ID JX131282; SV 1; circular; genomic DNA; STD; VRL; 2619 BP. XX AC JX131282; XX DT 26-AUG-2012 (Rel. 113, Created) DT 26-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Squash leaf curl virus segment DNA-B, complete sequence. XX KW . XX OS Squash leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2619 RA Anfoka G.H., Haj Ahmad F.W., Adwan H.J., Abu Mallouh S.A., Al-Taleb M.M., RA Odeh W.H.; RT "Sinapis arvensis is a natural host of five begomoviruses in Jordan"; RL Unpublished. XX RN [2] RP 1-2619 RA Anfoka G.H., Haj Ahmad F.W., Al-Taleb M.M.; RT ; RL Submitted (03-JUN-2012) to the INSDC. RL Department of Biotechnology, Faculty of Agricultural Technology, Al-Balqa' RL Applied University, Al-Salt 19117, Jordan XX DR MD5; f306c449a0587e8f0ae8c8513e8ae18d. XX CC GenBank Accession Numbers JX131281-JX131282 represent the complete CC genome of Squash leaf curl virus. CC ##Assembly-Data-START## CC Assembly Method :: CLC Main Workbench v. 6.6.2 CC Coverage :: complete CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2619 FT /organism="Squash leaf curl virus" FT /segment="DNA-B" FT /mol_type="genomic DNA" FT /country="Jordan" FT /isolation_source="Sinapis arvensis" FT /collection_date="2011" FT /db_xref="taxon:10829" FT CDS 642..1217 FT /codon_start=1 FT /product="BV1" FT /db_xref="GOA:J7HK14" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:J7HK14" FT /protein_id="AFQ00056.1" FT /translation="MQGRLPNVVLNTQVEPRMTTQRVQENQFGPEFVLSQNSALSTFVT FT YPSYVKSVPNRTRTYIKLKRLRFKGTLKIERGQGDTIMDGPISNIEGVFSMVIVVDRKP FT HVSQSGRLHTFDELFGARIHCHGNLSVVPALKDRYYIRHVTKRVVSLEKDTLLIDLHGT FT THLSNKRYNCWASFSDLERDSFNGVTVT" FT CDS complement(1485..2366) FT /codon_start=1 FT /product="BC1" FT /db_xref="GOA:J7HDP3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:J7HDP3" FT /protein_id="AFQ00057.1" FT /translation="MGSQLVPPPSAFNYIESQRDEFQLSHDLTEIVLQFPSTASQITAR FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDSNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILA FT KQFSEKDIDFWHVGYGKWERRLVKSASSSRFGLRGPIEINPGESWATKSVIGPTNRNAD FT LDIEEELLPYRELNRLGTNILDPGESASIVGIQRSQSNITMSMSQLNELVRSTVHECIK FT TSCIPSTTKSLS" XX SQ Sequence 2619 BP; 699 A; 547 C; 573 G; 800 T; 0 other; accggatggc cgcccgattt ttggtgtccg cctctttagc ccacggccca ggcccatgtt 60 aagcaaattg ggccgacgtt tgatccgttt aagccgcgcg ccttcttcct ctagggacca 120 cacagcactt tcgaccaatc acgttgttat tgacaaacct atttggtatg gatcgtacga 180 catgtgtgga ccactgtcac atggtgctgt gtcagacgct cgactttaat tcaaattggc 240 taagtgatta tcttcgtctt taatttgtac tgtcacagag tgttggacca tctctgtgca 300 ctatcgacga tgtccttttg ttctatggac ctcgttctgt caatttgaat taatctttag 360 tgctaccaat tacagtttag ctacagagac tagttattgt tcatggattg gttcttcgtc 420 tattaataat tgaaacgtgt aattggctta tgcgtcgaat tcatatatta gacaacacgt 480 gtattattta cacgtatata cgttgtacag tatctctatc atcgttctag atgtattcga 540 cgagcaatag acggggtcga tcgcaaactc agcgaggttc tcatgtacgc cgtacaggtg 600 tcaagcgttc atatggtgca gccaattaaa gcttagtggt tatgcaaggc cgtctaccca 660 acgtggtatt aaatactcaa gttgaaccaa gaatgactac acagcgtgtt caagagaacc 720 agtttggccc agaatttgtc ttgagtcaaa actcagcgtt gtccacgttt gtaacatatc 780 ctagctatgt taagtctgtt cccaatcgca caagaacgta tataaaattg aaacgactgc 840 gttttaaggg aactctgaaa attgaacgtg gacaaggtga cactattatg gacgggccca 900 tttctaatat tgaaggagta ttttctatgg tcatcgtggt tgatcggaaa ccacatgtta 960 gtcaatctgg ccgtctacat acatttgatg agttgtttgg cgcgcgtatc cattgtcacg 1020 gtaatttatc tgtcgtacct gctttgaagg accgttacta cattagacac gttacgaagc 1080 gtgtggtgtc tcttgaaaag gacacgttac tgattgatct ccatggtacg acacatctgt 1140 ctaacaagcg ttataattgt tgggcatcgt tcagtgatct tgaacgggat tcatttaatg 1200 gcgttacggt aacataacta agaacgctct gttagtgtat tactgttggc tgtcggatgc 1260 ccagtccaag gcatcaacat atgtatcgtt tgaactggac tatttgggat gattaagatt 1320 aataaattgc acaagtcccg caattaaata agaactaaat actgaacagg gctgtttatt 1380 ctactattaa aaatggccgc gcagcgcaac actctccaaa acatgatgag cgataacatt 1440 aacaactaat atgagcgtaa agcgaactaa taatttaatt ggcattagct tagggatttt 1500 gtagtgctcg ggatacaact ggttttaatg cactcatgta cagtggatct aactaattcg 1560 ttcaactgtg acattgacat ggtgatgttc gattgcgacc gttgtattcc gactattgaa 1620 gctgattccc caggatctaa gatgttagtt cccaacctgt ttagttccct gtatggaagc 1680 agctcttctt caatatctaa atccgcattt ctgttagttg ggcctattac actctttgtg 1740 gcccaagatt cacctggatt aatttcaatt gggcctctta gcccaaatct agatgacgat 1800 gcggatttga ccagtcttct ctcccacttg ccgtatccca cgtgccagaa atcaatgtcc 1860 ttttcgctaa attgttttgc aagtatcttt actgtcggtg cccggaaagg gatatcaacg 1920 gagtgcttcg ccgacgatag cttcagtttg cccttgaatt tagcgaaatg cgtcatttga 1980 tgcacattcg agtctgagac tcgatagtat aacttccatg ggattgggtc ttttagagag 2040 aagaacgatg atgaaaaata gtggagatct atgttacatc ttatcggaaa agtccacgac 2100 gcttgcagcg attcattgtc cgtcatgcgt ttgtcgtgaa tctccactat taccgtaccc 2160 gatgcgttaa tcggaacctg ttgccgatat tctatgacgc agtggtcgat tttcatacaa 2220 ctacgactca gcctcgctgt tatctgtgat gccgtcgagg gaaattgcag aacaatttcc 2280 gttaggtcgt gcgataactg aaattcgtcc ctctgcgatt caatataatt aaatgcgctt 2340 gggggtggaa ctaattgaga acccattagc tcttgtaata actgaacaag caatttaaat 2400 caggaatcgc actggaaaat gtgagttcag gatagatata tgcggaacga agtgagttag 2460 ggtttgagtg gtatatttcg taaatatgcg tcgggacacc aggaggtgtc ctctcaactt 2520 tctcatattg ctggtgtcct ggtgtcctat atatacctca agacacataa agcctctagg 2580 ggacaccaag gggcaaaatc ggccatccgc aataatatt 2619 //