSGNENISCSL FT RHNHGPGGQGSDRGSIRGPKYWARRSIQRPAST" FT CDS 316..1092 FT /codon_start=1 FT /product="AV1" FT /db_xref="GOA:B2CZP3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B2CZP3" FT /protein_id="AFQ00060.1" FT /translation="MAKRTGDILISTPVSKVRRKLNFDSPYMSRALAPTVLVTSKRRQW FT ANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRRSGITH FT RVGKRFCVKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFYRVYNHVVYNHQETAKYE FT NHTENAMLLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1089..1493) FT /codon_start=1 FT /product="AC3" FT /db_xref="GOA:D9J2U3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D9J2U3" FT /protein_id="AFQ00061.1" FT /translation="MDSRTGEYITADQAWNGVFTWKINNPLYFTIIDHHQRPFLCRHDI FT IHMQIRFNHNLRRALGIHKAFLNFRIWTTLRPQTGRFLRVFRTQVLKYLDMLGVISLNL FT VVRAVSHVLENVLVGTIDVQENHVIKFDLY" FT CDS complement(1234..1641) FT /codon_start=1 FT /product="AC2" FT /db_xref="GOA:J7HDP7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7HDP7" FT /protein_id="AFQ00062.1" FT /translation="MPNSSSSQNLSSQPSIKIRHRLAKKKTIRRRRIDLKCGCSYYLHI FT SCQNHGFSHRGIHYCGSSMEWRVYLEDKQPPIFHDNRSPPTPLSLPSRHNTHANTIQPQ FT PSEGVGDSQSFPELPNLDDFTASDWSFLKGI" FT CDS complement(1541..2626) FT /codon_start=1 FT /product="AC1" FT /db_xref="GOA:J7HKM0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7HKM0" FT /protein_id="AFQ00063.1" FT /translation="MRPPRFRIQAKNIFLTYPRCSLSKEELLSFLVGLSLPSNLKYVKV FT CRELHQNGEPHLHVLLQFAGKITITDNRLFDHVHPSRSACFHPNIQSAKSSTDVKSYLD FT KDGDTVEWGKFQIDGRSSRGGQQTANDAYATALNMSNKGEAMSVIKELAPKDFVLHYHN FT IKSNLDRIFEEPVAPFVCPFPMSSFTLLPPELVDWASTNVCSSAARTWRPKSIVVEGES FT RTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHLKEFMGAQRDWQ FT SNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEFLEEEKNYALKEWADKNAEFVFLTEPLF FT STEHQDQTQTRQKEDDSTTTH" FT CDS complement(2329..2472) FT /codon_start=1 FT /product="AC4" FT /db_xref="UniProtKB/TrEMBL:A2THE2" FT /protein_id="AFQ00064.1" FT /translation="MGNLISMCSCSSPERSPSQTIASSIMYTQAVAPVSTPTYKALSPV FT QT" XX SQ Sequence 2753 BP; 702 A; 624 C; 680 G; 747 T; 0 other; accggatgcc cgcggagccc aaaagatgac cccacaggac acgtgcacca ataaaattgc 60 gtgctttgag gtaagttagc tggaaatggg gttttgaaag cgacaagtca tacgagtcct 120 atttatactg ctgctgcgga tcaacttttg tcagtatgtg ggatccattg cttaatgact 180 ttcccgagtc ggttcacggc tttcggtgta tgctagctgt caagtacttg caggccgttg 240 aatcgaccta cgagcccaat actttgggcc acgaattgat ccgcgatctg atccttgtcc 300 tccgggcccg tgattatggc gaagcgaaca ggagatattc tcatttccac tcccgtttcg 360 aaggttcgtc gaaaactgaa cttcgacagc ccctacatga gccgtgctct tgcccccact 420 gtcctcgtca caagcaagcg tcgacaatgg gccaacaggc ccatgtatcg aaagcccagg 480 atgtacagga tgtatcgaag cccagatgtc cctaagggct gcgaaggccc gtgcaaagtt 540 cagtcgtacg aacaacgaga cgacgttaaa cacaccggta tcgtccggtg tgtcagtgat 600 gttactagga ggagtggaat cactcatcgt gtcggaaaaa ggttttgtgt gaagtctata 660 tatattcttg gcaagatctg gatggatgag aacataaaaa aacaaaatca tacgaatcag 720 gtcatgttct ttcttgttcg tgatcgtcgt ccatatgggt ccagtccaat ggacttcgga 780 caggttttta atatgttcga caacgagccc agcactgcga cagttaagaa cgatcttcgc 840 gatcgtttcc aagttatgcg aaagtttcat gccaccgtgg tcggtggccc ctctgggatg 900 aaggagcagg cgctggtaaa acgcttctat cgtgtgtaca atcatgtggt atacaaccac 960 caagagactg cgaagtatga gaatcatact gagaatgcga tgttattgta tatggcgtgt 1020 acacacgcat cgaatcctgt gtatgcaaca ttgaaaattc gtatatactt ttatgactca 1080 gttacgaatt aataaagatc gaattttatt acgtgatttt cttgtacatc gattgtccca 1140 acaaggacat tttccaatac atgacttacg gccctaacaa ccaaatttag actaattaca 1200 cctaacatat cgaggtattt tagaacctgc gttctaaata cccttaagaa acgaccagtc 1260 tgaggccgta aagtcgtcca gattcggaag ttcaggaaag ctttgtgaat ccccaacgcc 1320 ctccgaaggt tgtggttgaa tcgtatttgc atgtgtatta tgtcgtgacg gcaaagaaag 1380 gggcgttggt ggtgatctat tatcgtgaaa tatagggggt tgtttatctt ccaggtaaac 1440 acgccattcc atgcttgatc cgcagtaatg tattccccgg tgcgagaatc catgattctg 1500 gcacgagata tgcaggtaat atgagcaacc gcactttaga tcaatgcgtc gtcgtcgaat 1560 cgtcttcttt ttggcgagtc tgtgtctgat cttgatgctc ggttgagaag agaggttctg 1620 tgaggaagac gaattcggca ttcttgtccg cccactcttt tagtgcatag ttcttctcct 1680 cctctagaaa ctctttatac gaagaagatg ggcccggatt gcaaaggaag atagtgggaa 1740 ttccgccttt aatttgaatc ggctttccgt atttcgtgtt gctttgccaa tcacgctggg 1800 cccccatgaa ctcttttaag tgctttagat aatgcgggtc gacgtcatca atgacgttgt 1860 accacgcatc gttgctgtat atctttggac tcaggtcaag gtgaccacat aggtaattat 1920 gtggtcctaa tgatcgggcc cacatcgtct ttcccgtacg actctcaccc tctaccacga 1980 tactcttagg tctccacgtc cgcgcagcgg aagagcaaac gttcgttgat gcccaatcaa 2040 cgagctcagg cggtagcaac gtgaaagacg acatcggaaa cggacaaacg aaaggagcca 2100 caggttcttc gaagattcga tccaaatttg acttgatatt gtggtagtga aggacgaagt 2160 ccttcggtgc gagctccttg atcacagaca tagcctcccc tttattactc atgttaagcg 2220 ccgtggcgta ggcgtcgtta gctgtctgtt gtccacccct tgaagatcga ccgtcgattt 2280 gaaacttgcc ccactcgacg gtgtcgccgt ccttgtccag gtaagacttc acgtctgtac 2340 tggacttagc gctttgtatg ttggggtgga aacaggcgct acggcttggg tgtacatgat 2400 cgaagaggcg attgtctgtg atggtgatct ttccggcgaa ctgcaggagc acatggagat 2460 gaggttcccc attctggtgc agttctctgc acaccttgac gtattttagg ttcgacggaa 2520 gggagaggcc gactaaaaag gaaagtagct cttctttgga tagagagcat ctgggatatg 2580 tgaggaaaat gtttttcgct tggattctaa aacgcggagg cctcatgttg accagtcaat 2640 tggagacacc ccccagatca ctaacccctg tatattggag actggagaca atttttagaa 2700 gtagtaagag gtactactag gattttgaca cgtagcgggc atcctataat att 2753 //